BAC Information

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BAC

Clone NameB6Ng01-180L05
Chromosome7 (Build37)
Map Location 68,319,586 - 68,417,621
singlet/doubletdoublet
Overlap geneD0Kist2, LOC100041259
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, LOC100041248
Downstream geneEG664943, B230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180L05.bB6Ng01-180L05.g
ACCGA007062GA007063
length1,158699
definitionB6Ng01-180L05.b B6Ng01-180L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,319,586 - 68,320,735)(68,417,045 - 68,417,621)
sequence
gaattctcttgtcacaatatttgtctaagtgaataaaagcacgtggtttt
tgccctacaggaatgaacatttaatctaataaggattcttatatgctcca
ttaacttctcaagccattattgcatttgctgccatgtcttgatctttaac
ttccactctgaaacatggaaatccacaagtgcttttgaatttgaagttta
attttctctagtacagttagtgatttgtcctggtattttaggttctaact
cccagtgatgggattttggggctactgctagttttatttttccaagtcaa
atatacaaataaaccaacttcctctgtaacaggaatgttctttttttttt
ttttatgtctggaagtcaaccaataaatgtgaaaacagcctttactgatg
aagacatgtcaatagccttggtagccacaacaatgatagaaaattgaacc
actgttatcattgacatttacaattcaaaaacctctaaaatgtatcttct
tttattctttgtttatattttaatatttaaagacaaagactattttagca
tttctgaaaactttgttaggtttcacttcggcatcataccacttaaggta
ccaagtattctacagcaaaccctgtcctttgtgtcccttgtgaactaata
ttttatgactataaatgagtctccaaatctgaaaaaaactcagatattgt
cctcgtgaaaaacaaacaacaaaagcctcactgtgaacagcaacgacaga
acaatgatgcaaaaggctgagcaactacccctatagaggtactgcagaga
aaataaatttggtgaattactttataatccatcttcgttttgatcatttt
caaaatataatagctagtcagattttaacattaaataaagctagaacatg
tgtaaatttgatctgttagcatcaatctcttcaacctattaatattggaa
aaaatgcatgactatgcgcacttacttaattaaggtgtgtaaacctttca
gtcattcttcctctgagtcattttctttccattttctagagcttttccaa
caggagctcttcttgtcattacttcaatcagtaatggatttgattaggaa
tgtgactctgctgcctgctattttctgatatataaatttgcttctaatgc
atccaccc
gaattcaactgggttctgggtggtcctgcccctcacatactcctcctcac
tagtgctcttgaaagtaggctctatttctcacctgtttcagcacttggcc
gattgggctcttgccattcccaggccataacagtgaagaggacctttttc
tggggggggggggtcaatttggagagcatgaatgtgagagggtttacatg
gtctagtcttctatgggtggccctgggaaggaagtgatgtctccatttcc
aattatggttggcaaatactgcagttgggaaaagtagcctcagaattaca
agagtgggagaactggctttgcctcttacaggctacagcatttggaagag
tttgttctgagccttgactgggcatggcagcagagtatagctcgctcttg
agtcatgcttgtggttgacccatacttgtgagctgaatatattaaaaaat
aaaaatgaagaagataaagagaaggataaggaagtggaacagaaggagga
gatggagcaggaggaggaggaggaagaaaaagatgaagaagaagaagaag
aataagaagaagaagaagaataataagaagaagaataagatgaagatgaa
gaagatgaagaagaaaagaatttctccttaccactggcattagggatttc
ctgctcttttattattccatgccctgtggggtctattagcatgtaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68319586_68320735
seq2: B6Ng01-180L05.b_42_1199

seq1  GAATTCTCTTGTCACAATATTTGTCTAAGTGAATAAAAGCACATGGTTTT  50
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAATTCTCTTGTCACAATATTTGTCTAAGTGAATAAAAGCACGTGGTTTT  50

seq1  TGCCCTACAGGAATGAACATTTAATCTAATAAGGATTCTTATATGCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTACAGGAATGAACATTTAATCTAATAAGGATTCTTATATGCTCCA  100

