BAC Information

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BAC

Clone NameB6Ng01-184I16
Chromosome7 (Build37)
Map Location 31,546,187 - 31,721,958
singlet/doubletdoublet
Overlap geneDmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1
Upstream geneZfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn
Downstream geneHamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184I16.bB6Ng01-184I16.g
ACCGA009891GA009892
length1,0711,134
definitionB6Ng01-184I16.b B6Ng01-184I16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,546,187 - 31,547,248)(31,720,818 - 31,721,958)
sequence
gaattcagcagtgctaaccctgtgtaaaccgctaagatggagctatctgc
tgaggaatagacaagctaccattcctcccctgaagctggagttaaaggtg
cttttgagctacttgaaatgagtgctgggaactgaactgaggtcctctgg
aagagcatcaaacactcctaacctttctctagctaaccttcctttatcac
acacacacacacacacacacacacacacacacacacacacaccccaggaa
ctgcagccagctacgaaaaatgctattgtttacttttctctgtttttttt
tttttttttttctggtaatatgttcctaggagagatgatcattgtttctt
attttacgagtgatataaagtattttgtttattttttacatcattatcac
catcatcattgtgtgtctctatctcgcctgtgtgtgtgcaccatggtgca
tgtgtggaagtcagaggaccacttttcaatcctccatgtgaggtcagagg
atcaaattcagatggttagccttcgtggcaagtgcctttacctgctaagc
catcttgccaactcctaaaatgttttcctatagcattctttgtcattgtt
gtttgtttgagattgggtcttgttatgtagcctgggctggtcttgaacta
gtgattctcctgactcaactttctaagtgctgagatgtgttgccaccatg
ttgggctctaataatagcctaaaagtaagctggtatataggaagtaagta
ccaacggagatgggtcagggcaggctgcaggaccaggaagtgaagcctgg
ccagattaaccacgaaagagcttttaagtcagtgagcactgtcctgagtt
tcctcttctacccaacccatgagtgggatcagggactagaggctctgggt
actcagcctggggacccagatttcctcctgcaccctctcttcctacattg
cttccagagcaaaaccaaaattagttctatctagacaagccaggttgggt
gtgacccctctgaagtgacaaataaggcttcaaggcgccttgggcctctg
caagagttgggccctgggctc
gaattcagcatgaccaagttgttgtcaggacattggaaagatggcacagg
aagaatcattgctgtgaaaaggatagggcagaggagaactatgaagtcac
taaggccaaattgggaggcacctgacagagtgaccaagcagaggtagtag
gctccacctgttcccagaccctgaagtccctgaagggaacgggcaaggtg
tgtggtcagttctgaagagagaggtgactgccctcacccacccctctcac
ttaaggctgggccaattttccacttttcccgacctcatgaggaaatgcca
cttgctgtttcccacagcccatcaggcgcagggcccagctcccctcagac
gtagccagccactgcagccctcctgacaagaggatggagggctatgagat
ttggggtgccagggtcttgtatatcccagcagtaggaggactgtgcctgg
gggtgatgcagggctgggaagccttgctagagcgagctgtggaactggct
ccagtcaggaggctcctggcaggtctcctgagcatacaacaagccagagg
aaagcacagctgtctgccagacagttgtcactcagcatagctaacagtaa
gaggtatggcctctaaggtatggtgttcacattcctgggcgaggtgaagt
cccctgggtcagggactcgggcatagctcttgtctggagactctatcttg
cccagtctgtggaggaagattttaaacaggggtaagccatcatcagattt
tcacattaaagatgaaaaggagctgagatggagctcagttagtagagtgt
ggccttcccttcccagcactgagtaaaacttcgcaatagtggctgcttag
agaatggaggcaagcaggtcagaagttcagaatcatcctcggctacatag
tttgagccaagcctggtctacatgagactattcccaagggaccaaaaaaa
aaaagaaaagcaaattagagaagcaggagtctggtggacatagagaatga
gccatagggttacagagccgtggggttgtgctggatcttgcataaggggt
gtttagtaacgggtttcatttcctgccaacatcatgaccagagcagttgg
ggaagcaacggtttattcgcttacacgttccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_31546187_31547248
seq2: B6Ng01-184I16.b_48_1118

seq1  GAATTCAGCAGTGCTAACCCTGTGTAAACCGCTAAGATGGAGCTATCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGTGCTAACCCTGTGTAAACCGCTAAGATGGAGCTATCTGC  50

seq1  TGAGGAATAGACAAGCTACCATTCCTCCCCTGAAGCTGGAGTTAAAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATAGACAAGCTACCATTCCTCCCCTGAAGCTGGAGTTAAAGGTG  100

seq1  CTTTTGAGCTACTTGAAATGAGTGCTGGGAACTGAACTGAGGTCCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGCTACTTGAAATGAGTGCTGGGAACTGAACTGAGGTCCTCTGG  150

seq1  AAGAGCATCAAACACTCCTAACCTTTCTCTAGCTAACCTTCCTTTATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATCAAACACTCCTAACCTTTCTCTAGCTAACCTTCCTTTATCAC  200

