BAC Information

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BAC

Clone NameB6Ng01-184E18
Chromosome7 (Build37)
Map Location 99,804,870 - 99,895,072
singlet/doubletdoublet
Overlap genePcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30
Upstream geneDlg2, Ccdc90b, Ankrd42
Downstream gene4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184E18.bB6Ng01-184E18.g
ACCGA009709GA009710
length1,1481,129
definitionB6Ng01-184E18.b B6Ng01-184E18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,893,943 - 99,895,072)(99,804,870 - 99,806,032)
sequence
gaattcttcatgctacagaaaaatctttctttgccaaggaaaaatattgt
aaatagttcacccaactgtatttatctggtgtgatgttgctgatctgtaa
aattcaaaagtccattgattaagggaatattattggtcgttagaatgatt
ttggggaaactaatttgaatttaggaagctgagccctaaaagaaaccaaa
actgaaatacttctggatttccctaaacttatccacaaaacatctcaaag
actatatataagtctcagaaaatgaactgctagcagccatttacatttga
catttcattattacaagctgcagctttcaatacattgaaaattttcttta
tttagaaagtttccttagagggactggagagattgttcagaggttgagag
cactgactgctcttccagggatcctgagtgcaattcccagcaactacatg
gtggctcacaaccatctataatgagatctgacactctcttctggtgtgca
ggcatatatgcaggcagcacactatgtacataataaatgaataaatctga
aagaaagagagagagagagagagagagagagagagagagagagagagaga
gagaatccttagtagttaataaacatgcaaagtccctaatttgtgcaagg
cctgggaactcctccctagggctgttccttgccttcaattctagagctga
aggctaggggccacatcgttaaattcccaccctccaagaatgaatgcctc
ctgaggggttgtgatatcctaggattgcgattcacccctccatttgttca
tgtgtctttcccccttcagagaaatttcttgaaagcaaacactatttcat
gagaggtcgcattcatagcacgatgcacctacatctgggtatactgttgt
gggataaacccattgtatagatgagaaaactaaaccttgaatatgaataa
tgccattcccaatattatacaatcaataaaataagtagtaccctattcct
agcctcaatcacatcttctctttccttagaactaccatgccacaatccca
tacaaccaatgggaagaataaaaacaaagatcttagattgtttccagaaa
ggccttcaaattccaacagaatatcagagcctaacccaccttcttctt
gaattcaacacagaaatgtgcagtgaggccagcaagatagctcagtgggg
aaatgtgcctgccatcaagcctgatgatccctgtgcccacatgggcagaa
gagaaaagtgcttcccaccagttgaccttgacctcaccatggcacatctg
cataccaacacacacaaacacacaaaaatacaattaataaaaaaacagtt
tagtggctgtcagtagagtgcttgcctatcacacacaaagcccttgttta
acccccagcactgggaacaatgggaacgcctgtagttccagcactccata
ggtggagacaggagactcaagttcaaagtcacccactggtacacagagct
cgctatcagtcaatgctaaatgagagctttaaaaaaaaaaaagggggggg
ggtgatgctgaaaagatgcttttgttgttagaagtactttctgttaagct
ctttcagagtacctaagttcaggtcccagcatatatatgaaacagcccac
aggagctccagtgccccgtgtctgacctgtaagttacctggacacccttg
aaaagacaggcacataacacataaattatgatcatttgaaaataaaataa
gtgcacatattccattagagagaaggaaacggaaacgattaagagctaca
atcattttgagtttaagtggcaaacatcaactcccaaaaaaaaactctca
cctcactttcctaatactcaggtgttacattaacaacttattccataaag
tacattcttaaagcttttcccaaatactaaaaacatttaaaaaaaaagaa
aagaaaaaagaaagaaaaaattaagtcaaccttgaaaattaacctccaca
gacagaatttgagagcagcctagactgcaaatctgtcctaaaagtttact
tacctacataattaacacactttagagctggacagcttacctgttgagat
gcctgaatatttcctactgatatggtgtagcaattgccaaaggtttccaa
actgagactctgaagatcttcatcaaatagtgtcagagctctgtatggga
ttcgggaagttgaatttcaggccatgtggtcattaagtcgtctgaagtca
tcaaattgtccggtctttggaactgaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_99893943_99895072
seq2: B6Ng01-184E18.b_41_1188 (reverse)