seq1  TTAACTTCTCAAGCCATTATTGCATTTGCTGCCATGTCTTGATCTTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTCTCAAGCCATTATTGCATTTGCTGCCATGTCTTGATCTTTAAC  150

seq1  TTCCACTCTGAAACATGGAAATCCACAAGTGCTTTTGAATTTGAAGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTCTGAAACATGGAAATCCACAAGTGCTTTTGAATTTGAAGTTTA  200

seq1  ATTTTCTCTAGTACAGTTAGTGATTTGTCCTGGTATTTTAGGTTCTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTAGTACAGTTAGTGATTTGTCCTGGTATTTTAGGTTCTAACT  250

seq1  CCCAGTGATGGGATTTTGGGGCTACTGCTAGTTTTATTTTTCCAAGTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGATGGGATTTTGGGGCTACTGCTAGTTTTATTTTTCCAAGTCAA  300

seq1  ATATACAAATAAACCAACTTCCTCTGTAACAGGAATGTTCTTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAATAAACCAACTTCCTCTGTAACAGGAATGTTCTTTTTTTTTT  350

seq1  TTTTATGTCTGGAAGTCAACCAATAAATGTGAAAACAGCCTTTACTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTCTGGAAGTCAACCAATAAATGTGAAAACAGCCTTTACTGATG  400

seq1  AAGACATGTCAATAGCCTTGGTAGCCACAACAATGATAGAAAATTGAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGTCAATAGCCTTGGTAGCCACAACAATGATAGAAAATTGAACC  450

seq1  ACTGTTATCATTGACATTTACAATTCAAAAACCTCTAAAATGTATCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATCATTGACATTTACAATTCAAAAACCTCTAAAATGTATCTTCT  500

seq1  TTTATTCTTTGTTTATATTTTAATATTTAAAGACAAAGACTATTTTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTTTGTTTATATTTTAATATTTAAAGACAAAGACTATTTTAGCA  550

seq1  TTTCTGAAAACTTTGTTAGGTTTCACTTCGGCATCATACCACTTAAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAAACTTTGTTAGGTTTCACTTCGGCATCATACCACTTAAGGTA  600

seq1  CCAAGTATTCTACAGCAAACCCTGTCCTTTGTGTCCCTTGTGAACTAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTATTCTACAGCAAACCCTGTCCTTTGTGTCCCTTGTGAACTAATA  650

seq1  TTTTATGACTATAAATGAGTCTCCAAATCTGAAAAAAACTCAGATATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGACTATAAATGAGTCTCCAAATCTGAAAAAAACTCAGATATTGT  700

seq1  CCTCGTGAAAAACAAACAACAAAAGCCTCACTGTGAACAGCAACGACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGAAAAACAAACAACAAAAGCCTCACTGTGAACAGCAACGACAGA  750

seq1  ACAATGATGCAAAAGGCTGAGCAACTA-CCCTATAGAGGTACTGCAGAGA  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAATGATGCAAAAGGCTGAGCAACTACCCCTATAGAGGTACTGCAGAGA  800

seq1  AAATAAATTTGGTGAATTACTTTATAATCCATCTTCGTTTTGATCATTTT  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAATAAATTTGGTGAATTACTTTATAATCCATCTTCGTTTTGATCA-TTT  849

seq1  TCAAAATATAATAGCTAGTCAGATTTTAACATTAAATAAAAGCTAGAACA  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAAAATATAATAGCTAGTCAGATTTTAACATTAAAT-AAAGCTAGAACA  898

seq1  TGTGTAAATTTGATCTGTTAGCATCAATCTCTTCAACCTATTAATATTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAATTTGATCTGTTAGCATCAATCTCTTCAACCTATTAATATTGG  948

seq1  AAAAAATGCAATGACTATGCGGCACTTACTTAATT-AGGTGTGTAAAACC  998
      ||||||||| |||||||||| |||||||||||||| ||||||||||| | 
seq2  AAAAAATGC-ATGACTATGC-GCACTTACTTAATTAAGGTGTGTAAACCT  996

