BAC Information

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BAC

Clone NameB6Ng01-179D02
Chromosome7 (Build37)
Map Location 104,936,284 - 104,937,190
singlet/doubletsinglet
Overlap genenone
Upstream geneOdz4, Nars2, Gab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594
Downstream genePak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179D02.bB6Ng01-179D02.g
ACCGA005982GA005983
length882910
definitionB6Ng01-179D02.b B6Ng01-179D02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttatctttccagacttttatcatgaatgggtgttggattttgt
caaatgctttcttagcatctaatgagatgatcatgtggtttttgtctttg
agtttgtttatatagtgaattacattgatgaattttcgtatattaaacca
tacctgcatccctgggatgaagcctacttgatcatgatagataatcattt
tgatgtgttcctggattcagcttgcaaggattttattgagtatttcttca
ttgatattcttaaggggaattggtctgaagttctctttctttgttggatc
tttgtgtggtttaggtatcagagtaattgtggcttcatagaatgaattgg
ataaagtaccttctgtttctattttgtgaaatagtttgaagagagttgga
attaggtcttctttgaaggtctgataaacctctgcactaaactcagctgg
tcctgggcttttttttttttttttggttgggagactattaatgactactt
ctttttctttaggggaaatggaacagtttagatcattaatctgatcctga
tttaactttggtacctggtatctgtctaggaagttgtccatttcatccag
gtttttcagttttgttgagtatagccttttgtagtaggatctgatgatat
tttggattttctcaggttctgttgttatgtctcctttttcatttctgatt
ttgataatcagaatactgtccctgtgccttctagtttagtctgactaagg
gtttatctatcttattgatttttctcaaaaaaaaaaaaaaaaacagctcc
ctggtttggttggattcttcgaatagtccttttggttcccacttgggtga
attccaccctgaagttttaatcatacccgcca
gaattcaacttaacttggatatctggtgtgtgaaataaggctctgagttt
tggctcagagtaatttgtctcggttttggatgtactgaatttgaggtata
gcaggacaggcaagtgatgaatgccattttacaggtattgagaaaaacag
aatctgagctcaggtaaaaggtttgcgtcaaaaatagcctcagtggtggg
agaagagcagactttttatttcaacctgagtccagtatagcttaaaagtc
tccactatttcttccccagcccttaccctaattctcagacctctaacccc
aagacaaacagaagagtagatgtctgggtccgacgtgacgtgagatcaga
cagttttcacactttcagctcttggtgacgagcccagggatgccaagatg
ctttatattcaaggggccacccgcattccactctgacttcacattaacca
tctgacagagcatccacatttcagggaaaaggccgcttcaaagagggaga
ccgcgacagctcacagcagacgcccgggcccaatgacgtcacgcggcagc
caggtgattccctagcctctggcgtcaagtgctgatgacgtcatcccggc
gccccacctcgccccctggccgtgttggcctggttcacgtgggtctgtcc
ggcgctccccgccccctcccacctgcggggggcggaggccgggcagaggg
ggcgggcccgaacgaaggaggcgtggcttgggcggggtcgtagggcgcgg
cggccgccagcccggctacatacaatagcaaggctgcgaccggggccgaa
ggtaccgccgcaacggtggcacttcctcgccgctgccctacacctccccg
tcccacttgcacttctaggctgcgcgaagtcctgtccgcttatcacctgc
ttttcgcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104936284_104937190
seq2: B6Ng01-179D02.g_65_974

seq1  GAATTCAACTTAACTTGGATATCTGGTGTGTGAAATAAGGCTCTGAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTAACTTGGATATCTGGTGTGTGAAATAAGGCTCTGAGTTT  50

seq1  TGGCTCAGAGTAATTTGTCTCGGTTTTGGATGTACTGAATTTGAGGTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGAGTAATTTGTCTCGGTTTTGGATGTACTGAATTTGAGGTATA  100