seq1  ACACACACACACACACACACACACACACACACACACACACACCCCAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACCCCAGGAA  250

seq1  CTGCAGCCAGCTACGAAAAATGCTATTGTTTACTTTTCTCTGTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCAGCTACGAAAAATGCTATTGTTTACTTTTCTCTGTTTTTTTT  300

seq1  TTTTTTTTTTTCTGGTAATATGTTCCTAGGAGAGATGATCATTGTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTCTGGTAATATGTTCCTAGGAGAGATGATCATTGTTTCTT  350

seq1  ATTTTACGAGTGATATAAAGTATTTTGTTTATTTTTTACATCATTATCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACGAGTGATATAAAGTATTTTGTTTATTTTTTACATCATTATCAC  400

seq1  CATCATCATTGTGTGTCTCTATCTCGCCTGTGTGTGTGCACCATGGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATTGTGTGTCTCTATCTCGCCTGTGTGTGTGCACCATGGTGCA  450

seq1  TGTGTGGAAGTCAGAGGACCACTTTTCAATCCTCCATGTGAGGTCAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGAAGTCAGAGGACCACTTTTCAATCCTCCATGTGAGGTCAGAGG  500

seq1  ATCAAATTCAGATGGTTAGCCTTCGTGGCAAGTGCCTTTACCTGCTAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTCAGATGGTTAGCCTTCGTGGCAAGTGCCTTTACCTGCTAAGC  550

seq1  CATCTTGCCAACTCCTAAAATGTTTTCCTATAGCATTCTTTGTCATTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCCAACTCCTAAAATGTTTTCCTATAGCATTCTTTGTCATTGTT  600

seq1  GTTTGTTTGAGATTGGGTCTTGTTATGTAGCCTGGGCTGGTCTTGAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGAGATTGGGTCTTGTTATGTAGCCTGGGCTGGTCTTGAACTA  650

seq1  GTGATTCTCCTGACTCAACTTTCTAAGTGCTGAGATGTGTTGCCACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCTCCTGACTCAACTTTCTAAGTGCTGAGATGTGTTGCCACCATG  700

seq1  TTGGGCTCTAATAATAGCCTAAAAGTAAGCTGGTATATAGGAAGTAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTCTAATAATAGCCTAAAAGTAAGCTGGTATATAGGAAGTAAGTA  750

seq1  CCAACGGAGATGGGTCAGGGCAGGCTGCAGGACCAGGAAGTGAAGCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACGGAGATGGGTCAGGGCAGGCTGCAGGACCAGGAAGTGAAGCCTGG  800

seq1  CCAGATTAACCACGAAAGAGCTTTTAAGTCAGTGAGCACTGTCCTGAG-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCAGATTAACCACGAAAGAGCTTTTAAGTCAGTGAGCACTGTCCTGAGTT  850

seq1  TCCTCTTCTACCCAACCCATGAGTGGGATCAGGGACTAGAGGCTCT-GGT  898
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCCTCTTCTACCCAACCCATGAGTGGGATCAGGGACTAGAGGCTCTGGGT  900

seq1  ACTCAGCCTGGGGACCCAGATTTCCTCCTGCACCCTCTCTTCCTACATTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCCTGGGGACCCAGATTTCCTCCTGCACCCTCTCTTCCTACATTG  950

seq1  C-TCCAGAGCAAAACCAAAATTAGTTCTATCTAGACAAGCCAGGGTTGGT  997
      | |||||||||||||||||||||||||||||||||||||||||| | |||
seq2  CTTCCAGAGCAAAACCAAAATTAGTTCTATCTAGACAAGCCAGGTTGGGT  1000

seq1  GTGA-CACTCTGAAGTGACAGATAAGGCT--CAGGCG-CTTGGG-CTCTG  1042
      |||| | ||||||||||||| ||||||||   ||||| |||||| |||||
seq2  GTGACCCCTCTGAAGTGACAAATAAGGCTTCAAGGCGCCTTGGGCCTCTG  1050

seq1  CCAGAGGTGGG-CCTGGGCTC  1062
      | |||| |||| |||||||||
seq2  CAAGAGTTGGGCCCTGGGCTC  1071

seq1: chr7_31720818_31721958
seq2: B6Ng01-184I16.g_68_1201 (reverse)

seq1  TGTGG-ACGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTCTTG  49
      ||||| |||||||||| ||||||||| || | |||||||| ||||   ||
seq2  TGTGGAACGTGTAAGC-GAATAAACCGTTGCTTCCCCAAC-TGCT--CTG  46

seq1  GTCATGATGTTTGTGCAGGAATTGAAACCC-TTACTAAAACACCCCTTAT  98
      |||||||||||   ||||||| |||||||| ||||| |||||||||||||
seq2  GTCATGATGTT--GGCAGGAAATGAAACCCGTTACT-AAACACCCCTTAT  93

