BAC Information

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BAC

Clone NameB6Ng01-182J20
Chromosome7 (Build37)
Map Location 102,381,478 - 102,502,793
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666816, LOC100040132
Downstream geneLOC666823, Frda-ps, EG666836, Odz4, LOC670727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182J20.bB6Ng01-182J20.g
ACCGA008457GA008458
length1,175732
definitionB6Ng01-182J20.b B6Ng01-182J20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,381,478 - 102,382,660)(102,502,064 - 102,502,793)
sequence
gaattcttcttctcttaagttctgtatgttagttgttttgacacaacagt
ttaataagtaactaatacaggatgctcttccttgtttgttcattggatca
agcacattttaaaacatattaaacataaacaagtccctcgttatcaatgt
gcaactcttccatgtttccctttatgacccacttcttcaattcgttatct
caaaatgtactcttcacttatttcctagacaccatgtgctcatagttctc
aagggctctggcttccagatggatcctattactgagaagcagcagcttga
ctttaaagagagagtagagaatacatttctggtagcaattctgctgtccg
ctgcctatggggttgctgaggactcctgattccataattgcatcatttat
tacttgtcctctcatcacaccctttcatctcagagttctagtaactgccc
gttacacttgtctttaaaaggatattcatgatgcaacactgttttggact
ctgagcacaatcctgtgcttttgttacatacttcccttagctttatgtcc
ataaatcttgaattaagtccttctcaaatattcttgatagaaatctaatg
ctttctaattgaccttagttgacacattttccttttgcggcagcatccca
cgcctttactgattatcatctgcttattcttcaacgtagctctgcatgcc
acctatttttttttttcaactgtattactgtggaaagcaacactgatcaa
tgcaatacccatttactcatcctacagtttcattgctctacattcttcct
cattaataacgtgattttactgatacaataaataatcaaattatatttcc
atattaaaagctcagcagtccatgagtcttcacattttgttgactattct
aggggaagtagaggaaacgttgttattgcaaccttaaaaaataattaaaa
acttttaatagttttcttattcttccccccttacattctctatgatatct
tccatcttggactagtctgcttccaatgtgtttgcccaagcgattttagt
attctctgttattctcaagcatgctacaaggtgctcctcagctgaaatca
ttttatgttcagtatataatacctaagtttaaagctctggggtgttggta
tccaagcatttttggtgggataatc

gaattcatttattgagcaatttattcactaggtaatttatttttgtaatt
caccttctggatcaccctttgtactgtcacccaacacaaaacagggtgaa
ggtagagtgggtacactatgtgagaggagcacctgataagcaagagatgg
aagcgtgaggagcgtggagtccaagcagcaagggagagggaggactagaa
gaaaatggcaagccatgacgttgaggagctctgaaagcagtagagatcca
tcccaaagtgcaagtaaaagccaggagtttttttaatgactggtatagga
ctatgatggggtgttattatgtaatgtggtggctagaagtgcagccaaat
gtatctgaaaagcacttcaaatatggcaagtccaaactgagatgggccat
aagtgtaaggtgcacagagatggtaaagatctgagtacaaagtaattcaa
agcccattcttacaaatctatacattgaaagggtaacataccatatatta
ggccttaaaatatgtcttattactaatagaagctgcttcttggttttttt
ttttttactatgtcactaatctgttagaaaattcaaacttacttatgtgc
ttcaagttatatctctatattttaagagtttagtctagatagagccaaaa
attgttaacatgagaaaagaaataagactttcacattagtgagtttacaa
cagtgttgtttttatatacatgtagatgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102381478_102382660
seq2: B6Ng01-182J20.b_49_1223

seq1  GAATTCTTCTTCTCTTAAGTTCTGTATGTTAGTTGTTTTGACACAACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTCTCTTAAGTTCTGTATGTTAGTTGTTTTGACACAACAGT  50

seq1  TTAATAAGTAACTAATACAGGATGCTCTTCCTTGTTTGTTCATTGGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGTAACTAATACAGGATGCTCTTCCTTGTTTGTTCATTGGATCA  100

seq1  AGCACATTTTAAAACATATTAAACATAAACAAGTCCCTCGTTATCAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTTTAAAACATATTAAACATAAACAAGTCCCTCGTTATCAATGT  150

