BAC Information

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BAC

Clone NameB6Ng01-183F11
Chromosome7 (Build37)
Map Location 83,867,508 - 83,942,355
singlet/doubletdoublet
Overlap geneEG244071
Upstream geneAkap13, Klhl25, LOC100042210, LOC434200
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183F11.bB6Ng01-183F11.g
ACCGA008990GA008991
length1,0251,135
definitionB6Ng01-183F11.b B6Ng01-183F11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,941,334 - 83,942,355)(83,867,508 - 83,868,661)
sequence
gaattcaaggccagactaggtaacttagcatgacaatctcaaaatgaaaa
attaatgacagcacaaaggcttaggacatatttcagtggtagagtgcttg
tcttaaatgggggaagggaggctgtaggttcaatccctagcaatgcataa
acatgtgtacacacacacacacacacacacacacacacacacacacacac
agtggcaggggaaaagaagagatggcaaaaattctttctaatactattat
tctactaagtggatagagtattaaaaagtctcctaatgacttattgcaat
atctatatatatagatatatagatagatcagtatatttctgaatcttctt
caaagaagtttcttcttgcagtagagaacaattaacacagaatgtctcaa
ctggtagaaatgctgaggataagagagtatggagtgtcatttcaaaatgg
tatatgcatatcacaacactcccaccatggctcaggaaacatttcagtga
atgagggaaagatagactgtaagagtcagagccgaataactttaaggaaa
aggtgttttccagacagaacagagcaatttcacatatgaattcataggaa
ttgtgataacatgtaaaagctcaagacacacaaaatctcagcatccatta
aaggggtagacagacacaaaatcctacctatcactgtgtgaggtatttga
tggtttccaggagaggcagaattttgttgttgttgttgtttttgtttttt
gatttttttttcttgctttggcatttaatacactaggacaggtttcactc
acaaaagtatttcagcaatgcaaattgggttcaatcagagaagaagtagg
aggaggaaaaggataaggaggatgagtaagaagaggaaaaggaggaagaa
aaaaagaggagaaaaacttgaatttgggtgcaagagggtggaaagagtag
ttcttagaagagctgcaagggtggacaattgtcaaaaatacattgtgtaa
aaattacatcatggagtgaggatgt

gaattccctgcaaaaatgaaggaatgctcaaaagccctttctgtagctca
tcaggctcacagttgagattaaccatctgaatgaccaattgcacagtgga
ctcttatcttctgtatttcacttttattgcatgatgataatgtttatgtt
atatattagtttattaatacatccaacatttcaagctcacttctgtgtca
agtaaggcaaaagatttgacaagggagaggtagacagataatagtttctg
cctctgagaacaagttatggagtgtttgatagcaatgttattaaaatatt
agcccatctgcacattgacagtcatctataggatatcttgttttaggttg
tcagttgccagtgtctcattttttcttccctataaaatgataaagtcaga
gtttgtaagaaatgaataaaattgagtttgttggtactctggagttcttc
aaggattattcctggctattaagcaatggatgtaaggggaacatgagtaa
tgttgagcttgttctcgcatcttccatacttacagactcattttgtagtt
cctgctcaatatttgtctccttccaccatcggtattttaaatctaaggca
ctgtgatctataactgatggccttgattgtggtgtttagcctaaaatatg
ttttgcctctgtgcaaatagatttttgagaatcgaaaggatgtgttcact
ttgtcacaaggagttggagaccttggaaagaccctttatgcaagacatgt
ttatagtcctcactgttaccaggagtcacagccttgagtgtgaattttca
tatcaaacaaagcaactcttaccggagaaattctgtcctttaatatcagt
gtcaaaatgataaacacatttcacacacactcaaaatatttattcaattt
tattaatcaatcatattgggacttctaattataatattaaaaacaggtca
gtgaatgtattcttcaaaacacaattatgaaaggagacaaattaataaag
atgtattttaagcctctttaaatgaccggatacatgtgagaaatagccag
tctgaaactcctagagttttgtgcagaacagatcaatctgactacctatt
ggattctaaacattttttttcagaacgtctttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_83941334_83942355
seq2: B6Ng01-183F11.b_44_1068 (reverse)

seq1  ACATCCTCACTCCATGATGTAA-TTTTACACAATGTA-TTTTGACAATTG  48
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  ACATCCTCACTCCATGATGTAATTTTTACACAATGTATTTTTGACAATTG  50

seq1  TCCACCCTTGCAGCTCTTCTAAGAACTACTCTTTCCACCCTCTTGCACCC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCTTGCAGCTCTTCTAAGAACTACTCTTTCCACCCTCTTGCACCC  100

