BAC Information

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BAC

Clone NameB6Ng01-180B10
Chromosome7 (Build37)
Map Location 71,176,973 - 71,178,072
singlet/doubletsinglet
Overlap genenone
Upstream geneChrna7, Otud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik
Downstream geneTrpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180B10.bB6Ng01-180B10.g
ACCGA006620GA006621
length1,100981
definitionB6Ng01-180B10.b B6Ng01-180B10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttactatatgtaaaattaagaattatatttataaaccatgagct
caacattttgcctttcccacagtgagagaggaccttagcctttggagctc
tggccctgcacttggtgagatgtttccctgagggttgctctatcaaagct
gtgactgtctcagccacacgacatgctattatcaccaagtttcaacccac
ttcttttcatttatcctcacggagcctattaggccttcaatccttctact
tcaggcctgcctttaggatcgcttttctcgtcaggaagaaaagatgtaaa
ctctgtgctctctgtctcgccctcttctcacaagctctcttctctgcagc
tctacagtggtgcttactttcaggccctgacagctgcaccctatgccccc
tgtatttatcatcaccccttgaatacctggtctggtgtctttggctgatg
tccaacatggcttctcagtcaccctcctgactcagttgtaccctgagggt
gccagccttcatgtgcacaggacctccaccctgactccttcctgggtggc
ctgggagacttgattgttccttaagaccaacagtggttcggaggcccaag
cattcctgtcttttctaatgaacatattccacaggatgctgtggactgtt
gagtaagttatgtgctcccaggagtctccagtccagtatgcaggtggctt
gtgaagttaaggttgtctgtttctctaattgatactaagattctacatgg
gcaacacattagtgtctggggccccttgttggggtgagagttggggacat
gacagtgccagtagactcagcaggatttcttgggctctgaggacctgctc
tttgaccagaatccctgagaggctcctaggaaactcacccagtggacatc
tgcctggagttctgtggcaggcttggatccagtcctaccttttgctctgc
tctgtcctctactgtccagtgatgacactcaggatgaaaaccagcacaga
aaggacatggcggctgccagcttggcttcttgcttcccctggctccaggg
ctatgggggagtctggcaggctgcgttgccgggaaaacacatgttttggg

gaattcccagtgcccacctggtggctcacaactgtctgtaattccagttt
cagaggatctgacaccttcacgtaaacatacatgcaggcaaaacaccaat
gcacatgaaatataaataaattattatttttttaaaaatctttgattctg
aattaggaaaattacaagaggcaattaagagtggctagatgagggagcag
ttggaagattgacccacaccattggtggtttctcaggttatctggttctc
ctggggatgactaaataaaagcacagatactttcccaactgggagacaat
aagatcttcagaaattaaaaattcaggcttttggcttctctaaggcaaaa
aacactgtcaataagacaaaaaggccaccaacagattgggaaaggatctt
taacaatcctaaatcagatagaggactaatatccaatatatataaagaac
tcaaaaagatggactccagaaattcaaataaccctattaaaaatggggta
cagagctaaacaaagaattctcaactgaggaataccaaatggctgagaag
cacctgaaaaaaatgttcaacatccttaatcatcagggaaatgcaaatca
aaacaaccctgagattccacctcacaccagtcagaatgactaagatcaaa
aattcaggtgacagcagatactggcgaggatgtggagaaagagggacact
cctccattgttggtgggattgcaagcttgtacaaccactttggaaatcag
tctggaggggggggtatccctcagaaaattggacgtagtattaccagaaa
gatccagcaatacctctcttggggcatatacccaggagatgttccaactg
gtaataaaggacacatgcgacactatgttcatagcagccttatttataat
acccagaagctagaaagaacccagatgcccctcaacagaggatggataca
gaaaatgtgggaacatttacacaatggagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_71176973_71178072
seq2: B6Ng01-180B10.b_45_1144

seq1  GAATTCTTACTATATGTAAAATTAAGAATTATATTTATAAACCATGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTATATGTAAAATTAAGAATTATATTTATAAACCATGAGCT  50

seq1  CAACATTTTGCCTTTCCCACAGTGAGAGAGGACCTTAGCCTTTGGAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTTGCCTTTCCCACAGTGAGAGAGGACCTTAGCCTTTGGAGCTC  100

seq1  TGGCCCTGCACTTGGTGAGATGTTTCCCTGAGGGTTGCTCTATCAAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGCACTTGGTGAGATGTTTCCCTGAGGGTTGCTCTATCAAAGCT  150

seq1  GTGACTGTCTCAGCCACACGACATGCTATTATCACCAAGTTTCAACCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTCTCAGCCACACGACATGCTATTATCACCAAGTTTCAACCCAC  200