seq1  AAGAAG-AGGTGGGTAGGGCTCTG-GATTCTGTT-GAATTTG-AGGC--T  44
      |||||| ||||||||  |||||||  |||||||| ||||||| ||||  |
seq2  AAGAAGAAGGTGGGTTAGGCTCTGATATTCTGTTGGAATTTGAAGGCCTT  50

seq1  TCTGG-AACAATCTAAGATCTTTG-TTTTATTCTTCCCA-TGGTTGTATG  91
      ||||| |||||||||||||||||| |||||||||||||| ||||||||||
seq2  TCTGGAAACAATCTAAGATCTTTGTTTTTATTCTTCCCATTGGTTGTATG  100

seq1  GGA-TGTGGCATGGTAG-TCTAAGG-AAGAG-AGATGTGA-TGAGGCTAG  136
      ||| ||||||||||||| ||||||| ||||| |||||||| |||||||||
seq2  GGATTGTGGCATGGTAGTTCTAAGGAAAGAGAAGATGTGATTGAGGCTAG  150

seq1  G-ATAGGGTACTACTTA-TTTATTGA-TGTATAATATTGGGAATGGCA-T  182
      | ||||||||||||||| |||||||| ||||||||||||||||||||| |
seq2  GAATAGGGTACTACTTATTTTATTGATTGTATAATATTGGGAATGGCATT  200

seq1  ATTCATATTCAAGGTTTAGTTTTCTCATCTATACAATGGGTTTATCCCAC  232
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATTCAAGGTTTAGTTTTCTCATCTATACAATGGGTTTATCCCAC  250

seq1  AACAGTATACCCAGATGTAGGTGCATCGTGCTATGAATGCGACCTCTCAT  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATACCCAGATGTAGGTGCATCGTGCTATGAATGCGACCTCTCAT  300

seq1  GAAATAGTGTTTGCTTTCAAGAAATTTCTCTGAAGGGGGAAAGACACATG  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTGTTTGCTTTCAAGAAATTTCTCTGAAGGGGGAAAGACACATG  350

seq1  AACAAATGGAGGGGTGAATCGCAATCCTAGGATATCACAACCCCTCAGGA  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGGAGGGGTGAATCGCAATCCTAGGATATCACAACCCCTCAGGA  400

seq1  GGCATTCATTCTTGGAGGGTGGGAATTTAACGATGTGGCCCCTAGCCTTC  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCATTCTTGGAGGGTGGGAATTTAACGATGTGGCCCCTAGCCTTC  450

seq1  AGCTCTAGAATTGAAGGCAAGGAACAGCCCTAGGGAGGAGTTCCCAGGCC  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAGAATTGAAGGCAAGGAACAGCCCTAGGGAGGAGTTCCCAGGCC  500

seq1  TTGCACAAATTAGGGACTTTGCATGTTTATTAACTACTAAGGATTCTCTC  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAAATTAGGGACTTTGCATGTTTATTAACTACTAAGGATTCTCTC  550

