BAC Information

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BAC

Clone NameB6Ng01-184B24
Chromosome7 (Build37)
Map Location 20,514,076 - 20,686,148
singlet/doubletdoublet
Overlap gene2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067
Upstream geneNova2, Nanos2, P42pop, Irf2bp1, Foxa3, Sympk, Rshl1, Dmwd, Dmpk, Six5, EG243866, Fbxo46, Qpctl, Snrpd2, Gipr, Eml2, Gpr4, Opa3, Vasp, C79127, Rtn2, Fosb, D830036C21Rik, Ercc1, Cd3eap, Ppp1r13l, Ercc2, Klc3, Ckm, Mark4, 4933417E01Rik, Bloc1s3, Trappc6a, Nkpd1, BC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr
Downstream geneLOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184B24.bB6Ng01-184B24.g
ACCGA009577GA009578
length1,140737
definitionB6Ng01-184B24.b B6Ng01-184B24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,685,011 - 20,686,148)(20,514,076 - 20,514,640)
sequence
gaattcaatacaattaggagggaggaaaggcttcaattgggatgtaacta
aatcaataacaaataaaagaatatataaatgcaatgtaaaaataattaat
tgaatttcttatgttatagtaacatattaaaaatagtatgtatgggaaca
atataatattgcactcaataataaagttgtataactgaattcagttgtag
aaaattaagttgttggcttttgagaaaattttatactacttatcctcaaa
attaaaaaaaaacaccaaatacttctgataaagccacctgtgttgtaatg
acacacatgaacataggctaacatatgtgtcctccatatgaaaaaaaaaa
ccacttgctaacaagtttcatttattcataattttactgatcataatttt
tgttctaaaatgtgaggtgccatagccttacctgcatcatctgcagattc
cctccaaaattattaacacaatccctttgcagtaatttaatataatataa
tataatataatataatataatataataccaataccctttgcaacctgatg
cttagtctgcactttacttgtttatatgttttctataggaacacaagggc
ctccatccacaaggtataattcattatctcacatacatgttacactgaat
gctgttttctcctgagtactattctaggacacagacatttctttgacatg
aaagcaaaatgttaacctatttaagttaaccttcagacttcagaaagaaa
taatgtttcatgttggcttcagaggacaattttcactgaagagaaaagaa
ttttaagcagaagtctatgatagatgaatcccaccttctgagcctcagtc
aggatgaagatgctcatctgaaaaccaggtgcagagcacagctcctatag
aagcatatttcctagtgcctggattcaggaacttctctgtgtcactcttg
cctgagaaagaatgcaatgaaattcagaatggttttcttattctccatgc
aatgctgtaaggtaacccaacaaagtcctagttccagtctcataaaaaca
ataggcactgggacatgacatcctttcagagagttataattgtgtcatct
ggtgggcgggccgcatatttgttctgcatgtgttctttgg
gaattccagttcagggtgactgtccttttgggaagagtctttaagaccca
gcaactcttagaaaagaaagcacttaattgaggactgtggaggtttgctc
ttgctgactattgtgatgctaagggaggggaggcccaggacctggagtcg
gcaagtagaccctagtgatcgagtttaggaatcccgggcttggagctgag
aagaaccaccagggagaaggtgaaggaggagaagccgccctgggttatat
gagctcaagaaaggatggccctgagccaggcagtggcagcgcatgcattt
aatcccagcacttgggaggcagaggcaggtgggaggcagaggcaggtgga
tttctgggtttgaggccaggctggtctacagagtgagagttccaggacag
ccaggactacacagagaaaccctgtctcgaaaaacaaaacaacaaaacaa
aaacaaaaaccttagccctgagtgctggacagttggagttaagagcagcc
cagatgaatcagagcaagtaataacttattataggaagtagattctaaca
gtagagggtagatatctacccagctcctatttaaggcttattctaaatat
aaaggttatgtgtgtcttttatccggtagctacatggtccaaggtggagt
agaagggtcaggattaaaaatttctacaacagggaacttgcttacagtta
tgtgagcctacagggtgtgtgtgtgggtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_20685011_20686148
seq2: B6Ng01-184B24.b_45_1184 (reverse)