seq1  GCAACTCTTCCATGTTTCCCTTTATGACCCACTTCTTCAATTCGTTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCTTCCATGTTTCCCTTTATGACCCACTTCTTCAATTCGTTATCT  200

seq1  CAAAATGTACTCTTCACTTATTTCCTAGACACCATGTGCTCATAGTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTACTCTTCACTTATTTCCTAGACACCATGTGCTCATAGTTCTC  250

seq1  AAGGGCTCTGGCTTCCAGATGGATCCTATTACTGAGAAGCAGCAGCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTCTGGCTTCCAGATGGATCCTATTACTGAGAAGCAGCAGCTTGA  300

seq1  CTTTAAAGAGAGAGTAGAGAATACATTTCTGGTAGCAATTCTGCTGTCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAGAGAGAGTAGAGAATACATTTCTGGTAGCAATTCTGCTGTCCG  350

seq1  CTGCCTATGGGGTTGCTGAGGACTCCTGATTCCATAATTGCATCATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTATGGGGTTGCTGAGGACTCCTGATTCCATAATTGCATCATTTAT  400

seq1  TACTTGTCCTCTCATCACACCCTTTCATCTCAGAGTTCTAGTAACTGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTCCTCTCATCACACCCTTTCATCTCAGAGTTCTAGTAACTGCCC  450

seq1  GTTACACTTGTCTTTAAAAGGATATTCATGATGCAACACTGTTTTGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACTTGTCTTTAAAAGGATATTCATGATGCAACACTGTTTTGGACT  500

seq1  CTGAGCACAATCCTGTGCTTTTGTTACATACTTCCCTTAGCTTTATGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCACAATCCTGTGCTTTTGTTACATACTTCCCTTAGCTTTATGTCC  550

seq1  ATAAATCTTGAATTAAGTCCTTCTCAAATATTCTTGATAGAAATCTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTGAATTAAGTCCTTCTCAAATATTCTTGATAGAAATCTAATG  600

seq1  CTTTCTAATTGACCTTAGTTGACACATTTTCCTTTTGCGGCAGCATCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAATTGACCTTAGTTGACACATTTTCCTTTTGCGGCAGCATCCCA  650

seq1  CGCCTTTACTGATTATCATCTGCTTATTCTTCAACGTAGCTCTGCATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTACTGATTATCATCTGCTTATTCTTCAACGTAGCTCTGCATGCC  700

seq1  ACCTA-TTTTTTTTTTCAACTGTATTACTGTGGAAAGCAACACTGATCAA  749
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTTTTTTTTTTCAACTGTATTACTGTGGAAAGCAACACTGATCAA  750

seq1  TGCAATACCCATTTACTCATCCTACAGTTTCATTGCTCTACATTCTTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATACCCATTTACTCATCCTACAGTTTCATTGCTCTACATTCTTCCT  800

seq1  CATTAATAACGTGATTTTACTGATACAATAAATAATCAAATTATATTTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATAACGTGATTTTACTGATACAATAAATAATCAAATTATATTTCC  850

seq1  ATATTAAAAGCTCAGCAGTCCATGAGTCTTCACATTTTGTTGACTATTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAAGCTCAGCAGTCCATGAGTCTTCACATTTTGTTGACTATTCT  900

seq1  AGGGGAAGTAGAGGGAAACGTTGTTATTGCAACCTTAAAAAATAATTAAA  949
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGTAGA-GGAAACGTTGTTATTGCAACCTTAAAAAATAATTAAA  949

seq1  AACTTTTAATAAGTTTTCTTATTTCTTCCCCCCTTACATTCTCTATGATA  999
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  AACTTTTAAT-AGTTTTCTTA-TTCTTCCCCCCTTACATTCTCTATGATA  997

seq1  TCTTCCATCTTGGACTAGTCTGCCTTTCCCATGTGTTTGCCCAAGCGATT  1049
      |||||||||||||||||||||||  |||| ||||||||||||||||||||
seq2  TCTTCCATCTTGGACTAGTCTGC--TTCCAATGTGTTTGCCCAAGCGATT  1045