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTC  600

seq1  AGATTTATTCATTTATTATGTACATAGTGTGCTGCCTGCATATATGCCTG  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTCATTTATTATGTACATAGTGTGCTGCCTGCATATATGCCTG  650

seq1  CACACCAGAAGAGAGTGTCAGATCTCATTATAGATGGTTGTGAGCCACCA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAGAAGAGAGTGTCAGATCTCATTATAGATGGTTGTGAGCCACCA  700

seq1  TGTAGTTGCTGGGAATTGCACTCAGGATCCCTGGAAGAGCAGTCAGTGCT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTGCTGGGAATTGCACTCAGGATCCCTGGAAGAGCAGTCAGTGCT  750

seq1  CTCAACCTCTGAACAATCTCTCCAGTCCCTCTAAGGAAACTTTCTAAATA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCTCTGAACAATCTCTCCAGTCCCTCTAAGGAAACTTTCTAAATA  800

seq1  AAGAAAATTTTCAATGTATTGAAAGCTGCAGCTTGTAATAATGAAATGTC  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATTTTCAATGTATTGAAAGCTGCAGCTTGTAATAATGAAATGTC  850

seq1  AAATGTAAATGGCTGCTAGCAGTTCATTTTCTGAGACTTATATATAGTCT  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAATGGCTGCTAGCAGTTCATTTTCTGAGACTTATATATAGTCT  900

seq1  TTGAGATGTTTTGTGGATAAGTTTAGGGAAATCCAGAAGTATTTCAGTTT  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATGTTTTGTGGATAAGTTTAGGGAAATCCAGAAGTATTTCAGTTT  950

seq1  TGGTTTCTTTTAGGGCTCAGCTTCCTAAATTCAAATTAGTTTCCCCAAAA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCTTTTAGGGCTCAGCTTCCTAAATTCAAATTAGTTTCCCCAAAA  1000

seq1  TCATTCTAACGACCAATAATATTCCCTTAATCAATGGACTTTTGAATTTT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTAACGACCAATAATATTCCCTTAATCAATGGACTTTTGAATTTT  1050

seq1  ACAGATCAGCAACATCACACCAGATAAATACAGTTGGGTGAACTATTTAC  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCAGCAACATCACACCAGATAAATACAGTTGGGTGAACTATTTAC  1100

seq1  AATATTTTTCCTTGGCAAAGAAAGATTTTTCTGTAGCATGAAGAATTC  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTCCTTGGCAAAGAAAGATTTTTCTGTAGCATGAAGAATTC  1148

seq1: chr7_99804870_99806032
seq2: B6Ng01-184E18.g_64_1192

seq1  GAATTCAACACAGAAATGTGCAGTGAGGCCAGCAAGATAGCTCAGTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACAGAAATGTGCAGTGAGGCCAGCAAGATAGCTCAGTGGGG  50

seq1  AAATGTGCCTGCCATCAAGCCTGATGATCCCTGTGCCCACATGGGCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGCCTGCCATCAAGCCTGATGATCCCTGTGCCCACATGGGCAGAA  100

seq1  GAGAAAAGTGCTTCCCACCAGTTGACCTTGACCTCACCATGGCACATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGTGCTTCCCACCAGTTGACCTTGACCTCACCATGGCACATCTG  150

seq1  CATACCAACACACACAAACACACAAAAATACAATTAATAAAAAAACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAACACACACAAACACACAAAAATACAATTAATAAAAAAACAGTT  200

seq1  TAGTGGCTGTCAGTAGAGTGCTTGCCTATCACACACAAAGCCCTTGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCTGTCAGTAGAGTGCTTGCCTATCACACACAAAGCCCTTGTTTA  250

seq1  ACCCCCAGCACTGGGAACAATGGGAACGCCTGTAGTTCCAGCACTCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGCACTGGGAACAATGGGAACGCCTGTAGTTCCAGCACTCCATA  300

seq1  GGTGGAGACAGGAGACTCAAGTTCAAAGTCACCCACTGGTACACAGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGACAGGAGACTCAAGTTCAAAGTCACCCACTGGTACACAGAGCT  350

seq1  CGCTATCAGTCAATGCTAAATGAGAGCTTTAAAAAAAAAAAAGGGGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTATCAGTCAATGCTAAATGAGAGCTTTAAAAAAAAAAAAGGGGGGGG  400

