BAC Information

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BAC

Clone NameB6Ng01-186C13
Chromosome7 (Build37)
Map Location 8,732,617 - 8,898,634
singlet/doubletdoublet
Overlap geneLOC100041989, LOC100041998, LOC100042009
Upstream geneEG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983
Downstream geneLOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186C13.bB6Ng01-186C13.g
ACCGA011077GA011078
length1,2321,096
definitionB6Ng01-186C13.b B6Ng01-186C13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,897,415 - 8,898,634)(8,732,617 - 8,733,706)
sequence
gaattcagaagaagttgtttgataaccaaggatattaatacaataggatt
taatgtgctctgtgtgagtcctggaaagagtagtcaattccttaaggaca
ctcaatgttgttatccattaagctatatgttcaggatgttacacaaaatg
ttaaactgttacacaaaatattaaactgaataatgaactgaaatgttatt
aaaatttaaataaaagggttgtttatattatttgatagaagggagtgata
aaagtaagcatatatcaacactgttttgaattgactttagatattaggtg
tcagaaagtcaggcgcatgttgtttacaatcacatagtggattagtatca
acataagaataatgtcctgtgatacacacattggacttaaaaaggaagga
ataattcgtggacacctgggccttcttagtaatatttgcctacaaatgag
gatgatggacaatcaagaaccagaaaacagagtgctacatgtgtatgaaa
ttgctataatgaatcccaatacactgtaatatacagaggaatgacatcgt
aatcatgatgaacaattttaattctgtattccacatacaacatagagcac
tagaaacctcaaatgcaatctttaaagaggagtttttctagttttctgtg
aaatattcctctggttttgtactatatatgtactaataagaaaaagtata
gtgcatgacagagtcagtgatcataactatgctatattttcatttttcaa
tgatcaacaagagtcagagattaaagccaatcatgtgtgtcatatcacat
gctaaataacatctattagccttcacaccatggaattggcctgtatttac
ctcaaactatgtaggccataacatctaagtaggttcctatgtctacactc
atcagtatagtttttcactgtaaaggaatattttaaaatgaacattagag
actaaccacagaacattctgtccagatatgatggaaagggatgggaaaga
cttcacttctttctctactacaccatgactcccaggctatgcaagtgaac
aactgctgcagtcttttcatggacagggtgaccaggatacaacctccttc
tgggaaacaagaattcttctaactccttaacagtcctccctttcttcttt
tcctttatttggcagttatctccatgtcccacttgaaacacaaactagta
ataacaaaagcaatctgatgaagtctagagaa
gaattcactctggaaagaagcatttcaggtgaagtgagtgttgcaaaacc
ttcaaggacaactgcttccttgttgctcatcagcgagttcacacaggaga
gacacttttacatgtactaaacgtggcaagtcatacattaacagatccag
tatttcgactgcacatatatatgaatgctaagtgcataactagtgcctat
gagagacccccctccaaatgcattggattcctggaacaggagatacatat
gggtatgaagcagtctgtttcctggaaatggaaccctggtcctctaccat
agcagaatatggacttacacgctgaaccctctctaaaatccatgttttac
atttttaagaagttactagattttgttctaaaaggctgtgtgtttcagtt
ttcctcctgttgcacaccagataccagtttgtcacatcctgacattttcc
aagtcgtgaggtattcactttaacaattttagtaactatggtggctcagg
catgatggtgcaggctttaatcccagcactcaggaggcagaggcagctgt
agtcagtgagttcaaggtcgtcatggtctaggagttccagatccttgtat
acctttaagtgaatgctgggaattgaaccaaagttatctgcaataagagt
aagtgctgttatccagtgagccattttcctgaccctgtatctatgtttcc
ttttttgtttatatacagtcttaccatgttggtttggctagcttgtttct
ctctgtatcacaagttgtcctagaactcatagacctaccatattctgggt
tctgagtgctggtattaaagacacacccctctgggagatcaaaagaaact
ggtgctttcctgtcttagccattgccctgagtagatttcgggtgctaggt
ctgcacccaaccacacaacacccagaaggatgctggatacccaggtgttt
ctaatacacccatgatcataggatcacaggtttctttgggagtttgatca
tgccaggattcaggatccctagagggcatcttgactctcctaggcactct
tacatgcagaatttcagatccatgaatcacagagacagctggactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8897415_8898634
seq2: B6Ng01-186C13.b_42_1273 (reverse)

