BAC Information

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BAC

Clone NameB6Ng01-186K06
Chromosome7 (Build37)
Map Location 79,698,408 - 79,699,551
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665535, Mctp2, LOC100042873
Downstream geneLOC100042880, LOC233391, LOC665570, LOC100042029, EG384643, LOC625243, 4930429H19Rik, LOC665588, Rgma, Chd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186K06.bB6Ng01-186K06.g
ACCGA011427GA011428
length1,1541,133
definitionB6Ng01-186K06.b B6Ng01-186K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagtccttgagttctttatatatgttggatattagccccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cttgttgacggtgtcttttgccttgcagaaactttggagtttcattaggt
cccatttgtcaattctcgatcttacagcacatgccattgctgttttgttc
aggaatatttcccctgtgcccatatcttcaaggcttttccccactttctc
ctctataagtttcagtgtctctggttttatgtgaagttctttgatccact
tagatttgaccttagtacaaggagataagtatggatcgattcgcattctt
ctacatgataacaaccagttgtgccagcaccaattgttgaaaatgctgtc
tttcttccactggatggttttagctcccttgtcgaagatcaagtgaccat
aggtgtgtgggttcatttctgggtcttcaattctattccattggtctact
tgtctgtttctataccagtaccatgcagtttttatcacaattgctctgta
gtaaagctttaggtcaggcatggtgattccaccagaggttcttttatcct
tgagaagactttttgctatcctaggttttttgttattccagatgaatttg
caaattgctccttctaattcgttgaagaattgagttggaattttgatggg
gattgcattgaatctgtagattgcttttggcaagatagccatttttacaa
tgttgatcctgccaatccatgagcatgggagatctttccatcttctgaga
tcttctttaatttctttcttcagaaatttgaagtttttatcatacagata
tttcacctccttagttagagttacgccaagatatttttattactatttgt
gactattgagaaggtgtttgtttccctaatttctttcctcagctgtttat
tctttgtatagagaaaggccattggacttgtttgagtttattttatatcc
agctacgtttaccgaagctgctatcaggttaggagatctctggcagaatc
ttaaggcacttagatattactcatgcagtacagtctggctaatggtggaa
tagt

gaattcccaggaccacactttctgcaaggctgagatttcttatacaggat
gagcaatttacaactacttgttaaggtaaaagtgagattgaaaatgtagc
ttatagtttaaagtgagtttctatttatgtattctgtattcaacagtaaa
gataaacttattatggttttaaaatatgcatacaatgcatatgagtgtta
aaacaatgtgaaaatcaagacagcaccaattaacaaggatggcacagatg
tccaattaggagcataatttgggaatataaatatacttctggagggcaag
ttaacagtacacacacacacacacgtaaacacatagtttttgacctgtca
cataatacaatttgtcctaaggaaataactatggaattgctcgagacttt
ctttaacaccatttagattaaaatagaaactaatcaagaagaagagctct
atggggttagtgcgaacactgtcttacacctgcttcaatgaactaaacat
ccatttgaagcaaaatgatttggaaaaaaattaatgccataaaaagcaaa
acagaaggcaaacattcatattttaagggggaaaaactgaagcaatgagt
gagtgtatgtgtgtgtgtgtatacacatgtgtacaagcatgtgcagcccc
ccacactacatatttacatatctgtgtagacataaacatacagtgacttt
attatgctgaattccaggcaatacatataagtattcttaaagggttgttt
tatgtttattattttattttgaaagaagtctgcaataaattttgcaacta
ttttctccatttttactcagtgttaaatgtagaggacctggaagaacttg
taataactctccacaaatattcttgctaattttcaatgctaagttttaat
gataatgtttaatgctaattgtccacatttcactatatctagagtatctt
gtgagttcccataaatgactagtggtgactagaacatgtacgggacttgg
ccagaggaccctgcatagttgtgtgtactggctagtttgtgtcacttgac
aacctggagtatcacagagaagaagcttcagtgaagcaattgctcaatga
agatcaactgtaggcattttctcaatatgatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_79698408_79699551
seq2: B6Ng01-186K06.g_62_1194

seq1  GAATTCCCAGGACCACACTTTCTGCAAGGCTGAGATTTCTTATACAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGACCACACTTTCTGCAAGGCTGAGATTTCTTATACAGGAT  50

seq1  GAGCAATTTACAACTACTTGTTAAGGTAAAAGTGAGATTGAAAATGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTTACAACTACTTGTTAAGGTAAAAGTGAGATTGAAAATGTAGC  100

seq1  TTATAGTTTAAAGTGAGTTTCTATTTATGTATTCTGTATTCAACAGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTTTAAAGTGAGTTTCTATTTATGTATTCTGTATTCAACAGTAAA  150

