BAC Information

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BAC

Clone NameB6Ng01-182C13
Chromosome7 (Build37)
Map Location 138,507,392 - 138,508,571
singlet/doubletsinglet
Overlap genenone
Upstream geneAte1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik
Downstream genePstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679, Gpr26, Cpxm2, 4631426J05Rik, LOC100043682
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182C13.bB6Ng01-182C13.g
ACCGA008130GA008131
length1,1661,171
definitionB6Ng01-182C13.b B6Ng01-182C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatatttatatattt
gtgactattgagaaggtgtgtttccctaatttctttctcagcctgtttat
tctttgtgtagagaaggccattgactggtttgagttattatatcagctac
ttcacgagctgttatccagttagagttcctcggggaatttaagggtctca
tatacgtactatcattcgccaaggatacttgactccttccaattgtatcc
tggatcccttttgtgc
gaattctatagacagtcaccagagtgtatgtataatgtgttcatcaagtt
tgaaagagaaatcagagattcagtataaacaaaatctagaaacagtaacc
tttaattctaaaaggctcaatttatatttttaaaagaaattccccacatt
ctaagtggtcatcattcttgttctgtttagtatggggagccccctcagag
tgcacaaccaattgaaagtctttattctaggtatagcccctgagtgtcca
gaacatgggattttaagagaccttaaagcgaaggcatctcccttggctgc
tgcatcagagcactacggagtaagcagttttaacagaagctaagatgagc
tgttagccagccaccaaggagggttctgaacaaatgagcaacttagaaga
acagttagctggaggaggttccgcacaaacaagcagtttcaacaaaggct
aagatacgttatcttggccattctgacctttggttcctagagtggagttg
agtagttttccataggattctccagctcaaggagatcagattcagggtaa
acctgaaaccggccggtggcaagaaggcctttgcagtgtcttgccctgtt
actctgtatttccggctcctctggttataaactaggttaatacgtgtaga
cagtcctaatggaagtacactctagaaacactaacttgcaggtttgcgtg
caagattaataataccttgcgggtttttacttccttaaataaagctgatg
aatcagaagactaaaggcacctatcataaaagactcctgccaataaatca
ccgtttctccatcctctcaaaagctcttatcttcatctctgcttgtcatg
tgttgaggcgttagcttcatctgaactgttctgggagtttctcagcccaa
catcttgcgcctgttctcattaccgccatatcctctgctctgccctctat
ccctttgtaatgattgttgctgatggctggaccacatgacctttacattc
ttagcattcaagcctgtgactcattctcctccccccttagaatactatcc
tttttcattagttttggaagaaaagaaacactctcattcacagcagctta
gccgtactatagaatggagcatttcctcggctacatcgactgttagaagc
ctaaattccttgcagttccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_138507392_138508571
seq2: B6Ng01-182C13.g_65_1235

seq1  GAATTCTATAGACAGTCACCAGAGTGTATGTATAATGTGTTCATCAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGACAGTCACCAGAGTGTATGTATAATGTGTTCATCAAGTT  50

seq1  TGAAAGAGAAATCAGAGATTCAGTATAAACAAAATCTAGAAACAGTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGAAATCAGAGATTCAGTATAAACAAAATCTAGAAACAGTAACC  100

seq1  TTTAATTCTAAAAGGCTCAATTTATATTTTTAAAAGAAATTCCCCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCTAAAAGGCTCAATTTATATTTTTAAAAGAAATTCCCCACATT  150

seq1  CTAAGTGGTCATCATTCTTGTTCTGTTTAGTATGGGGAGCCCCCTCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGTCATCATTCTTGTTCTGTTTAGTATGGGGAGCCCCCTCAGAG  200

seq1  TGCACAACCAATTGAAAGTCTTTATTCTAGGTATAGCCCCTGAGTGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACCAATTGAAAGTCTTTATTCTAGGTATAGCCCCTGAGTGTCCA  250

seq1  GAACATGGGATTTTAAGAGACCTTAAAGCGAAGGCATCTCCCTTGGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGGATTTTAAGAGACCTTAAAGCGAAGGCATCTCCCTTGGCTGC  300

seq1  TGCATCAGAGCACTACGGAGTAAGCAGTTTTAACAGAAGCTAAGATGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAGAGCACTACGGAGTAAGCAGTTTTAACAGAAGCTAAGATGAGC  350

