BAC Information

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BAC

Clone NameB6Ng01-185F08
Chromosome7 (Build37)
Map Location 148,031,985 - 148,147,035
singlet/doubletdoublet
Overlap geneScgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1
Upstream geneGpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik
Downstream geneLOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185F08.bB6Ng01-185F08.g
ACCGA010477GA010478
length760364
definitionB6Ng01-185F08.b B6Ng01-185F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,031,985 - 148,032,743)(148,146,666 - 148,147,035)
sequence
gaattcctgcaaacactcctggtggggaccccggaagaactctacgaagg
gcccctgggcaagtacaatgtcaatgacatggccaagtcagcgctgagcg
agctcaagtcctgcatcgatgaactacagcctgtgcataaggagcaactg
gtcaagctgctggtaatcgggctgggactcccatccccgaatgtttgcag
ttcttccgagaccctcctggtgctggatcaccagtcctccccgatcccca
gatctccatcagccagcagagatggagacctcgcagagaagtttccaaag
tctcttagaactgcttcccccaccccaaaagaactacatcccacctaggc
agtacatgtgcacacagcccctccccagggtgctaggagaggtgggtcac
catgctcaggagtctgtctcctccactggtgtgcacagcactgtctgccg
ctgggactgggggatccggttgttggttaccaggtctcctggtccccaca
catctctctttcaggtgcaagtgctagatgctcaagaggacacataagca
gacccgaaacacggcttgacttccatgagcgacaggaccagccctacagc
gaccatggatgtgccgcgatcactgcttcttcacgaataaattcaccctc
gaactgttaaatcaatatagcctactgcagtcccatgtgctggcttctct
ctctccctgcaacacagggacacacaaaaagtcctatcagaggcactctg
agagataaac
aatatgtagagcaggctagccttgaactcatagacatctgtctccttctg
cctccccagggctgagattaaaagtgtgtgccaccacacctagcccttgc
ttggcttttaaagccctagatggggagtataagaaatcaagatcatccat
aatattgtataaaaatgtatcagctattgcccagatgtctcatcatgaag
tggtttagacagggaaccttattcagatgaacattttagccaatctgaaa
ggcttccaggtgttcttaattgttaaactgtagggaattactaaatgcat
tcacctattgtgataagatccaactttccaacaagcaatcaaagtaaaag
acaagcggggcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_148031985_148032743
seq2: B6Ng01-185F08.b_35_794

seq1  GAATTCCTGCAAACACTCCTGGTGGGGACCCCGGAAGAACTCTACGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAAACACTCCTGGTGGGGACCCCGGAAGAACTCTACGAAGG  50

seq1  GCCCCTGGGCAAGTACAATGTCAATGACATGGCCAAGTCAGCGCTGAGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGGGCAAGTACAATGTCAATGACATGGCCAAGTCAGCGCTGAGCG  100

seq1  AGCTCAAGTCCTGCATCGATGAACTACAGCCTGTGCATAAGGAGCAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAGTCCTGCATCGATGAACTACAGCCTGTGCATAAGGAGCAACTG  150

seq1  GTCAAGCTGCTGGTAATCGGGCTGGGACTCCCATCCCCGAATGTTTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCTGCTGGTAATCGGGCTGGGACTCCCATCCCCGAATGTTTGCAG  200

seq1  TTCTTCCGAGACCCTCCTGGTGCTGGATCACCAGTCCTCCCCGATCCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCGAGACCCTCCTGGTGCTGGATCACCAGTCCTCCCCGATCCCCA  250

seq1  GATCTCCATCAGCCAGCAGAGATGGAGACCTCGCAGAGAAGTTTCCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCATCAGCCAGCAGAGATGGAGACCTCGCAGAGAAGTTTCCAAAG  300

seq1  TCTCTTAGAACTGCTTCCCCCACCCCAAAAGAACTACATCCCACCTAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGAACTGCTTCCCCCACCCCAAAAGAACTACATCCCACCTAGGC  350

seq1  AGTACATGTGCACACAGCCCCTCCCCAGGGTGCTAGGAGAGGTGGGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATGTGCACACAGCCCCTCCCCAGGGTGCTAGGAGAGGTGGGTCAC  400

seq1  CATGCTCAGGAGTCTGTCTCCTCCACTGGTGTGCACAGCACTGTCTGCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCAGGAGTCTGTCTCCTCCACTGGTGTGCACAGCACTGTCTGCCG  450

seq1  CTGGGACTGGGGGATCCGGTTGTTGGTTACCAGGTCTCCTGGTCCCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACTGGGGGATCCGGTTGTTGGTTACCAGGTCTCCTGGTCCCCACA  500

seq1  CATCTCTCTTTCAGGTGCAAGTGCTAGATGCTCAAGAGGACACATAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTTTCAGGTGCAAGTGCTAGATGCTCAAGAGGACACATAAGCA  550

seq1  GACCCGAAACACGGCTTGACTTCCATGAGCGACAGGACCAGCCCTACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCGAAACACGGCTTGACTTCCATGAGCGACAGGACCAGCCCTACAGC  600

seq1  GACCATGGATGTGCCGCGATCACTGCTTCTTCACGAATAAATTCACCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGGATGTGCCGCGATCACTGCTTCTTCACGAATAAATTCACCCTC  650

seq1  GAACTGTTAAATCAATAAAGCCTACTGCAG-CCCATGTGCTGGCTTCTCT  699
      ||||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  GAACTGTTAAATCAATATAGCCTACTGCAGTCCCATGTGCTGGCTTCTCT  700

seq1  CTCTCCCTGCAACACAGGGACACACAAAAAGTCCTATCAGAGGCACCCTG  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCTCCCTGCAACACAGGGACACACAAAAAGTCCTATCAGAGGCACTCTG  750

seq1  AGAGATAAAC  759
      ||||||||||
seq2  AGAGATAAAC  760

seq1: chr7_148146666_148147035
seq2: B6Ng01-185F08.g_68_437 (reverse)

seq1  CATGCCCCGCTTGTCTTTTACTTTGATTGCTTGTTGGAAAGTTGGATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCCGCTTGTCTTTTACTTTGATTGCTTGTTGGAAAGTTGGATCTT  50

seq1  ATCACAATAGGTGAATGCATTTAGTAATTCCCTACAGTTTAACAATTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATAGGTGAATGCATTTAGTAATTCCCTACAGTTTAACAATTAAG  100

seq1  AACACCTGGAAGCCTTTCAGATTGGCTAAAATGTTCATCTGAATAAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGGAAGCCTTTCAGATTGGCTAAAATGTTCATCTGAATAAGGTT  150

seq1  CCCTGTCTAAACCACTTCATGATGAGACATCTGGGCAATAGCTGATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTAAACCACTTCATGATGAGACATCTGGGCAATAGCTGATACAT  200

seq1  TTTTATACAATATTATGGATGATCTTGATTTCTTATACTCCCCATCTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACAATATTATGGATGATCTTGATTTCTTATACTCCCCATCTAGG  250

seq1  GCTTTAAAAGCCAAGCAAGGGCTAGGTGTGGTGGCACACACTTTTAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAAAGCCAAGCAAGGGCTAGGTGTGGTGGCACACACTTTTAATCT  300

seq1  CAGCCCTGGGGAGGCAGAAGGAGACAGATGTCTATGAGTTCAAGGCTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTGGGGAGGCAGAAGGAGACAGATGTCTATGAGTTCAAGGCTAGC  350

seq1  CTGCTCTACATATTGAATTC  370
      ||||||||||||||||||||
seq2  CTGCTCTACATATTGAATTC  370