seq1  TTCTCT-GATTTCATCAGAATTGGCCTTTTGTTTATTTAACTAGT---TG  46
      |||||| || |||||||| ||||  |||||| |||||  ||||||   ||
seq2  TTCTCTAGACTTCATCAG-ATTG--CTTTTG-TTATT--ACTAGTTTGTG  44

seq1  TGTCAAGTGG--CATTGAG-TAACTGC--AATAAAGGAAA--GAGAAAGG  89
      | ||||||||  ||| ||| |||||||  |||||||||||   |||||||
seq2  TTTCAAGTGGGACATGGAGATAACTGCCAAATAAAGGAAAAGAAGAAAGG  94

seq1  GA-GACTGGTTAGGAG-TAGAAGAATTCTGGTTT-CCAG-AGGAGGTTGT  135
      || ||||| | ||||| |||||||||||| |||| |||| ||||||||||
seq2  GAGGACTGTTAAGGAGTTAGAAGAATTCTTGTTTCCCAGAAGGAGGTTGT  144

seq1  ATCCTGGTCA-CCTGT-CATG-AAAGACTGCAGCAGTTGTTCACTTGCAT  182
      |||||||||| ||||| |||| ||||||||||||||||||||||||||||
seq2  ATCCTGGTCACCCTGTCCATGAAAAGACTGCAGCAGTTGTTCACTTGCAT  194

seq1  AGCCTGGGAGTCATGGTGTAGTAGAGAAAGAAGTGAAGTCTTT-CCATCC  231
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCCTGGGAGTCATGGTGTAGTAGAGAAAGAAGTGAAGTCTTTCCCATCC  244

seq1  CTTTCCATCATATCTTGGACAGAATGTTCTGTGGTTAGTCTCTAATGTTC  281
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTTCCATCATATC-TGGACAGAATGTTCTGTGGTTAGTCTCTAATGTTC  293

seq1  ATTTTAAAATATTCCTTTACAGTGAAAAACTATACTGATGAGTGTAGACA  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATATTCCTTTACAGTGAAAAACTATACTGATGAGTGTAGACA  343

seq1  TAGGAACTTACTTAGATGTTATGGCCTACATAGTTTGAGGTAAATACAGG  381
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACCTACTTAGATGTTATGGCCTACATAGTTTGAGGTAAATACAGG  393

seq1  CCAATTCCATGGTGTGAAGGCTAATAGATGTTATTTAGCATGTGATATGA  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCCATGGTGTGAAGGCTAATAGATGTTATTTAGCATGTGATATGA  443

seq1  CACACATGATTGGCTTTAATCTCTGACTCTTGTTGATCATTGAAAAATGA  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGATTGGCTTTAATCTCTGACTCTTGTTGATCATTGAAAAATGA  493

seq1  AAATATAGCATAGTTATGATCACTGACTCTGTCATGCACTATACTTTTTC  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGCATAGTTATGATCACTGACTCTGTCATGCACTATACTTTTTC  543

seq1  TTATTAGTACATATATAGTACAAAACCAGAGGAATATTTCACAGAAAACT  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTACATATATAGTACAAAACCAGAGGAATATTTCACAGAAAACT  593

seq1  AGAAAAACTCCTCTTTAAAGATTGCATTTGAGGTTTCTAGTGCTCTATGT  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACTCCTCTTTAAAGATTGCATTTGAGGTTTCTAGTGCTCTATGT  643