seq1  AAATTCAAGTTTTTCTCCTC-TTTTTTCTTCCTCCTTTTCCTCTTCTTAC  147
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATTCAAGTTTTTCTCCTCTTTTTTTCTTCCTCCTTTTCCTCTTCTTAC  150

seq1  TCATCCTCCTTATCCTTTTCCTCCTCCTACTTCTTCTCTGATTGAACCCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTCCTTATCCTTTTCCTCCTCCTACTTCTTCTCTGATTGAACCCA  200

seq1  ATTTGCATTGCTGAAATACTTTTGTGAGTGAAACCTGTCCTAGTGTATTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATTGCTGAAATACTTTTGTGAGTGAAACCTGTCCTAGTGTATTA  250

seq1  AATGCCAAAGCAAGAAAAAAAAATCAAAAAACAAAAACAACAACAACAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAAAGCAAGAAAAAAAAATCAAAAAACAAAAACAACAACAACAAC  300

seq1  AAAATTCTGCCTCTCCTGGAAACCATCAAATACCTCACACAGTGATAGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTGCCTCTCCTGGAAACCATCAAATACCTCACACAGTGATAGGT  350

seq1  AGGATTTTGTGTCTGTCTACCCCTTTAATGGATGCTGAGATTTTGTGTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTGTGTCTGTCTACCCCTTTAATGGATGCTGAGATTTTGTGTGT  400

seq1  CTTGAGCTTTTACATGTTATCACAATTCCTATGAATTCATATGTGAAATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCTTTTACATGTTATCACAATTCCTATGAATTCATATGTGAAATT  450

seq1  GCTCTGTTCTGTCTGGAAAACACCTTTTCCTTAAAGTTATTCGGCTCTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTTCTGTCTGGAAAACACCTTTTCCTTAAAGTTATTCGGCTCTGA  500

seq1  CTCTTACAGTCTATCTTTCCCTCATTCACTGAAATGTTTCCTGAGCCATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAGTCTATCTTTCCCTCATTCACTGAAATGTTTCCTGAGCCATG  550

seq1  GTGGGAGTGTTGTGATATGCATATACCATTTTGAAATGACACTCCATACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGTGTTGTGATATGCATATACCATTTTGAAATGACACTCCATACT  600

seq1  CTCTTATCCTCAGCATTTCTACCAGTTGAGACATTCTGTGTTAATTGTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCCTCAGCATTTCTACCAGTTGAGACATTCTGTGTTAATTGTTC  650

seq1  TCTACTGCAAGAAGAAACTTCTTTGAAGAAGATTCAGAAATATACTGATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGCAAGAAGAAACTTCTTTGAAGAAGATTCAGAAATATACTGATC  700

seq1  TATCTATATATCTATATATATAGATATTGCAATAAGTCATTAGGAGACTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATATATCTATATATATAGATATTGCAATAAGTCATTAGGAGACTT  750

seq1  TTTAATACTCTATCCACTTAGTAGAATAATAGTATTAGAAAGAATTTTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACTCTATCCACTTAGTAGAATAATAGTATTAGAAAGAATTTTTG  800

seq1  CCATCTCTTCTTTTCCCCTGCCACTGTGTGTGTGTGTGTGTGTGTGTGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTTCTTTTCCCCTGCCACTGTGTGTGTGTGTGTGTGTGTGTGTG  850

seq1  TGTGTGTGTGTGTGTGTACACATGTTTATGCATTGCTAGGGATTGAACCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTACACATGTTTATGCATTGCTAGGGATTGAACCT  900

seq1  ACAGCCTCCCTTCCCCCATTTAAGACAAGCACTCTACCACTGAAATATGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTCCCTTCCCCCATTTAAGACAAGCACTCTACCACTGAAATATGT  950

seq1  CCTAAGCCTTTGTGCTGTCATTAATTTTTCATTTTGAGATTGTCATGCTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCCTTTGTGCTGTCATTAATTTTTCATTTTGAGATTGTCATGCTA  1000

seq1  AGTTACCTAGTCTGGCCTTGAATTC  1022
      |||||||||||||||||||||||||
seq2  AGTTACCTAGTCTGGCCTTGAATTC  1025


seq1: chr7_83867508_83868661
seq2: B6Ng01-183F11.g_67_1201

seq1  GAATTCCCTGCAAAAATGAAGGAATGCTCAAAAGCCCTTTCTGTAGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCAAAAATGAAGGAATGCTCAAAAGCCCTTTCTGTAGCTCA  50

seq1  TCAGGCTCACAGTTGAGATTAACCATCTGAATGACCAATTGCACAGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTCACAGTTGAGATTAACCATCTGAATGACCAATTGCACAGTGGA  100

seq1  CTCTTATCTTCTGTATTTCACTTTTATTGCATGATGATAATGTTTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCTTCTGTATTTCACTTTTATTGCATGATGATAATGTTTATGTT  150