seq1  TTCTTTTCATTTATCCTCACGGAGCCTATTAGGCCTTCAATCCTTCTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCATTTATCCTCACGGAGCCTATTAGGCCTTCAATCCTTCTACT  250

seq1  TCAGGCCTGCCTTTAGGATCGCTTTTCTCGTCAGGAAGAAAAGATGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCTGCCTTTAGGATCGCTTTTCTCGTCAGGAAGAAAAGATGTAAA  300

seq1  CTCTGTGCTCTCTGTCTCGCCCTCTTCTCACAAGCTCTCTTCTCTGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCTCTCTGTCTCGCCCTCTTCTCACAAGCTCTCTTCTCTGCAGC  350

seq1  TCTACAGTGGTGCTTACTTTCAGGCCCTGACAGCTGCACCCTATGCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGTGGTGCTTACTTTCAGGCCCTGACAGCTGCACCCTATGCCCCC  400

seq1  TGTATTTATCATCACCCCTTGAATACCTGGTCTGGTGTCTTTGGCTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTATCATCACCCCTTGAATACCTGGTCTGGTGTCTTTGGCTGATG  450

seq1  TCCAACATGGCTTCTCAGTCACCCTCCTGACTCAGTTGTACCCTGAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACATGGCTTCTCAGTCACCCTCCTGACTCAGTTGTACCCTGAGGGT  500

seq1  GCCAGCCTTCATGTGCACAGGACCTCCACCCTGACTCCTTCCTGGGTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTTCATGTGCACAGGACCTCCACCCTGACTCCTTCCTGGGTGGC  550

seq1  CTGGGAGACTTGATTGTTCCTTAAGACCAACAGTGGTTCGGAGGCCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGACTTGATTGTTCCTTAAGACCAACAGTGGTTCGGAGGCCCAAG  600

seq1  CATTCCTGTCTTTTCTAATGAACATATTCCACAGGATGCTGTGGACTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGTCTTTTCTAATGAACATATTCCACAGGATGCTGTGGACTGTT  650

seq1  GAGTAAGTTATGTGCTCCCAGGAGTCTCCAGTCCAGTATGCAGGTGGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGTTATGTGCTCCCAGGAGTCTCCAGTCCAGTATGCAGGTGGCTT  700

seq1  GTGAAGTTAAGGTTGTCTGTTTCTCTAATTGATACTAAGATTCTACATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTTAAGGTTGTCTGTTTCTCTAATTGATACTAAGATTCTACATGG  750

seq1  GCAACACATTAGTGTCTGGGGCCCCTTGTTGGGGTGAGAGTTGGGGACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACATTAGTGTCTGGGGCCCCTTGTTGGGGTGAGAGTTGGGGACAT  800

seq1  GACAGTGCCAGTAGACTCAGCAGGA-TTCTT-GGCTCTGAGGACCTGCTC  848
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  GACAGTGCCAGTAGACTCAGCAGGATTTCTTGGGCTCTGAGGACCTGCTC  850

seq1  TTTGACCAGAATCCCTGAGAGGCTCCTAGGAAACTCACCCAGTGGACATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCAGAATCCCTGAGAGGCTCCTAGGAAACTCACCCAGTGGACATC  900

seq1  TGCCTGGAGTTCTGTGGCAGGCTGGGATCCAGTCCTAACTTTTGCTCTGC  948
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  TGCCTGGAGTTCTGTGGCAGGCTTGGATCCAGTCCTACCTTTTGCTCTGC  950

seq1  TCTGTCCTCTACTGTCCAGTGATGACACTCAGGATGAAAACCAGGCACAG  998
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTGTCCTCTACTGTCCAGTGATGACACTCAGGATGAAAACCA-GCACAG  999

seq1  AAAGGACATGGCGGCTGCCAGCTGGGCTCCTTGCTCCCCCTGGGCTTCCA  1048
      ||||||||||||||||||||||| |||| |||||| |||||||   ||||
seq2  AAAGGACATGGCGGCTGCCAGCTTGGCTTCTTGCTTCCCCTGG--CTCCA  1047

seq1  GGGCTAT-GGGGAG-CTGGCAGGCTGCGGTGCCGGGAAAACACATTGTTT  1096
      ||||||| |||||| ||||||||||||| ||||||||||||||||  |||
seq2  GGGCTATGGGGGAGTCTGGCAGGCTGCGTTGCCGGGAAAACACATGTTTT  1097

seq1  GGGG  1100
      ||| 
seq2  GGG-  1100