seq1  TGTATGTGGAATACAGAATTAAAATTGTTCATCATGATTACGATGTCATT  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGGAATACAGAATTAAAATTGTTCATCATGATTACGATGTCATT  693

seq1  CCTCTGTATATTACAGTGTATTGGGATTCATTATAGCAATTTCATACACA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTATATTACAGTGTATTGGGATTCATTATAGCAATTTCATACACA  743

seq1  TGTAGCACTCTGTTTTCTGGTTCTTGATTGTCCATCATCCTCATTTGTAG  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCACTCTGTTTTCTGGTTCTTGATTGTCCATCATCCTCATTTGTAG  793

seq1  GCAAATATTACTAAGAAGGCCCAGGTGTCCACGAATTATTCCTTCCTTTT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATTACTAAGAAGGCCCAGGTGTCCACGAATTATTCCTTCCTTTT  843

seq1  TAAGTCCAATGTGTGTATCACAGGACATTATTCTTATGTTGATACTAATC  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCCAATGTGTGTATCACAGGACATTATTCTTATGTTGATACTAATC  893

seq1  CACTATGTGATTGTAAACAACATGCGCCTGACTTTCTGACACCTAATATC  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGTGATTGTAAACAACATGCGCCTGACTTTCTGACACCTAATATC  943

seq1  TAAAGTCAATTCAAAACAGTGTTGATATATGCTTACTTTTATCACTCCCT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCAATTCAAAACAGTGTTGATATATGCTTACTTTTATCACTCCCT  993

seq1  TCTATCAAATAATATAAACAACACTTTTATTTAAATTTTAATAACATTTC  1031
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTATCAAATAATATAAACAACCCTTTTATTTAAATTTTAATAACATTTC  1043

seq1  AGTTCATTATTCAGTTTAATATTTTGTGTAACAGTTTAACATTTTGTGTA  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATTATTCAGTTTAATATTTTGTGTAACAGTTTAACATTTTGTGTA  1093

seq1  ACATCCTGAACATATAGCTTAATGGATAACAACATTGAGTGTCCTTAAGG  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTGAACATATAGCTTAATGGATAACAACATTGAGTGTCCTTAAGG  1143

seq1  AATTGACTACTCTTTCCAGGACTCACACAGAGCACATTAAATCCTATTGT  1181
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACTACTCTTTCCAGGACTCACACAGAGCACATTAAATCCTATTGT  1193

seq1  ATTAATATCCTTGGTTATCAAACAACTTCTTCTGAATTC  1220
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATCCTTGGTTATCAAACAACTTCTTCTGAATTC  1232

seq1: chr7_8732617_8733706
seq2: B6Ng01-186C13.g_64_1159

seq1  GAATTCACTCTGGAAAGAAGCATTTCAGGTGAAGTGAGTGTTGCAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGGAAAGAAGCATTTCAGGTGAAGTGAGTGTTGCAAAACC  50

seq1  TTCAAGGACAACTGCTTCCTTGTTGCTCATCAGCGATTTCACACAGGAGA  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCAAGGACAACTGCTTCCTTGTTGCTCATCAGCGAGTTCACACAGGAGA  100

seq1  GACACTTTTACATGTACTAAACGTGGCAAGTCATACATTAACAGATCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTTTACATGTACTAAACGTGGCAAGTCATACATTAACAGATCCAG  150

seq1  TATTTCGACTGCACATATATATGAATGCTAAGTGCATAACTAGTGCCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGACTGCACATATATATGAATGCTAAGTGCATAACTAGTGCCTAT  200

seq1  GAGAGACCCCCCTCCAAATGCATTGGATTCCTGGAACAGGAGATACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACCCCCCTCCAAATGCATTGGATTCCTGGAACAGGAGATACATAT  250

