BAC Information

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BAC

Clone NameB6Ng01-185F24
Chromosome7 (Build37)
Map Location 32,271,538 - 32,272,600
singlet/doubletsinglet
Overlap genenone
Upstream geneNphs1, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181
Downstream geneLOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185F24.bB6Ng01-185F24.g
ACCGA010507GA010508
length1,0891,172
definitionB6Ng01-185F24.b B6Ng01-185F24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaggatctatagatgttacttctgggaggtgatctcccgtca
gtcaaaagaaccaagactaggtaatgtatttgggaaagaagttaatttgc
ttcatgatctgaaatgttgaaggtcaaggatagggcaagctcaggtagtc
agggacttgtgatgtctgatcccagggtacacagcagaagaataaccgga
tattgtggaagacagagagcagaggctccactctgcttctcaagcaccca
tgatatgctcactgaccaggcctgccacagtggggaacaatactcaacgt
ggctattggtgtgtgcctcatacatgttaatgcataggtggcccttcctt
cggacatgttggtttttgatgcagattgagtatttaggagacaaattacc
caggcaggtggagaaaatgtgttataggtaatgagggcagaccatatgaa
ggccctgccttttgcttgtgtcacacttacagagaaagggtgtcatacct
agtataaagtctctgcaaatgacaaacacagtgttgaaatggtaaattgc
aggtacaggtttacacagagcaatcagatgaccagcaaagttgaaagaaa
tgatgtgaaagtacatggttactttccacctgtgatccccatttgtggga
agctgaggtaggtgtgccccagttacctgtctcgatctccttaatcacaa
agataaaaattgtgctcaggtagggggttgttctaccaagttggcttcca
cctcttccttgccctccatgtttggcaacagtgagcagaagttggctcta
aatgaaatatattttagctaccctctataaaaagacacaaagcctttggt
acatttatttgaagagctataagcctaaattgggttgggtttctgttaca
cttttaacttatattccaatttcataagccccatgttaacttgtctgttc
caagtgtcacccagtatttattttcctgcctccaatcaatctgtcccgaa
atggtccactgatcctgggtaatatgacttttgagccatcaaaccctcat
ggcagccctttcccctctctctatcttgctttaatcctc
gaattctcagctgagaaactttgagtggctgagaagcacgtgaaaagaat
tttcaacatccttaaccatcagggaaatgaaaatagaaacaaccttgtga
ttccacctcacacaaatcaaaatggctaggattaaaaactcagacgacag
gagatgctggcaaggatgtggagaaagaagagtactccaccattgctggt
gggactgcaagctggtacaaccactctggaaatcactttggcaggtcctc
agaaaattgggcatagttctatcagaagatccagcaataccactcatgat
aatataacaagatgatgctccaccatgtaataaggacacatgttccacta
tgttcataacagtctaatttataaaaatcagaaactgggaagaactcaaa
tgtccctcaacagaggaatggacacagaaaatgtggtacatttataaaat
ggagtactactcagctattaaaaaccatgaatttatgaaattcttagaca
aatggatggatctgggggatatcatcctgagtgaggtaactcaatcagaa
aactcaataatatatgatatgcactaactgaaaagtggatattatcccag
aagctcataattcttcttagaaggagaacaacataaccatggaaggagtt
acagagacaaagttaagagcagaaactgaaggaacgaccattcagagact
gacccacttggggatccacccattagtaaccaacaaatctaggcactatg
gcaggtgccaacaggatcctgctaacagaagcctgatatagatgtctcct
gaagtgctctgccagttcctagcaaatacataactggatgtccacaatca
tccattgaacagagcacaaggtaccaatgaaggagctagaaaaagtacca
aaagagcttaaaggggtctgaatgcccaatagaaacatcgatatgaaata
ccagtactttccagatctcttgggaactaaacaactaatcaagaaaaaca
acatgggtcgaaattgtggttcttactgtaaatgtagcagagtgtactgc
tgtttttatgtgtcattgaaacaggccttggggtttatccacagaataag
ccttccagtggatgtgctcatggaatcaagctggtagtcatttttctcaa
attagttgaatcaacgaagcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32271538_32272600
seq2: B6Ng01-185F24.b_43_1131

seq1  GAATTCCAGAGGATCTATAGATGTTACTTCTGGGAGGTGATCTCCCGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGATCTATAGATGTTACTTCTGGGAGGTGATCTCCCGTCA  50

seq1  GTCAAAAGAACCAAGACTAGGTAATGTATTTGGGAAAGAAGTTAATTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGAACCAAGACTAGGTAATGTATTTGGGAAAGAAGTTAATTTGC  100

seq1  TTCATGATCTGAAATGTTGAAGGTCAAGGATAGGGCAAGCTCAGGTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATCTGAAATGTTGAAGGTCAAGGATAGGGCAAGCTCAGGTAGTC  150