seq1  GCAGGACAGGCAAGTGATGAATGCCATTTTACAGGTATTGAGAAAAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACAGGCAAGTGATGAATGCCATTTTACAGGTATTGAGAAAAACAG  150

seq1  AATCTGAGCTCAGGTAAAAGGTTTGCGTCAAAAATAGCCTCAGTGGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAGCTCAGGTAAAAGGTTTGCGTCAAAAATAGCCTCAGTGGTGGG  200

seq1  AGAAGAGCAGACTTTTTATTTCAACCTGAGTCCAGTATAGCTTAAAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGCAGACTTTTTATTTCAACCTGAGTCCAGTATAGCTTAAAAGTC  250

seq1  TCCACTATTTCTTCCCCAGCCCTTACCCTAATTCTCAGACCTCTAACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTATTTCTTCCCCAGCCCTTACCCTAATTCTCAGACCTCTAACCCC  300

seq1  AAGACAAACAGAAGAGTAGATGTCTGGGTCCGACGTGACGTGAGATCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAACAGAAGAGTAGATGTCTGGGTCCGACGTGACGTGAGATCAGA  350

seq1  CAGTTTTCACACTTTCAGCTCTTGGTGACGAGCCCAGGGATGCCAAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCACACTTTCAGCTCTTGGTGACGAGCCCAGGGATGCCAAGATG  400

seq1  CTTTATATTCAAGGGGCCACCCGCATTCCACTCTGACTTCACATTAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTCAAGGGGCCACCCGCATTCCACTCTGACTTCACATTAACCA  450

seq1  TCTGACAGAGCATCCACATTTCAGGGAAAAGGCCGCTTCAAAGAGGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGAGCATCCACATTTCAGGGAAAAGGCCGCTTCAAAGAGGGAGA  500

seq1  CCGCGACAGCTCACAGCAGACGCCCGGGCCCAATGACGTCACGCGGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGACAGCTCACAGCAGACGCCCGGGCCCAATGACGTCACGCGGCAGC  550

seq1  CAGGTGATTCCCTAGCCTCTGGCGTCAAGTGCTGATGACGTCATCCCGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGATTCCCTAGCCTCTGGCGTCAAGTGCTGATGACGTCATCCCGGC  600

seq1  GCCCCACCTCGCCCCCTGGCCGTGTTGGCCTGGTTCACGTGGGTCTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACCTCGCCCCCTGGCCGTGTTGGCCTGGTTCACGTGGGTCTGTCC  650

seq1  GGCGCTCCCCGCCCCCTCCCACCTGCGGGGGGCGGAGGCCGGGCAGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTCCCCGCCCCCTCCCACCTGCGGGGGGCGGAGGCCGGGCAGAGGG  700

seq1  GGCGGGCCCGAACGAAGGAGGCGTGGCTTGGGCGGGGTCGTAGGGCGCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGCCCGAACGAAGGAGGCGTGGCTTGGGCGGGGTCGTAGGGCGCGG  750

seq1  CGGCCGCCAGCCCGGCTACATACAATAGCAAGGCTGCGACCGGGGCCGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCGCCAGCCCGGCTACATACAATAGCAAGGCTGCGACCGGGGCCGAA  800

seq1  GGTACCGCCGC-ACGGTGGGCAC-TCCTCGCCGCTGCCCTACACCTCCCC  848
      ||||||||||| ||||| ||||| ||||||||||||||||||||||||||
seq2  GGTACCGCCGCAACGGT-GGCACTTCCTCGCCGCTGCCCTACACCTCCCC  849

seq1  GTCCCAC-TGCACCTCTAGGCTGCGCGGAGTCCTGTCCGC-TATCACCGG  896
      ||||||| ||||| ||||||||||||| |||||||||||| ||||||| |
seq2  GTCCCACTTGCACTTCTAGGCTGCGCGAAGTCCTGTCCGCTTATCACCTG  899

seq1  CTTTTCGCAGT  907
      |||||||||||
seq2  CTTTTCGCAGT  910