BAC Information

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BAC

Clone NameB6Ng01-185H09
Chromosome7 (Build37)
Map Location 147,387,512 - 147,482,024
singlet/doubletdoublet
Overlap geneOlfr524, E430002D04Rik, 5830411N06Rik
Upstream geneLrrc27, Pwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523
Downstream geneEG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185H09.bB6Ng01-185H09.g
ACCGA010563GA010564
length9941,060
definitionB6Ng01-185H09.b B6Ng01-185H09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,387,512 - 147,388,496)(147,480,974 - 147,482,024)
sequence
gaattctttcatgagcacagcctttgcatgggttcagggaagggctcctg
agtgggtcctgacctcagacctgggagccatgctgctgcagctggcttgt
agccataagcagaattcaggggctggcgggagggcatgccaatctgttca
ccctgatggactggtgagcaggttcaggactggggaagcatggttcctcc
taggaggaggcgcctagaacctgggctgctcgctgctgtaccttatgtag
cgcttgcttgacctcttggttccgaaggcagtagatgatggggttaatta
ggggtgtgagcactgtgtagacaacagacacaagcttgttgtagtcgaag
gagtagagggcacggggccgggcatagatgaagagagaagctgaatagaa
gatgaccaccacggccaggtgtgaggcgcaggtggagaaggccttctgcc
tgccaccggcggagggcatgcgtagcacggtgctgagaatggccgtgtag
gagaagacagtcaacagcagtggccccaacaagatgagcagcgccaggag
gaagtctacaagctctgcaactgacatgtcagagcaggcaaggttgagta
gtggggacacatcacagaagaagtggttcatgacgttggggccacagtag
cctagacgagaaatgaagaagaccttccccagggaaatggtgaagccaga
caaccaggagcctccagccaggaggctgcagagaccggggctcatgatga
ctgggtagcgaagcgggttgcagaccgccacatagcggtcataggccatg
acacccaagagcgcgcactcggtacaggccagtgccaagaagaagtacag
tttgggccatgcagcctgtgaaggagatgtgctggaacttgggagagacc
aggctgagcaacattcttgggcaccgtgacagagtatgtaccagtatcct
ctagggaaggacagggttggctgagggaagaggtacataggctt
gaattccccagtgcgcatgcctgggcccctaaggtgcttgttgggcagct
cagtaagtggggctctgttcccacacagtgaaacacatctgtcctgatgg
gaccttccacatttccaaagtggcctccttgcggtgtggccactgcatag
ccacagttgagctggtggcagagcacagtggcatctgctaagtcccagtt
ggcagcacagaggggttgccaggcatcctgtaccaaaagctccacgcggc
cctcacagcggctgctgccattgaccagtcggaactctaagggagagttg
gaatcagagccccctccacaatccagagccgcagacacccacaagccatg
agttccttatagacaggacatatgcaatcggagcacacacaaactagcag
gaccgtgtctttgcacagtgtaagtattgaaagttaagtgaggcagctcc
agtgtcctgacctaaataactccatcccttctccccaaacccttgcatcc
tcacactaccacaccactacgctccctaacttggggatcacggtggggaa
actggaaataccaaatatttttgaactgtatacaggacatctctagtgag
atacacacacaaggaagcatgaacagcaggcaattaagtgccctggattc
tgtcagtggaatatacaaaagaattgtttcgtggttttcttttctggtca
ctaaaggaaatctctgtgttacctcaacaaccatttatctatggaaagaa
attccaaaagccatataaatagggtctctataatcctaagcttaatatct
tcagtctgttcagagctaacggagaccatgagaaaaactaagaagtgaca
ggacaatggacaattgttccttgaaaactgaatcttaacaaactgacaag
gaatgaggaaatgaaccaaaaagaaagtgtggggccctagtatatagaaa
tctttggtacatcttgagcagtccctttccccaagtctgggaaaagaaag
caaccacatgagaggaacgaaacattcaaaaagaggttcacaaaacttct
tcggacaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147387512_147388496
seq2: B6Ng01-185H09.b_40_1033

seq1  GAATTCTTTCATGAGCACAGCCTTTGCATGGGTTCAGGGAAGGGCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATGAGCACAGCCTTTGCATGGGTTCAGGGAAGGGCTCCTG  50

seq1  AGTGGGTCCTGACCTCAGACCTGGGAGCCATGCTGCTGCAGCTGGCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTCCTGACCTCAGACCTGGGAGCCATGCTGCTGCAGCTGGCTTGT  100

seq1  AGCCATAAGCAGAATTCAGGGGCTGGCGGGAGGGCATGCCAATCTGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATAAGCAGAATTCAGGGGCTGGCGGGAGGGCATGCCAATCTGTTCA  150

