BAC Information

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BAC

Clone NameB6Ng01-186I01
Chromosome7 (Build37)
Map Location 85,617,829 - 85,759,093
singlet/doubletdoublet
Overlap geneNtrk3
Upstream geneA330068G13Rik
Downstream geneMrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186I01.bB6Ng01-186I01.g
ACCGA011327GA011328
length5141,105
definitionB6Ng01-186I01.b B6Ng01-186I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,758,574 - 85,759,093)(85,617,829 - 85,618,933)
sequence
taggcaagcactgtatccattgagtggcaaaccagccccagcctaggagt
attatttgactcagagctaccagtagggcagtgctgggcttatccttaaa
aacagatcttttttctcctgttcacccacatgtgaaatgagacagactaa
gcactgaactgaagcactatagtgagtaggtgtgtccacaaaattgcccc
aaaggctgggatgcagagatgaagctcaaagacactgcactgtgggaaac
ctacaaccacaaaggtgcaggcgctgctcggactcacagacagacagaca
gtagaacagtggctgctggggctggagggaggaaggaaaggggatcggtg
catgggtgtggagttgcaggtttgtgagctgagaatgctacagttgccta
cagtggagacataaagccaagaaatcctactgtaagattaataccatcag
caaatggagtccctgccctaaataatacccatcattggctaatggcgaat
ttttaggatatcaa
gaattccttggatggatacgccttgactgagggctatcagtgatcacatt
caggactaggagaaggacagtgccagggtcagcccagcctccttcaacac
tgagtgagtgttttaccaagtcgattaaatctgcaaattacaacacacat
aattatcactttgctttaagaaaatgaaatattccaatctattttaatca
tgtctgctccatgtctgtggggtattaagagaagcctgctcaagatgcat
taatggtcctcagagtatttctggagggtttctatgttgagggctgatga
acttctggtgcctcttgccattgcctaagttgtaccatgggatttagaac
ccaaacatcttttcttctgtattcatcctttatctttaaaacaatcttgc
agagtcttgctctgatctaaggacagatagttgcagtttcaggggaaaaa
atagtagccagaaactcctgagcacagtacaatgccaagtcagattccat
cagatctaccactgaaatactgctggctgcaccatagcaaagttcagagg
atattctcagcttgctctgcaagaagggtacttcctgagctggaggaaga
tttagtcagacgcttgccaaaggccctccctccaatctcacaaaagcgag
agtacaagaagggtcttggcacacagcaagaatcctgaaatgatttgatg
atctagggtttgccatcaggggtgcgggtcatcttggctcctgggaggac
aagctggacattcatagtgtgacactgtgtgagggggtgaaagagaatga
gtttcagaaacagtggcttcaggcagtaaccaccctgaaattcataatat
tagtctccagattaccaactcaccagccatatgatcctggtataatgact
tgacttgtctaagccttgaatccctcatttgcaaaacagattaaaataac
tcccatatggggcagcttcaaggatgagccaggatcctgtatttattcat
actcggtgcctttcttctccttttcccaatgaaatgcatactcacctctt
ctcatgaagaggtttcaactctgtcaactccattcatcaactgttacatc
agaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_85758574_85759093
seq2: B6Ng01-186I01.b_42_561 (reverse)

seq1  TCGATATCCTAAAAATTCACCATTAGCCAATGATGGGTCTTATTTAGGGC  50
      | |||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  TTGATATCCTAAAAATTCGCCATTAGCCAATGATGGGTATTATTTAGGGC  50

seq1  AGGGACTCCCTTTGCTGATGGTATTAATCTTACAGTAGGATTTCTTGGCT  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTCCATTTGCTGATGGTATTAATCTTACAGTAGGATTTCTTGGCT  100

seq1  TTATGTCTCCACTGTAGGCAACTGTAGCATTCTCAGCTCACAAACCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTCCACTGTAGGCAACTGTAGCATTCTCAGCTCACAAACCTGCA  150

seq1  ACTCCACACCCATGCACCGATCCCCTTTCCTTCCTCCCTCCAGCCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACACCCATGCACCGATCCCCTTTCCTTCCTCCCTCCAGCCCCAGC  200

seq1  AGCCACTGTTCTACTGTCTGTCTGTCTGTGAGTCCGAGCAGCGCCTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGTTCTACTGTCTGTCTGTCTGTGAGTCCGAGCAGCGCCTGCAC  250

seq1  CTTTGTGGTTGTAGGTTTCCCACAGTGCAGTGTCTTTGAGCTTCATCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGTTGTAGGTTTCCCACAGTGCAGTGTCTTTGAGCTTCATCTCT  300

seq1  GCATCCCAGCCTTTGGGGCAATTTTGTGGACACACCTACTCACTATAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCAGCCTTTGGGGCAATTTTGTGGACACACCTACTCACTATAGTG  350

seq1  CTTCAGTTCAGTGCTTAGTCTGTCTCATTTCACATGTGGGTGAACAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTCAGTGCTTAGTCTGTCTCATTTCACATGTGGGTGAACAGGAG  400

seq1  AAAAAAGATCTGTTTTTAAGGATAAGCCCAGCACTGCCCTACTGGTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGATCTGTTTTTAAGGATAAGCCCAGCACTGCCCTACTGGTAGCT  450

seq1  CTGAGTCAAATAATACTCCTAGGCTGGGGCTGGTTTGCCACTCAATGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAAATAATACTCCTAGGCTGGGGCTGGTTTGCCACTCAATGGAT  500