seq1  GGTGATGCTGAAAAGATGCTTTTGTTGTTAGAAGTACTTTCTGTTAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGCTGAAAAGATGCTTTTGTTGTTAGAAGTACTTTCTGTTAAGCT  450

seq1  CTTTCAGAGTACCTAAGTTCAGGTCCCAGCATATATATGAAACAGCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGTACCTAAGTTCAGGTCCCAGCATATATATGAAACAGCCCAC  500

seq1  AGGAGCTCCAGTGCCCCGTGTCTGACCTGTAAGTTACCTGGACACCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTCCAGTGCCCCGTGTCTGACCTGTAAGTTACCTGGACACCCTTG  550

seq1  AAAAGACAGGCACATAACACATAAATTATGATCTTTTGAAAATAAAATAA  600
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAAAGACAGGCACATAACACATAAATTATGATCATTTGAAAATAAAATAA  600

seq1  GTGCACATATTCCATTAGAGAGAAGGAAACGGAAACGATTAAGAGCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATATTCCATTAGAGAGAAGGAAACGGAAACGATTAAGAGCTACA  650

seq1  ATCATTTTGAGTTTAAGTGGCAAACATCAACTCCCAAAAAAAAACTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTGAGTTTAAGTGGCAAACATCAACTCCCAAAAAAAAACTCTCA  700

seq1  CCTCACTTTCCTAATACTCAGGTGTTACATTAACAACTTATTCCATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTTTCCTAATACTCAGGTGTTACATTAACAACTTATTCCATAAAG  750

seq1  TACATTCTTAAAGCTTTTCCCAAATACTAAAAACATTTAAAAAAAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  TACATTCTTAAAGCTTTTCCCAAATACTAAAAACATTT--AAAAAAAAAG  798

seq1  AAAAAGAAAAAAAAGAAAAGAAAAAAATTAAGTCAACCTTGAAAATTAAC  850
      |||   | ||||||||||   |||||||||||||||||||||||||||||
seq2  AAA---AGAAAAAAGAAA--GAAAAAATTAAGTCAACCTTGAAAATTAAC  843

seq1  CTCCACAGACAGAATTTGAGAGCAGCCTAGACTGCAAATCTGTCCTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGACAGAATTTGAGAGCAGCCTAGACTGCAAATCTGTCCTAAAA  893

seq1  GTTTACTTACCTACATAATTAACACAACTTTAGAGCTGGACAGCTTACCT  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTTTACTTACCTACATAATTAACAC-ACTTTAGAGCTGGACAGCTTACCT  942

seq1  GTTGAGATGCCTGAATATTTCCTACTGATATTGGTGTAGGCAAATTGCCA  1000
      |||||||||||||||||||||||||||||| ||||||||   ||||||||
seq2  GTTGAGATGCCTGAATATTTCCTACTGATA-TGGTGTAG--CAATTGCCA  989

seq1  AA-GTTTCCAAACTGAGAACTCTGAAGATTCTTTTCATCAAAATAGTGTC  1049
      || |||||||||||||| ||||||||||   | |||||| ||||||||| 
seq2  AAGGTTTCCAAACTGAG-ACTCTGAAGA---TCTTCATC-AAATAGTGT-  1033

seq1  CAGAAGCTCTGTTAATGGGATTTGGGAAATTCTGATTTCCAGGGCCATGT  1099
      ||| ||||||||  |||||||| ||||| |  ||| || || ||||||||
seq2  CAG-AGCTCTGT--ATGGGATTCGGGAAGT--TGAATTTCA-GGCCATGT  1077

seq1  GGTCCATTAAAATTTGGTCCT-TGAGGTGTATCAAATATTTGTTCGTGTC  1148
      ||| ||||||      ||| | ||| ||  ||||||   |||| || |||
seq2  GGT-CATTAA------GTCGTCTGAAGT-CATCAAA---TTGTCCG-GTC  1115

seq1  TTTGGAACTGTAATC  1163
      |||||||||| ||||
seq2  TTTGGAACTG-AATC  1129