seq1  TGTTAGCCAGCCACCAAGGAGGGTTCTGAACAAATGAGCAACTTAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCCAGCCACCAAGGAGGGTTCTGAACAAATGAGCAACTTAGAAGA  400

seq1  ACAGTTAGCTGGAGGAGGTTCCGCACAAACAAGCAGTTTCAACAAAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAGCTGGAGGAGGTTCCGCACAAACAAGCAGTTTCAACAAAGGCT  450

seq1  AAGATACGTTATCTTGGCCATTCTGACCTTTGGTTCCTAGAGTGGAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACGTTATCTTGGCCATTCTGACCTTTGGTTCCTAGAGTGGAGTTG  500

seq1  AGTAGTTTTCCATAGGATTCTCCAGCTCAAGGAGATCAGATTCAGGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTTTCCATAGGATTCTCCAGCTCAAGGAGATCAGATTCAGGGTAA  550

seq1  ACCTGAAACCGGCCGGTGGCAAGAAGGCCTTTGCAGTGTCTTGCCCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAACCGGCCGGTGGCAAGAAGGCCTTTGCAGTGTCTTGCCCTGTT  600

seq1  ACTCTGTATTTCCGGCTCCTCTGGTTATAAACTAGGTTAATACGTGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTATTTCCGGCTCCTCTGGTTATAAACTAGGTTAATACGTGTAGA  650

seq1  CAGTCCTAATGGAAGTACACTCTAGAAACACTAACTTGCAGGTTTGCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTAATGGAAGTACACTCTAGAAACACTAACTTGCAGGTTTGCGTG  700

seq1  CAAGATTAATAATACCTTGCGGGTTTTTACTTCCTTAAATAAGGCTGATG  750
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAAGATTAATAATACCTTGCGGGTTTTTACTTCCTTAAATAAAGCTGATG  750

seq1  AATCAGAAGACTAAAGGCACCTATCATAAAAGACTCCTGCCAATAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAAGACTAAAGGCACCTATCATAAAAGACTCCTGCCAATAAATCA  800

seq1  CCGTTTCTCCATCCTCTCAAAAGCTCTTATCTTCATCTCTGCTTGTCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTCTCCATCCTCTCAAAAGCTCTTATCTTCATCTCTGCTTGTCATG  850

seq1  TGTTGAGGCGTTAGCTTCATCTGAACTGTTCTGGGAGTTTCTCAG-CCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTTGAGGCGTTAGCTTCATCTGAACTGTTCTGGGAGTTTCTCAGCCCAA  900

seq1  CATCTTGCGCCTGTTCTCATTACCGCCATATCCTCTGCTCTGCCCTCTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCGCCTGTTCTCATTACCGCCATATCCTCTGCTCTGCCCTCTAT  950

seq1  CCC-TTGTAATGATTGTTGCTGATGGCTGGACCAACATGACCTTTACA-T  997
      ||| ||||||||||||||||||||||||||||| |||||||||||||| |
seq2  CCCTTTGTAATGATTGTTGCTGATGGCTGGACC-ACATGACCTTTACATT  999

seq1  CTTAGCATTCAAAGCCTGGTGAACTCAATCTCCTCCCCC--TAGAATACT  1045
      |||||||||| |||||| ||| ||||| |||||||||||  |||||||||
seq2  CTTAGCATTC-AAGCCT-GTG-ACTCATTCTCCTCCCCCCTTAGAATACT  1046

seq1  ATCCCTTTTCAATAGTTTTGGAGGAAAAGAACAACCTCTCATTCACAGCC  1095
      |||| |||||| |||||||||| |||||||| |  |||||||||||||| 
seq2  ATCCTTTTTCATTAGTTTTGGAAGAAAAGAA-ACACTCTCATTCACAGC-  1094

seq1  AAGCTTAAACCCGTACTATAGAATGGAAGCGATTCCTCGGCTACATCGCA  1145
       |||||  | |||||||||||||||| |||  |||||||||||||||| |
seq2  -AGCTT--AGCCGTACTATAGAATGG-AGCATTTCCTCGGCTACATCG-A  1139

seq1  CTGTTTGAAGCCCTATAATTCCCTTGCAGTTCCAG  1180
      ||||| ||||||   ||| | ||||||||||||||
seq2  CTGTTAGAAGCC---TAAATTCCTTGCAGTTCCAG  1171