seq1  CCAAAGACACCATGCAG-ACAAATATGCGG-CCGCC--ACAGATGACACA  46
      |||||||   ||||||| |||||||||||| |||||   |||||||||||
seq2  CCAAAGAACACATGCAGAACAAATATGCGGCCCGCCCACCAGATGACACA  50

seq1  ATAATAAACTCTCTG-AAGGATGTCATGTCCCAGTGCCCTATTG-TTTTA  94
      || || ||||||||| |||||||||||||||||||| ||||||| |||||
seq2  ATTAT-AACTCTCTGAAAGGATGTCATGTCCCAGTG-CCTATTGTTTTTA  98

seq1  TGAGACTGGAAACTAGGACTTTGTTGGGTTACCTTTACAGCATTGCATGG  144
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  TGAGACTGG-AACTAGGACTTTGTTGGGTTACC-TTACAGCATTGCATGG  146

seq1  AGAATAAG-AAACCATTCTGAATTTCATTGCATTCTTTCTCAGGCAAAGA  193
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  AGAATAAGAAAACCATTCTGAATTTCATTGCATTCTTTCTCAGGC-AAGA  195

seq1  GTGACACAGAGAAGTTCCTGAATCCAGGCACTAGGAAATATGCTTCTATA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACAGAGAAGTTCCTGAATCCAGGCACTAGGAAATATGCTTCTATA  245

seq1  GGAGCTGTGCTCTGCACCTGGTTTTCAGATGAGCATCTTCATCCTGACTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTGCTCTGCACCTGGTTTTCAGATGAGCATCTTCATCCTGACTG  295

seq1  AGGCTCAGAAGGTGGGATTCATCTATCATAGACTTCTGCTTAAAATTCTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGAAGGTGGGATTCATCTATCATAGACTTCTGCTTAAAATTCTT  345

seq1  TTCTCTTCAGTGAAAATTGTCCTCTGAAGCCAACATGAAACATTATTTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCAGTGAAAATTGTCCTCTGAAGCCAACATGAAACATTATTTCT  395

seq1  TTCTGAAGTCTGAAGGTTAACTTAAATAGGTTAACATTTTGCTTTCATGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCTGAAGGTTAACTTAAATAGGTTAACATTTTGCTTTCATGT  445

seq1  CAAAGAAATGTCTGTGTCCTAGAATAGTACTCAGGAGAAAACAGCATTCA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAATGTCTGTGTCCTAGAATAGTACTCAGGAGAAAACAGCATTCA  495

seq1  GTGTAACATGTATGTGAGATAATGAATTATACCTTGTGGATGGAGGCCCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACATGTATGTGAGATAATGAATTATACCTTGTGGATGGAGGCCCT  545

seq1  TGTGTTCCTATAGAAAACATATAAACAAGTAAAGTGCAGACTAAGCATCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCTATAGAAAACATATAAACAAGTAAAGTGCAGACTAAGCATCA  595

seq1  GGTTGCAAAGGGTATTGGTATTATATTATATTATATTATATTATATTATA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAAAGGGTATTGGTATTATATTATATTATATTATATTATATTATA  645

seq1  TTATATTAAATTACTGCAAAGGGATTGTGTTAATAATTTTGGAGGGAATC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTAAATTACTGCAAAGGGATTGTGTTAATAATTTTGGAGGGAATC  695

seq1  TGCAGATGATGCAGGTAAGGCTATGGCACCTCACATTTTAGAACAAAAAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGATGCAGGTAAGGCTATGGCACCTCACATTTTAGAACAAAAAT  745

seq1  TATGATCAGTAAAATTATGAATAAATGAAACTTGTTAGCAAGTGGTTTTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCAGTAAAATTATGAATAAATGAAACTTGTTAGCAAGTGGTTTTT  795