seq1  GCAAGATCCAGCACA--CCCACGGCTCCTGTAACCCTTATGGCTCATTCT  146
      |||||||||||||||  ||||||||| ||||||||| |||||||||||||
seq2  GCAAGATCCAGCACAACCCCACGGCT-CTGTAACCC-TATGGCTCATTCT  141

seq1  CTATGTCCA-CAGACTCTGGCTTCTCTAATTTTGCTTTTCTTTTTTTTTT  195
      ||||||||| |||||||  |||||||||| ||||||||||  ||||||||
seq2  CTATGTCCACCAGACTCCTGCTTCTCTAA-TTTGCTTTTC--TTTTTTTT  188

seq1  TTTGGTCCCCTTGGAAATAGTCTCATGTAGACCAGGCTTGGCTCAAACTA  245
      |||||| ||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTGGT-CCCTTGGGAATAGTCTCATGTAGACCAGGCTTGGCTCAAACTA  237

seq1  TGTAGCCGAGGATGATTCTGAACTTCTGACCTGCTTGCCTCCATTCTCTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCGAGGATGATTCTGAACTTCTGACCTGCTTGCCTCCATTCTCTA  287

seq1  AGCAGCCACTATTGCGAAGTTTTACTCAGTGCTGGGAA-GGAAGGCCACA  344
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGCAGCCACTATTGCGAAGTTTTACTCAGTGCTGGGAAGGGAAGGCCACA  337

seq1  CTCTACTAACTGAGCTCCATCTCAGCTCCTTTTCATCTTTAATGTGAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTAACTGAGCTCCATCTCAGCTCCTTTTCATCTTTAATGTGAAAA  387

seq1  TCTGATGATGGCTTACCCCTGTTTAAAATCTTCCTCCACAGACTGGGCAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGATGGCTTACCCCTGTTTAAAATCTTCCTCCACAGACTGGGCAA  437

seq1  GATAGAGTCTCCAGACAAGAGCTATGCCCGAGTCCCTGACCCAGGGGACT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGTCTCCAGACAAGAGCTATGCCCGAGTCCCTGACCCAGGGGACT  487

seq1  TCACCTCGCCCAGGAATGTGAACACCATACCTTAGAGGCCATACCTCTTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCGCCCAGGAATGTGAACACCATACCTTAGAGGCCATACCTCTTA  537

seq1  CTGTTAGCTATGCTGAGTGACAACTGTCTGGCAGACAGCTGTGCTTTCCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGCTATGCTGAGTGACAACTGTCTGGCAGACAGCTGTGCTTTCCT  587

seq1  CTGGCTTGTTGTATGCTCAGGAGACCTGCCAGGAGCCTCCTGACTGGAGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGTTGTATGCTCAGGAGACCTGCCAGGAGCCTCCTGACTGGAGC  637

seq1  CAGTTCCACAGCTCGCTCTAGCAAGGCTTCCCAGCCCTGCATCACCCCCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCACAGCTCGCTCTAGCAAGGCTTCCCAGCCCTGCATCACCCCCA  687

seq1  GGCACAGTCCTCCTACTGCTGGGATATACAAGACCCTGGCACCCCAAATC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTCCTCCTACTGCTGGGATATACAAGACCCTGGCACCCCAAATC  737

seq1  TCATAGCCCTCCATCCTCTTGTCAGGAGGGCTGCAGTGGCTGGCTACGTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCCCTCCATCCTCTTGTCAGGAGGGCTGCAGTGGCTGGCTACGTC  787

seq1  TGAGGGGAGCTGGGCCCTGCGCCTGATGGGCTGTGGGAAACAGCAAGTGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGAGCTGGGCCCTGCGCCTGATGGGCTGTGGGAAACAGCAAGTGG  837

seq1  CATTTCCTCATGAGGTCGGGAAAAGTGGAAAATTGGCCCAGCCTTAAGTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTCATGAGGTCGGGAAAAGTGGAAAATTGGCCCAGCCTTAAGTG  887

seq1  AGAGGGGTGGGTGAGGGCAGTCACCTCTCTCTTCAGAACTGACCACACAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGTGGGTGAGGGCAGTCACCTCTCTCTTCAGAACTGACCACACAC  937

seq1  CTTGCCCGTTCCCTTCAGGGACTTCAGGGTCTGGGAACAGGTGGAGCCTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCGTTCCCTTCAGGGACTTCAGGGTCTGGGAACAGGTGGAGCCTA  987

seq1  CTACCTCTGCTTGGTCACTCTGTCAGGTGCCTCCCAATTTGGCCTTAGTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCTGCTTGGTCACTCTGTCAGGTGCCTCCCAATTTGGCCTTAGTG  1037

seq1  ACTTCATAGTTCTCCTCTGCCCTATCCTTTTCACAGCAATGATTCTTCCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATAGTTCTCCTCTGCCCTATCCTTTTCACAGCAATGATTCTTCCT  1087

seq1  GTGCCATCTTTCCAATGTCCTGACAACAACTTGGTCATGCTGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATCTTTCCAATGTCCTGACAACAACTTGGTCATGCTGAATTC  1134