seq1  TTAGTATTCTCTGTTTAATTCTCAAAGCATGCTACAA-GTGCT-CTCAAG  1097
      |||||||||||||||  |||||| ||||||||||||| ||||| ||||  
seq2  TTAGTATTCTCTGTT--ATTCTC-AAGCATGCTACAAGGTGCTCCTCA--  1090

seq1  GCTGAAATCA-TTTATG-TCAGTATTATAATA-CTTAGTTTAAAAAGCTC  1144
      |||||||||| |||||| |||||| ||||||| || |||||  |||||||
seq2  GCTGAAATCATTTTATGTTCAGTA-TATAATACCTAAGTTT--AAAGCTC  1137

seq1  TTGGTGTGTTTGTAAATCAGAGCATTTTTG--TGGATAATC  1183
       ||| ||||| ||  |||  ||||||||||   ||||||||
seq2  -TGGGGTGTTGGT--ATCCAAGCATTTTTGGTGGGATAATC  1175


seq1: chr7_102502064_102502793
seq2: B6Ng01-182J20.g_65_796 (reverse)

seq1  TATACATCTACATGTATATAAAAAC-ACACTGTTGTAAACTCACTAATGT  49
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATACATCTACATGTATATAAAAACAACACTGTTGTAAACTCACTAATGT  50

seq1  GAAAGTCTTATTTCTTTTCTCATGTT-ACAATTTTTGGCTCTATCTAGAC  98
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAAGTCTTATTTCTTTTCTCATGTTAACAATTTTTGGCTCTATCTAGAC  100

seq1  TAAACTCTTAAAATATAGAGATATAACTTGAAGCACATAAGTAAGTTTGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTTAAAATATAGAGATATAACTTGAAGCACATAAGTAAGTTTGA  150

seq1  ATTTTCTAACAGATTAGTGACATAGTAAAAAAAAAAAAACCAAGAAGCAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAACAGATTAGTGACATAGTAAAAAAAAAAAAACCAAGAAGCAG  200

seq1  CTTCTATTAGTAATAAGACATATTTTAAGGCCTAATATATGGTATGTTAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTAGTAATAAGACATATTTTAAGGCCTAATATATGGTATGTTAC  250

seq1  CCTTTCAATGTATAGATTTGTAAGAATGGGCTTTGAATTACTTTGTACTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAATGTATAGATTTGTAAGAATGGGCTTTGAATTACTTTGTACTC  300

seq1  AGATCTTTACCATCTCTGTGCACCTTACACTTATGGCCCATCTCAGTTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTACCATCTCTGTGCACCTTACACTTATGGCCCATCTCAGTTTG  350

seq1  GACTTGCCATATTTGAAGTGCTTTTCAGATACATTTGGCTGCACTTCTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCCATATTTGAAGTGCTTTTCAGATACATTTGGCTGCACTTCTAG  400

seq1  CCACCACATTACATAATAACACCCCATCATAGTCCTATACCAGTCATTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACATTACATAATAACACCCCATCATAGTCCTATACCAGTCATTAA  450

seq1  AAAAACTCCTGGCTTTTACTTGCACTTTGGGATGGATCTCTACTGCTTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCCTGGCTTTTACTTGCACTTTGGGATGGATCTCTACTGCTTTC  500

seq1  AGAGCTCCTCAACGTCATGGCTTGCCATTTTCTTCTAGTCCTCCCTCTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCTCAACGTCATGGCTTGCCATTTTCTTCTAGTCCTCCCTCTCC  550

seq1  CTTGCTGCTTGGACTCCACGCTCCTCACGCTTCCATCTCTTGCTTATCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGCTTGGACTCCACGCTCCTCACGCTTCCATCTCTTGCTTATCAG  600

seq1  GTGCTCCTCTCACATAGTGTACCCACTCTACCTTCACCCTGTTTTGTGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCTCTCACATAGTGTACCCACTCTACCTTCACCCTGTTTTGTGTT  650

seq1  GGGTGACAGTACAAAGGGTGATCCAGAAGGTGAATTACAAAAATAAATTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACAGTACAAAGGGTGATCCAGAAGGTGAATTACAAAAATAAATTA  700

seq1  CCTAGTGAATAAATTGCTCAATAAATGAATTC  730
      ||||||||||||||||||||||||||||||||
seq2  CCTAGTGAATAAATTGCTCAATAAATGAATTC  732


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