seq1  TTTTTCATATGGAGGACACATATGTTAGCCTATGTTCATGTGTGTCATTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATATGGAGGACACATATGTTAGCCTATGTTCATGTGTGTCATTA  845

seq1  CAACACAGGTGGCTTTATCAGAAGTATTTGGTGTTTTTTTTTAATTTTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGGTGGCTTTATCAGAAGTATTTGGTGTTTTTTTTTAATTTTGA  895

seq1  GGATAAGTAGTATAAAATTTTCTCAAAAGCCAACAACTTAATTTTCTACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGTAGTATAAAATTTTCTCAAAAGCCAACAACTTAATTTTCTACA  945

seq1  ACTGAATTCAGTTATACAACTTTATTATTGAGTGCAATATTATATTGTTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTCAGTTATACAACTTTATTATTGAGTGCAATATTATATTGTTC  995

seq1  CCATACATACTATTTTTAATATGTTACTATAACATAAGAAATTCAATTAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACATACTATTTTTAATATGTTACTATAACATAAGAAATTCAATTAA  1045

seq1  TTATTTTTACATTGCATTTATATATTCTTTTATTTGTTATTGATTTAGTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTACATTGCATTTATATATTCTTTTATTTGTTATTGATTTAGTT  1095

seq1  ACATCCCAATTGAAGCCTTTCCTCCCTCCTAATTGTATTGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCAATTGAAGCCTTTCCTCCCTCCTAATTGTATTGAATTC  1140

seq1: chr7_20514076_20514640
seq2: B6Ng01-184B24.g_248_802

seq1  CCCGGGCTTGGAGCTGAGAAGAACCACCAGGGAGAAGGTGAAGGAGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGCTTGGAGCTGAGAAGAACCACCAGGGAGAAGGTGAAGGAGGAGA  50

seq1  AGCCGCCCTGGGTTATATGAGCTCAAGAAAGGATGGCCCTGAGCCAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGCCCTGGGTTATATGAGCTCAAGAAAGGATGGCCCTGAGCCAGGCA  100

seq1  GTGGCAGCGCATGCATTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGCGCATGCATTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGG  150

seq1  GAGGCAGAGGCAGGTGGATTTCTGGGTTTGAGGCCAGGCTGGTCTACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGTGGATTTCTGGGTTTGAGGCCAGGCTGGTCTACAGA  200

seq1  GTGAGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCCTGTCTCGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCCTGTCTCGAAA  250

seq1  AACAAAACAACAAAACAAAAACAAAAACCTTAGCCCTGAGTGCTGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAACAAAACAAAAACAAAAACCTTAGCCCTGAGTGCTGGACAG  300

seq1  TTGGAGTTAAGAGCAGCCCAGATGAATCAGAGCAAGTAATAACTTATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTAAGAGCAGCCCAGATGAATCAGAGCAAGTAATAACTTATTAT  350

seq1  AGGAAGTAGATTCTAACAGTAGAGGGTAGATATCTACCCAGCTCCTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTAGATTCTAACAGTAGAGGGTAGATATCTACCCAGCTCCTATTT  400

seq1  AAGGCTTATTCTAAATATAAAGGTTATGTGTGTCTTTTATCCGGTAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTATTCTAAATATAAAGGTTATGTGTGTCTTTTATCCGGTAGCTA  450

seq1  CATGGTCCAAGGTGGAGTAGAAGGGTCAGGATTAAAAATTTCTACAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCCAAGGTGGAGTAGAAGGGTCAGGATTAAAAATTTCTACAACAG  500

seq1  GGAACTTGCTTACAGTTATGTGAGCCTACAGGGTGTGTGTGT-GGTGTGT  549
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGAACTTGCTTACAGTTATGTGAGCCTACAGGGTGTGTGTGTGGGTGTGT  550

seq1  GTGTGGTGTGTGTGTG  565
      |||||           
seq2  GTGTG-----------  555