seq1  ATATATTAGTTTATTAATACATCCAACATTTCAAGCTCACTTCTGTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAGTTTATTAATACATCCAACATTTCAAGCTCACTTCTGTGTCA  200

seq1  AGTAAGGCAAAAGATTTGACAAGGGAGAGGTAGACAGATAATAGTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGCAAAAGATTTGACAAGGGAGAGGTAGACAGATAATAGTTTCTG  250

seq1  CCTCTGAGAACAAGTTATGGAGTGTTTGATAGCAATGTTATTAAAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGAACAAGTTATGGAGTGTTTGATAGCAATGTTATTAAAATATT  300

seq1  AGCCCATCTGCACATTGACAGTCATCTATAGGATATCTTGTTTTAGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATCTGCACATTGACAGTCATCTATAGGATATCTTGTTTTAGGTTG  350

seq1  TCAGTTGCCAGTGTCTCATTTTTTCTTCCCTATAAAATGATAAAGTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCCAGTGTCTCATTTTTTCTTCCCTATAAAATGATAAAGTCAGA  400

seq1  GTTTGTAAGAAATGAATAAAATTGAGTTTGTTGGTACTCTGGAGTTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAAGAAATGAATAAAATTGAGTTTGTTGGTACTCTGGAGTTCTTC  450

seq1  AAGGATTATTCCTGGCTATTAAGCAATGGATGTAAGGGGAACATGAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTATTCCTGGCTATTAAGCAATGGATGTAAGGGGAACATGAGTAA  500

seq1  TGTTGAGCTTGTTCTCGCATCTTCCATACTTACAGACTCATTTTGTAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCTTGTTCTCGCATCTTCCATACTTACAGACTCATTTTGTAGTT  550

seq1  CCTGCTCAATATTTGTCTCCTTCCACCATCGGTATTTTAAATCTAAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCAATATTTGTCTCCTTCCACCATCGGTATTTTAAATCTAAGGCA  600

seq1  CTGTGATCTATAACTGATGGCCTTGATTGTGGTGTTTAGCCTAAAATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATCTATAACTGATGGCCTTGATTGTGGTGTTTAGCCTAAAATATG  650

seq1  TTTTGCCTCTGTGCAAATAGATTTTTGAGAATCGAAAGGATGTGTTCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTCTGTGCAAATAGATTTTTGAGAATCGAAAGGATGTGTTCACT  700

seq1  TTGTCACAAGGAGTTGGAGACCTTGGAAAGACCCTTTATGCAAGACATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAAGGAGTTGGAGACCTTGGAAAGACCCTTTATGCAAGACATGT  750

seq1  TTATAGTCCTCACTGTTACCAGGAGTCACAGCCTTGAGTGTGAATTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCCTCACTGTTACCAGGAGTCACAGCCTTGAGTGTGAATTTTCA  800

seq1  TATCAAACAAAGCAACTCTTACCGGAGAAATTCTGTCCTTTAATATCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAACAAAGCAACTCTTACCGGAGAAATTCTGTCCTTTAATATCAGT  850

seq1  GTCAAAATGATAAACACATTTCACACACACTCAAAATATTTATTCAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATGATAAACACATTTCACACACACTCAAAATATTTATTCAATTT  900

seq1  TATTAATCAATCATATTGGGACTTCTAATTATAATATTAAAAACAGGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATCAATCATATTGGGACTTCTAATTATAATATTAAAAACAGGTCA  950

seq1  GTGAATGTATTCTTCAAAACACAATTATGAAAGGAGACAAAATTAATAAA  1000
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  GTGAATGTATTCTTCAAAACACAATTATGAAAGGAGAC-AAATTAAT-AA  998

seq1  AGATGTAATTTTAAGCCTCTTTAAAATGACCGGATACATGTGAAGAAATA  1050
      |||||| ||||||||||||||| ||||||||||||||||||| |||||||
seq2  AGATGT-ATTTTAAGCCTCTTT-AAATGACCGGATACATGTG-AGAAATA  1045

seq1  GCCAGTCTTGAAAACTCCTAGAGTTTTGTGCAGGAACAGATCAAATCTGA  1100
      ||||||||   ||||||||||||||||||||| ||||||||| |||||||
seq2  GCCAGTCT--GAAACTCCTAGAGTTTTGTGCA-GAACAGATC-AATCTGA  1091

seq1  CTTACTTAATGGGATTTCCTTAAACATTTTTTTTTTCAAGACAGGGTCTT  1150
      ||  ||  || |||||    ||||||  ||||||||||  ||   |||||
seq2  CTACCT--ATTGGATT---CTAAACA--TTTTTTTTCAGAAC---GTCTT  1131

seq1  TCTG  1154
      ||||
seq2  TCTG  1135


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