seq1  ACAGTGCTTGCCTAGAATTC  520
      ||||||||||||||||||||
seq2  ACAGTGCTTGCCTAGAATTC  520

seq1: chr7_85617829_85618933
seq2: B6Ng01-186I01.g_65_1169

seq1  GAATTCCTTGGATGGATACGCCTTGACTGAGGGCTATCAGTGATCACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGATGGATACGCCTTGACTGAGGGCTATCAGTGATCACATT  50

seq1  CAGGACTAGGAGAAGGACAGTGCCAGGGTCAGCCCAGCCTCCTTCAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTAGGAGAAGGACAGTGCCAGGGTCAGCCCAGCCTCCTTCAACAC  100

seq1  TGAGTGAGTGTTTTACCAAGTCGATTAAATCTGCAAATTACAACACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGTGTTTTACCAAGTCGATTAAATCTGCAAATTACAACACACAT  150

seq1  AATTATCACTTTGCTTTAAGAAAATGAAATATTCCAATCTATTTTAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCACTTTGCTTTAAGAAAATGAAATATTCCAATCTATTTTAATCA  200

seq1  TGTCTGCTCCATGTCTGTGGGGTATTAAGAGAAGCCTGCTCAAGATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTCCATGTCTGTGGGGTATTAAGAGAAGCCTGCTCAAGATGCAT  250

seq1  TAATGGTCCTCAGAGTATTTCTGGAGGGTTTCTATGTTGAGGGCTGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTCCTCAGAGTATTTCTGGAGGGTTTCTATGTTGAGGGCTGATGA  300

seq1  ACTTCTGGTGCCTCTTGCCATTGCCTAAGTTGTACCATGGGATTTAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGTGCCTCTTGCCATTGCCTAAGTTGTACCATGGGATTTAGAAC  350

seq1  CCAAACATCTTTTCTTCTGTATTCATCCTTTATCTTTAAAACAATCTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACATCTTTTCTTCTGTATTCATCCTTTATCTTTAAAACAATCTTGC  400

seq1  AGAGTCTTGCTCTGATCTAAGGACAGATAGTTGCAGTTTCAGGGGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTGCTCTGATCTAAGGACAGATAGTTGCAGTTTCAGGGGAAAAA  450

seq1  ATAGTAGCCAGAAACTCCTGAGCACAGTACAATGCCAAGTCAGATTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGCCAGAAACTCCTGAGCACAGTACAATGCCAAGTCAGATTCCAT  500

seq1  CAGATCTACCACTGAAATACTGCTGGCTGCACCATAGCAAAGTTCAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTACCACTGAAATACTGCTGGCTGCACCATAGCAAAGTTCAGAGG  550

seq1  ATATTCTCAGCTTGCTCTGCAAGAAGGGTACTTCCTGAGCTGGAGGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTCAGCTTGCTCTGCAAGAAGGGTACTTCCTGAGCTGGAGGAAGA  600

seq1  TTTAGTCAGACGCTTGCCAAAGGCCCTCCCTCCAATCTCACAAAAGCGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCAGACGCTTGCCAAAGGCCCTCCCTCCAATCTCACAAAAGCGAG  650

seq1  AGTACAAGAAGGGTCTTGGCACACAGCAAGAATCCTGAAATGATTTGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAGAAGGGTCTTGGCACACAGCAAGAATCCTGAAATGATTTGATG  700

seq1  ATCTAGGGTTTGCCATCAGGGGTGCGGGTCATCTTGGCTCCTGGGAGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGGTTTGCCATCAGGGGTGCGGGTCATCTTGGCTCCTGGGAGGAC  750

seq1  AAGCTGGACATTCATAGTGTGACACTGTGTGAGGGGGTGAAAGAGAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGACATTCATAGTGTGACACTGTGTGAGGGGGTGAAAGAGAATGA  800

seq1  GTTTCAGAAACAGTGGCTTCAGGCAGTAACCACCCTGAAATTCATAATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGAAACAGTGGCTTCAGGCAGTAACCACCCTGAAATTCATAATAT  850

seq1  TAGTCTCCAGATTACCAACTCACCAGCCATATGATCCTGGTATAATGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCCAGATTACCAACTCACCAGCCATATGATCCTGGTATAATGACT  900

seq1  TGACTTGTCTAAGCCTTGAATCCCTCATTTGCAAAACAGATTAAAATAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGTCTAAGCCTTGAATCCCTCATTTGCAAAACAGATTAAAATAAC  950

seq1  TCCCATATGGGGCAGCTTCAAGGATGAGCCAGGATCTTGTATTTATTCAT  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TCCCATATGGGGCAGCTTCAAGGATGAGCCAGGATCCTGTATTTATTCA-  999

seq1  TACTCGGTGCCTTTCTTCTCC-TTTCCCAATGAAAATGCATACTCAACCC  1049
      ||||||||||||||||||||| |||||||||| ||||||||||||| | |
seq2  TACTCGGTGCCTTTCTTCTCCTTTTCCCAATG-AAATGCATACTCACCTC  1048

seq1  TTCTCATGAAGA-GTTTCAACTCTGTCAACTACA-TCATCAACTGTTACA  1097
      |||||||||||| |||||||||||||||||| || |||||||||||||||
seq2  TTCTCATGAAGAGGTTTCAACTCTGTCAACTCCATTCATCAACTGTTACA  1098

seq1  TCAAGAAT  1105
      || |||||
seq2  TC-AGAAT  1105