seq1  AGGGACTTGTGATGTCTGATCCCAGGGTACACAGCAGAAGAATAACCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTTGTGATGTCTGATCCCAGGGTACACAGCAGAAGAATAACCGGA  200

seq1  TATTGTGGAAGACAGAGAGCAGAGGCTCCACTCTGCTTCTCAAGCACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGAAGACAGAGAGCAGAGGCTCCACTCTGCTTCTCAAGCACCCA  250

seq1  TGATATGCTCACTGACCAGGCCTGCCACAGTGGGGAACAATACTCAACGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGCTCACTGACCAGGCCTGCCACAGTGGGGAACAATACTCAACGT  300

seq1  GGCTATTGGTGTGTGCCTCATACATGTTAATGCATAGGTGGCCCTTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTGGTGTGTGCCTCATACATGTTAATGCATAGGTGGCCCTTCCTT  350

seq1  CGGACATGTTGGTTTTTGATGCAGATTGAGTATTTAGGAGACAAATTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACATGTTGGTTTTTGATGCAGATTGAGTATTTAGGAGACAAATTACC  400

seq1  CAGGCAGGTGGAGAAAATGTGTTATAGGTAATGAGGGCAGACCATATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGTGGAGAAAATGTGTTATAGGTAATGAGGGCAGACCATATGAA  450

seq1  GGCCCTGCCTTTTGCTTGTGTCACACTTACAGAGAAAGGGTGTCATACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGCCTTTTGCTTGTGTCACACTTACAGAGAAAGGGTGTCATACCT  500

seq1  AGTATAAAGTCTCTGCAAATGACAAACACAGTGTTGAAATGGTAAATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGTCTCTGCAAATGACAAACACAGTGTTGAAATGGTAAATTGC  550

seq1  AGGTACAGGTTTACACAGAGCAATCAGATGACCAGCAAAGTTGAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGGTTTACACAGAGCAATCAGATGACCAGCAAAGTTGAAAGAAA  600

seq1  TGATGTGAAAGTACATGG-TACTTTCCACCTGTGATCCCCATTTGTGGGA  649
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGATGTGAAAGTACATGGTTACTTTCCACCTGTGATCCCCATTTGTGGGA  650

seq1  AGCTGAGGTAGGTGTGCCCCAGTTACCTGTCTCGATCTCCTTAATCACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGTAGGTGTGCCCCAGTTACCTGTCTCGATCTCCTTAATCACAA  700

seq1  AGATAAAAATTGTGCTCAGGTAGGGGGTTGTTCTACCAAGTTGGCTTCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAAATTGTGCTCAGGTAGGGGGTTGTTCTACCAAGTTGGCTTCCA  750

seq1  CCTCTTCCTTGCCCTCCATGTTTGGCAACAGTGAGCAGAAGTTGGCTCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCTTGCCCTCCATGTTTGGCAACAGTGAGCAGAAGTTGGCTCTA  800

seq1  AATGAAATATATTTTAGCTACCCTCTAT-AAAAGACACAAAGCC-TTGGT  847
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  AATGAAATATATTTTAGCTACCCTCTATAAAAAGACACAAAGCCTTTGGT  850

seq1  ACA-TTATTTGAAGAGCTATAAGCCTAAATTGGGT--GGGTTCTG-TACA  893
      ||| |||||||||||||||||||||||||||||||  || ||||| ||||
seq2  ACATTTATTTGAAGAGCTATAAGCCTAAATTGGGTTGGGTTTCTGTTACA  900

seq1  CTTTTAACTTATA-TCCAA-TTCATAAGCCCCATGTT-ACTTG-CTG-TC  938
      ||||||||||||| ||||| ||||||||||||||||| ||||| ||| ||
seq2  CTTTTAACTTATATTCCAATTTCATAAGCCCCATGTTAACTTGTCTGTTC  950

seq1  CAAGTGTCACCCAGGA-TTATTT--CTG-CTCC-ATCAATCTG-CCCG-A  981
      |||||||||||||| | ||||||  ||| |||| ||||||||| |||| |
seq2  CAAGTGTCACCCAGTATTTATTTTCCTGCCTCCAATCAATCTGTCCCGAA  1000

seq1  ATGGTCCACTGATCCT-GGTAATATG-CTTTTGAGCCATCAAA-CCTCAT  1028
      |||||||||||||||| ||||||||| |||||||||||||||| ||||||
seq2  ATGGTCCACTGATCCTGGGTAATATGACTTTTGAGCCATCAAACCCTCAT  1050

seq1  GGCAGCC--TTCCCCTCTCTCTATCTT-CTTT-ATCCTC  1063
      |||||||  |||||||||||||||||| |||| ||||||
seq2  GGCAGCCCTTTCCCCTCTCTCTATCTTGCTTTAATCCTC  1089