BAC Information

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BAC

Clone NameB6Ng01-185A23
Chromosome7 (Build37)
Map Location 71,936,664 - 71,937,553
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik
Downstream geneNdnl2, Tjp1, Gm1693, EG665234, Tarsl2, Tm2d3, LOC665241
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185A23.bB6Ng01-185A23.g
ACCGA010275GA010276
length993988
definitionB6Ng01-185A23.b B6Ng01-185A23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcgtctctcccgattttttttttttttaacttccattacattt
tattttattttaattaggtattttcctcgtttacattttcaatgctatcc
caaaggtcccccatacacacacccccactcccctacccacccacttcccc
tttttggccctggcgttcccctgtactggggcatataaagtttgcaagtc
cagtgggcctctctttgcagtgatggctgactaggccgtcttttgataca
tatgcagctagagtcaagagctccagggtactggttagttcatattgttg
ttccacctatagggttgcagttcccattagctccttgggtaatttctcta
gctcctccattgggggccgtgtgacccatccaatagctgaccgtgatcat
ccacttctgtgtttgctaggccccagcatagtctcacaagagacagctat
atctgggtcctttcagcaaaatcttgctagtgtatgcaatggtgtcagca
tttggaacctgattatgggatggatccctgcatatggcaatcactagatg
gtccatcctttcgtcacagctccaaattttgtctctgtaactccttccat
gggtgttttgttcccatttctaagaaagggtaaagtgtccacactttggt
cttcgttcttcttgaatttcatgtgtttggcaagttgtatcttatatctt
gggtatcctaagtttctaggctaatatccacttatcagtgagtacatatt
gtatgagttcctttgtgattgggttaccttactcaaggatgatgccctcc
aggtccatccattttgcctaggaatttcataagttcatttttttaatagc
tgagtagtattccattgtgtaaatgtaccacattttctgtatccattcct
ctgttgaggggcatcttggttctttccagcttctggctattataaataaa
ggctgctatgtacatagtggagcatgtgtcctttctttaccgg
gaattcctagagacaggtgtcagtaaggggcactcacagatctacacact
aggaaacccgaagctcacttggatgcctttgtctttctgggactgccctt
gtacagatgacacgctcctagattcctttctactggttcatgtactcgtt
tttctctcttctgacatattatctctctctgtataatgaaaggggtttcg
aaggccattatcagcaagggtgttataagtgaaactgagatccggagaca
acacatatctgatgtaattggatgtgggtggccttgggctttacctggaa
tatcgtcttagatatctactccttggactggttcctgccttggcgtgtct
gacactgaccgagcactctgacctgacatttactgatctgtgttgcggga
gggaggcagtctgccatggctgtgggcacgcctccaagtccctgctgact
gagacctcgattgctctgcacagctcacttccctgggctgactttgcaat
gagcaatctgaagaaagaggaaggaggtgacatgtacccaggcaaagtgt
aagtttggaatgcaggcactgactcctcaggttttacattcctcctctgt
cacccgaatcaccgtgtgtgcaggcatcagaatccccatgtgtacaagag
tctatgatgggagctctgaccaagggcagacacagatcaactctgcacaa
tgcttctgtcgtgagcaattggacttcccatctctaaaccaggagtctcc
tgtctatggccccccaatggaggagctagagaaagtacccaaggagctaa
agggaactgccacccctataggtggaacaacatatatgaactaaccagta
atcccggagctctttgtctcttagcttgcattatgtattcaaagatggtc
ctatgtcagtcattcactgggaaataagatgcctcttgtgacttgtcaaa
cttttattatgctctcagtacaagggaatcactcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_71936664_71937553
seq2: B6Ng01-185A23.g_68_965

seq1  GAATTCCTAGAGACAGGTGTCAGTAAGGGGCACTCACAGATCTACACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGAGACAGGTGTCAGTAAGGGGCACTCACAGATCTACACACT  50

seq1  AGGAAACCCGAAGCTCACTTGGATGCCTTTGTCTTTCTGGGACTGCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACCCGAAGCTCACTTGGATGCCTTTGTCTTTCTGGGACTGCCCTT  100

seq1  GTACAGATGACACGCTCCTAGATTCCTTTCTACTGGTTCATGTACTCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGATGACACGCTCCTAGATTCCTTTCTACTGGTTCATGTACTCGTT  150

seq1  TTTCTCTCTTCTGACATATTATCTCTCTCTGTATAATGAAAGGGGTTTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTTCTGACATATTATCTCTCTCTGTATAATGAAAGGGGTTTCG  200

seq1  AAGGCCATTATCAGCAAGGGTGTTATAAGTGAAACTGAGATCCGGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATTATCAGCAAGGGTGTTATAAGTGAAACTGAGATCCGGAGACA  250

seq1  ACACATATCTGATGTAATTGGATGTGGGTGGCCTTGGGCTTTACCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATCTGATGTAATTGGATGTGGGTGGCCTTGGGCTTTACCTGGAA  300

seq1  TATCGTCTTAGATATCTACTCCTTGGACTGGTTCCTGCCTTGGCGTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGTCTTAGATATCTACTCCTTGGACTGGTTCCTGCCTTGGCGTGTCT  350

seq1  GACACTGACCGAGCACTCTGACCTGACATTTACTGATCTGTGTTGCGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGACCGAGCACTCTGACCTGACATTTACTGATCTGTGTTGCGGGA  400

seq1  GGGAGGCAGTCTGCCATGGCTGTGGGCACGCCTCCAAGTCCCTGCTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGTCTGCCATGGCTGTGGGCACGCCTCCAAGTCCCTGCTGACT  450

seq1  GAGACCTCGATTGCTCTGCACAGCTCACTTCCCTGGGCTGACTTTGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTCGATTGCTCTGCACAGCTCACTTCCCTGGGCTGACTTTGCAAT  500

seq1  GAGCAATCTGAAGAAAGAGGAAGGAGGTGACATGTACCCAGGCAAAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATCTGAAGAAAGAGGAAGGAGGTGACATGTACCCAGGCAAAGTGT  550

seq1  AAGTTTGGAATGCAGGCACTGACTCCTCAGGTTTTACATTCCTCCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGAATGCAGGCACTGACTCCTCAGGTTTTACATTCCTCCTCTGT  600

seq1  CACCCGAATCACCGTGTGTGCAGGCATCAGAATCCCCATGTGTACAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCGAATCACCGTGTGTGCAGGCATCAGAATCCCCATGTGTACAAGAG  650

seq1  TCTATGATGGGAGCTCTGACCAAGGGCAGACACAGATCAACTCTGCACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGATGGGAGCTCTGACCAAGGGCAGACACAGATCAACTCTGCACAA  700

seq1  TGCTTCTGTCGTGAGCAATTGGACTTCCCATCTCTAAACCAGGAGTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGTCGTGAGCAATTGGACTTCCCATCTCTAAACCAGGAGTCTCC  750

seq1  TGTCTATGG-CCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAA  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGGCCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAA  800

seq1  AGGGAACTGCCA-CCCTATAGGTGGAACAACA-ATATGAACTAACCAGT-  846
      |||||||||||| ||||||||||||||||||| |||||||||||||||| 
seq2  AGGGAACTGCCACCCCTATAGGTGGAACAACATATATGAACTAACCAGTA  850

seq1  ATCCCGGAGCTC-TTGTCTC-TAGC-TGCA-TATGTATCAAAAGATGG  890
      |||||||||||| ||||||| |||| |||| |||||||  ||||||||
seq2  ATCCCGGAGCTCTTTGTCTCTTAGCTTGCATTATGTATTCAAAGATGG  898