seq1  CCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCTCC  200
      |||||||||||||||||||||||||||||                 ||||
seq2  CCCTGATGGACTGGTGAGCAGGTTCAGGANNNNNNNNNNNNNNNNNCTCC  200

seq1  TAGGAGGAGGCGCCTAGAACCTGGGCTGCTCGCTGCTGTACCTTATGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGAGGCGCCTAGAACCTGGGCTGCTCGCTGCTGTACCTTATGTAG  250

seq1  CGCTTGCTTGACCTCTTGGTTCCGAAGGCAGTAGATGATGGGGTTAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGCTTGACCTCTTGGTTCCGAAGGCAGTAGATGATGGGGTTAATTA  300

seq1  GGGGTGTGAGCACTGTGTAGACAACAGACACAAGCTTGTTGTAGTCGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTGAGCACTGTGTAGACAACAGACACAAGCTTGTTGTAGTCGAAG  350

seq1  GAGTAGAGGGCACGGGGCCGGGCATAGATGAAGAGAGAAGCTGAATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAGGGCACGGGGCCGGGCATAGATGAAGAGAGAAGCTGAATAGAA  400

seq1  GATGACCACCACGGCCAGGTGTGAGGCGCAGGTGGAGAAGGCCTTCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCACCACGGCCAGGTGTGAGGCGCAGGTGGAGAAGGCCTTCTGCC  450

seq1  TGCCACCGGCGGAGGGCATGCGTAGCACGGTGCTGAGAATGGCCGTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCGGCGGAGGGCATGCGTAGCACGGTGCTGAGAATGGCCGTGTAG  500

seq1  GAGAAGACAGTCAACAGCAGTGGCCCCAACAAGATGAGCAGCGCCAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACAGTCAACAGCAGTGGCCCCAACAAGATGAGCAGCGCCAGGAG  550

seq1  GAAGTCTACAAGCTCTGCAACTGACATGTCAGAGCAGGCAAGGTTGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTACAAGCTCTGCAACTGACATGTCAGAGCAGGCAAGGTTGAGTA  600

seq1  GTGGGGACACATCACAGAAGAAGTGGTTCATGACGTTGGGGCCACAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGACACATCACAGAAGAAGTGGTTCATGACGTTGGGGCCACAGTAG  650

seq1  CCTAGACGAGAAATGAAGAAGACCTTCCCCAGGGAAATGGTGAAGCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACGAGAAATGAAGAAGACCTTCCCCAGGGAAATGGTGAAGCCAGA  700

seq1  CAACCAGGAGCCTCCAGCCAGGAGGCTGCAGAGACCGGGGCTCATGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGAGCCTCCAGCCAGGAGGCTGCAGAGACCGGGGCTCATGATGA  750

seq1  CTGGGTAGCGAAGCGGGTTGCAGACCGCCACATAGCGGTCATAGGCCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTAGCGAAGCGGGTTGCAGACCGCCACATAGCGGTCATAGGCCATG  800

seq1  ACACCCAAGAGCGCGCACTCGGTACAGGCCAGTGCCAAGAAGAAGTACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAAGAGCGCGCACTCGGTACAGGCCAGTGCCAAGAAGAAGTACAG  850

seq1  -TTGGGCCATGCAGCCTGTGAAGGAGATGTGCTGGAACTTGGGAGAGACC  899
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCCATGCAGCCTGTGAAGGAGATGTGCTGGAACTTGGGAGAGACC  900

seq1  AGGCTGAGCAACA-TCTTGGGCACCGTGACAGAG-ATGTACCAG-AT-CT  945
      ||||||||||||| |||||||||||||||||||| ||||||||| || ||
seq2  AGGCTGAGCAACATTCTTGGGCACCGTGACAGAGTATGTACCAGTATCCT  950

seq1  CTA-GGAAGGACAGG--TTGCTGA-GGAAGAGGTACATAGGCTT  985
      ||| |||||||||||  | ||||| |||||||||||||||||||
seq2  CTAGGGAAGGACAGGGTTGGCTGAGGGAAGAGGTACATAGGCTT  994

seq1: chr7_147480974_147482024
seq2: B6Ng01-185H09.g_66_1125 (reverse)

seq1  GGGTGTTCG-AGAAGTTTTGTG-ACCTCTTTTTG-ATGTTTCTGTCCTCT  47
      |||||| || |||||||||||| ||||||||||| |||||||  ||||||
seq2  GGGTGTCCGAAGAAGTTTTGTGAACCTCTTTTTGAATGTTTCGTTCCTCT  50

seq1  CATGTGTTTGCTTTTCTTTTCCAGACTTGGGGAAA-GGACTGCTC-AGAT  95
      |||||| |||||||  ||| ||||||||||||||| ||||||||| ||||
seq2  CATGTGGTTGCTTTCTTTTCCCAGACTTGGGGAAAGGGACTGCTCAAGAT  100