seq1  GGGTATGAAGCAGTCTGTTTCCTGGAAATGGAACCCTGGTCCTCTACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGAAGCAGTCTGTTTCCTGGAAATGGAACCCTGGTCCTCTACCAT  300

seq1  AGCAGAATATGGACTTACACGCTGAACCCTCTCTAAAATCCATGTTTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAATATGGACTTACACGCTGAACCCTCTCTAAAATCCATGTTTTAC  350

seq1  ATTTTTAAGAAGTTACTAGATTTTGTTCTAAAAGGCTGTGTGTTTCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAGAAGTTACTAGATTTTGTTCTAAAAGGCTGTGTGTTTCAGTT  400

seq1  TTCCTCCTGTTGCACACCAGATACCAGTTTGTCACATCCTGACATTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTGTTGCACACCAGATACCAGTTTGTCACATCCTGACATTTTCC  450

seq1  AAGTCGTGAGGTATTCACTTTAACAATTTTAGTAACTATGGTGGCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGTGAGGTATTCACTTTAACAATTTTAGTAACTATGGTGGCTCAGG  500

seq1  CATGATGGTGCAGGCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGGTGCAGGCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGCTGT  550

seq1  AGTCAGTGAGTTCAAGGTCGTCATGGTCTAGGAGTTCCAGATCCTTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGAGTTCAAGGTCGTCATGGTCTAGGAGTTCCAGATCCTTGTAT  600

seq1  ACCTTTAAGTGAATGCTGGGAATTGAACCAAAGTTATCTGCAATAAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAAGTGAATGCTGGGAATTGAACCAAAGTTATCTGCAATAAGAGT  650

seq1  AAGTGCTGTTATCCAGTGAGCCATTTTCCTGACCCTGTATCTATGTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGTTATCCAGTGAGCCATTTTCCTGACCCTGTATCTATGTTTCC  700

seq1  TTTTTTGTTTATATACAGTCTTACCATGTTGGTTTGGCTAGCTTGTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTATATACAGTCTTACCATGTTGGTTTGGCTAGCTTGTTTCT  750

seq1  CTCTGTATCACAAGTTGTCCTAGAACTCATAGACCTACCATATTCTGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATCACAAGTTGTCCTAGAACTCATAGACCTACCATATTCTGGGT  800

seq1  TCTGAGTGTTGGTATTAAAGACACACCCCTCTGGGAGATCAAAAGAAACT  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTGCTGGTATTAAAGACACACCCCTCTGGGAGATCAAAAGAAACT  850

seq1  GGTGCTTTCCTGTCTTAGCCATTGCCCTGAGTAGATTTCGGGTGCTAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTTCCTGTCTTAGCCATTGCCCTGAGTAGATTTCGGGTGCTAGGT  900

seq1  CTGCACCCAACCACACAACACCCAG-AGGATGCTGGATACCCAGGTG-TT  948
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  CTGCACCCAACCACACAACACCCAGAAGGATGCTGGATACCCAGGTGTTT  950

seq1  CTAATACACCCATGATCATAGGATCACAGG-TTCTTT-GGAGTTTGATCA  996
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  CTAATACACCCATGATCATAGGATCACAGGTTTCTTTGGGAGTTTGATCA  1000

seq1  TGCCAGGATTTCAGGAT-CCTAGA-GGCACCTTGA--CTCCTAGGCACTC  1042
      |||||||| |||||||| |||||| |||| |||||  |||||||||||||
seq2  TGCCAGGA-TTCAGGATCCCTAGAGGGCATCTTGACTCTCCTAGGCACTC  1049

seq1  TTACATGCAGAATTTCAGGATCAATGGATCACAGAGACAGCTGGACTC  1090
      ||||||||||||||||| |||| ||| |||||||||||||||||||||
seq2  TTACATGCAGAATTTCA-GATCCATGAATCACAGAGACAGCTGGACTC  1096