seq1  TTCAGTCATTCT--CTCTGAGTCATTTCCTTTCCATTTTCTAGAGC-TTT  1045
      ||||||||||||  ||||||||||||| |||||||||||||||||| |||
seq2  TTCAGTCATTCTTCCTCTGAGTCATTTTCTTTCCATTTTCTAGAGCTTTT  1046

seq1  CCAACA-GAGCTCT--CTGTCATTAC-TCCATCAGTAATTGATGTGA-TA  1090
      |||||| |||||||   ||||||||| || ||||||||| ||| ||| ||
seq2  CCAACAGGAGCTCTTCTTGTCATTACTTCAATCAGTAATGGATTTGATTA  1096

seq1  G--ATGTGGCTCCTGCTGCTTGCTA-TTTCTGTATATA-AAATTTGCTTC  1136
      |  ||||| || ||||||| ||||| |||||| ||||| |||||||||||
seq2  GGAATGTGACT-CTGCTGCCTGCTATTTTCTG-ATATATAAATTTGCTTC  1144

seq1  TAATGCATCCACCC  1150
      ||||||||||||||
seq2  TAATGCATCCACCC  1158

seq1: chr7_68417045_68417621
seq2: B6Ng01-180L05.g_195_768 (reverse)

seq1  ACCTTGACATGCTAATAGACCCCACA-GGCATGGACTAATGAAAGAGCAG  49
      ||||| |||||||||||||||||||| |||||||| |||| |||||||||
seq2  ACCTT-ACATGCTAATAGACCCCACAGGGCATGGAATAATAAAAGAGCAG  49

seq1  GAAATCCCTTATGCCAGTGGTAAGGAGAATTCTTCTTCTTCTTCTTCTTC  99
      ||||||||| |||||||||||||||||||   ||||| ||||||||| ||
seq2  GAAATCCCTAATGCCAGTGGTAAGGAGAA--ATTCTT-TTCTTCTTCATC  96

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  149
      |||||| ||||| |||| ||||||||||| || |||||||||||||||||
seq2  TTCTTCATCTTCATCTTATTCTTCTTCTTATTATTCTTCTTCTTCTTCTT  146

seq1  CTTCTTCTTCTTCTTCTTCATCTTTTTCTTCCTCCTCCTCCTCCTGCTCC  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTCTTCTTCTTCATCTTTTTCTTCCTCCTCCTCCTCCTGCTCC  196

seq1  ATCTCCTCCTTCTGTTCCACTTCCTTATCCTTCTCTTTATCTTCTTCATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCCTTCTGTTCCACTTCCTTATCCTTCTCTTTATCTTCTTCATT  246

seq1  TTTATTTTTTAATATATTCAGCTCACAAGTATGGGTCAACCACAAGCATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTAATATATTCAGCTCACAAGTATGGGTCAACCACAAGCATG  296

seq1  ACTCAAGAGCGAGCTATACTCTGCTGCCATGCCCAGTCAAGGCTCAGAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGAGCGAGCTATACTCTGCTGCCATGCCCAGTCAAGGCTCAGAAC  346

seq1  AAACTCTTCCAAATGCTGTAGCCTGTAAGAGGCAAAGCCAGTTCTCCCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTCCAAATGCTGTAGCCTGTAAGAGGCAAAGCCAGTTCTCCCAC  396

seq1  TCTTGTAATTCTGAGGCTACTTTTCCCAACTGCAGTATTTGCCAACCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAATTCTGAGGCTACTTTTCCCAACTGCAGTATTTGCCAACCATA  446

seq1  ATTGGAAATGGAGACATCACTTCCTTCCCAGGGCCACCCATAGAAGACTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAATGGAGACATCACTTCCTTCCCAGGGCCACCCATAGAAGACTA  496

seq1  GACCATGTAAACCCTCTCACATTCATGCTCTCCAAATTGACCCCCCCCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGTAAACCCTCTCACATTCATGCTCTCCAAATTGACCCCCCCCCC  546

seq1  CCAGAAAAAGGTCCTCTTCACTGTTATG  577
      ||||||||||||||||||||||||||||
seq2  CCAGAAAAAGGTCCTCTTCACTGTTATG  574