seq1  GATAAACTTATTATGGTTTTAAAATATGCATACAATGCATATGAGTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACTTATTATGGTTTTAAAATATGCATACAATGCATATGAGTGTTA  200

seq1  AAACAATGTGAAAATCAAGACAGCACCAATTAACAAGGATGGCACAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGTGAAAATCAAGACAGCACCAATTAACAAGGATGGCACAGATG  250

seq1  TCCAATTAGGAGCATAATTTGGGAATATAAATATACTTCTGGAGGGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTAGGAGCATAATTTGGGAATATAAATATACTTCTGGAGGGCAAG  300

seq1  TTAACAGTACACACACACACACACGTAAACACATAGTTTTTGACCTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTACACACACACACACACGTAAACACATAGTTTTTGACCTGTCA  350

seq1  CATAATACAATTTGTCCTAAGGAAATAACTATGGAATTGCTCGAGACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATACAATTTGTCCTAAGGAAATAACTATGGAATTGCTCGAGACTTT  400

seq1  CTTTAACACCATTTAGATTAAAATAGAAACTAATCAAGAAGAAGAGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACACCATTTAGATTAAAATAGAAACTAATCAAGAAGAAGAGCTCT  450

seq1  ATGGGGTTAGTGCGAACACTGTCTTACACCTGCTTCAATGAACTAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTTAGTGCGAACACTGTCTTACACCTGCTTCAATGAACTAAACAT  500

seq1  CCATTTGAAGCAAAATGATTTGGAAAAAAATTAATGCCATAAAAAGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGAAGCAAAATGATTTGGAAAAAAATTAATGCCATAAAAAGCAAA  550

seq1  ACAGAAGGCAAACATTCATATTTTAAGGGGGAAAAACTGAAGCAATGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGCAAACATTCATATTTTAAGGGGGAAAAACTGAAGCAATGAGT  600

seq1  GAGTGTATGTGTGTGTGTGTATACACATGTGTACAAGCATGTGCAGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTATGTGTGTGTGTGTATACACATGTGTACAAGCATGTGCAGCCCC  650

seq1  CCACACTACATATTTACATATCTGTGTAGACATAAACATACAGTGACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTACATATTTACATATCTGTGTAGACATAAACATACAGTGACTTT  700

seq1  ATTATGCTGAATTCCAGGCAATACATATAAGTATTCTTAAAGGGTTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCTGAATTCCAGGCAATACATATAAGTATTCTTAAAGGGTTGTTT  750

seq1  TATGTTTATTATTTTATTTTGAAAGAAGTCTGCAATAAATTTTGCAACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTATTATTTTATTTTGAAAGAAGTCTGCAATAAATTTTGCAACTA  800

seq1  TTTTCTCCATTTTTACTCAGTGTTAAATGTAGAGGACCTGGAAGAACTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCATTTTTACTCAGTGTTAAATGTAGAGGACCTGGAAGAACTTG  850

seq1  TAATAACTCTCCACAAATATTCTTGCTAATTTTCAATGCTAAGTTTTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTCTCCACAAATATTCTTGCTAATTTTCAATGCTAAGTTTTAAT  900

seq1  GATAATGTTTAATGCTAATTGTCCACATTTCACTATATCTAGAGTATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGTTTAATGCTAATTGTCCACATTTCACTATATCTAGAGTATCTT  950

seq1  GTGAGTTCCCATAAATGAACTAGTGGTGACTAAGAACATGTACGGGACTT  1000
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  GTGAGTTCCCATAAATG-ACTAGTGGTGACT-AGAACATGTACGGGACTT  998

seq1  -GCCAGAGGACCCTGCAATAAGTGTGTGTACTGGCTAGTTTTGTGTCAAC  1049
       ||||||||||||||| |||  |||||||||||||||| |||||||| ||
seq2  GGCCAGAGGACCCTGC-ATAGTTGTGTGTACTGGCTAG-TTTGTGTC-AC  1045

seq1  TTGACACACCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATG  1099
      |||||| |||||||| |||||||||| ||| |||||||| ||| | ||| 
seq2  TTGACA-ACCTGGAG-TATCACAGAG-AAGAAGCTTCAG-TGAAGCAATT  1091

seq1  CCTCCATG-AGATACAACTGTAAGGCATTTTCTCAATTAGTGATCA  1144
       ||| ||| |||| ||||||| |||||||||||||||   ||||||
seq2  GCTCAATGAAGAT-CAACTGT-AGGCATTTTCTCAAT--ATGATCA  1133


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