seq1  GTACCAAAGATTTCTATATACTTGGGCCCCACACTTTCTTTTTGGTTCAT  145
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTACCAAAGATTTCTATATACTAGGGCCCCACACTTTCTTTTTGGTTCAT  150

seq1  TTCCTCATTCC-TGTCAGTTTGTTAAGATTCAGTTTTCAGGGA--CATTG  192
      ||||||||||| ||||||||||||||||||||||||||| |||   ||||
seq2  TTCCTCATTCCTTGTCAGTTTGTTAAGATTCAGTTTTCAAGGAACAATTG  200

seq1  TCCATTGTCCTGTCACTTCTTAGTTTTTCTCATGGTCTCCGTTAGCTCTG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGTCCTGTCACTTCTTAGTTTTTCTCATGGTCTCCGTTAGCTCTG  250

seq1  AACAGACTGAAGATATTAAGCTTAGGATTATAGAGACCCTATTTATATGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTGAAGATATTAAGCTTAGGATTATAGAGACCCTATTTATATGG  300

seq1  CTTTTGGAATTTCTTTCCATAGATAAATGGTTGTTGAGGTAACACAGAGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGAATTTCTTTCCATAGATAAATGGTTGTTGAGGTAACACAGAGA  350

seq1  TTTCCTTTAGTGACCAGAAAAG-AAACCACGAAACAATTCTTTTGTATAT  391
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTCCTTTAGTGACCAGAAAAGAAAACCACGAAACAATTCTTTTGTATAT  400

seq1  TCCACTGACAGAATCCAGGGCACTTAATTGCCTGCTGTTCATGCTTCCTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGACAGAATCCAGGGCACTTAATTGCCTGCTGTTCATGCTTCCTT  450

seq1  GTGTGTGTATCTCACTAGAGATGTCCTGTATACAGTTCAAAAATATTTGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTATCTCACTAGAGATGTCCTGTATACAGTTCAAAAATATTTGG  500

seq1  TATTTCCAGTTTCCCCACCGTGATCCCCAAGTTAGGGAGCGTAGTGGTGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAGTTTCCCCACCGTGATCCCCAAGTTAGGGAGCGTAGTGGTGT  550

seq1  GGTAGTGTGAGGATGCAAGGGTTTGGGGAGAAGGGATGGAGTTATTTAGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGTGAGGATGCAAGGGTTTGGGGAGAAGGGATGGAGTTATTTAGG  600

seq1  TCAGGACACTGGAGCTGCCTCACTTAACTTTCAATACTTACACTGTGCAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACACTGGAGCTGCCTCACTTAACTTTCAATACTTACACTGTGCAA  650

seq1  AGACACGGTCCTGCTAGTTTGTGTGTGCTCCGATTGCATATGTCCTGTCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACGGTCCTGCTAGTTTGTGTGTGCTCCGATTGCATATGTCCTGTCT  700

seq1  ATAAGGAACTCATGGCTTGTGGGTGTCTGCGGCTCTGGATTGTGGAGGGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAACTCATGGCTTGTGGGTGTCTGCGGCTCTGGATTGTGGAGGGG  750

seq1  GCTCTGATTCCAACTCTCCCTTAGAGTTCCGACTGGTCAATGGCAGCAGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGATTCCAACTCTCCCTTAGAGTTCCGACTGGTCAATGGCAGCAGC  800

seq1  CGCTGTGAGGGCCGCGTGGAGCTTTTGGTACAGGATGCCTGGCAACCCCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGTGAGGGCCGCGTGGAGCTTTTGGTACAGGATGCCTGGCAACCCCT  850

seq1  CTGTGCTGCCAACTGGGACTTAGCAGATGCCACTGTGCTCTGCCACCAGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTGCCAACTGGGACTTAGCAGATGCCACTGTGCTCTGCCACCAGC  900

seq1  TCAACTGTGGCTATGCAGTGGCCACACCGCAAGGAGGCCACTTTGGAAAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGTGGCTATGCAGTGGCCACACCGCAAGGAGGCCACTTTGGAAAT  950

seq1  GTGGAAGGTCCCATCAGGACAGATGTGTTTCACTGTGTGGGAACAGAGCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGTCCCATCAGGACAGATGTGTTTCACTGTGTGGGAACAGAGCC  1000

seq1  CCACTTACTGAGCTGCCCAACAAGCACCTTAGGGGCCCAGGCATGCGCAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTACTGAGCTGCCCAACAAGCACCTTAGGGGCCCAGGCATGCGCAC  1050

seq1  TGGGGAATTC  1051
      ||||||||||
seq2  TGGGGAATTC  1060