BAC Information

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BAC

Clone NameB6Ng01-186N22
Chromosome7 (Build37)
Map Location 38,235,891 - 38,392,592
singlet/doubletdoublet
Overlap geneZfp536
Upstream geneTshz3, LOC100043874
Downstream geneLOC100043453, EG627844, C80913, Ccne1, 1600014C10Rik, Plekhf1, Pop4, LOC668519, LOC100043464, 1700010N08Rik, EG627975, EG625594, EG627983, EG434171, LOC100043467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186N22.bB6Ng01-186N22.g
ACCGA011602GA011603
length213881
definitionB6Ng01-186N22.b B6Ng01-186N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,235,891 - 38,236,103)(38,391,724 - 38,392,592)
sequence
gaattccaggctgggtgaagcccgtgtcaccatttccatgataaatcctg
ttttctaagggcttataactcagctgtaaatatgtaattcaggctaaggc
ttggcgtgcaaggcctcagccaggacgaaaattttcacaactaccacaga
tccacccccatgtaacttccttaaagcttttgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgt
gaattccccatttcgtttcccattgctcttcctataattaatatttcttg
ttttgcctggaaatcacctgtgagaggtctcttccctagtcccaggccaa
tttggcttcccaagaccaggcagtttcatgccttaccctggctgggacat
ggacagtctcgtgttagcattgtgcacatttggtttcatctaaggtcagc
tgctccttagttctgtgagtattaaagtaaaggcagtctgggcaagaagt
tcaaggcctgctgcatagctgagagcatatctgttgttacaccaacatgc
actgtgtggctctgtaccaaaccagactccaaaccaggctccagtcctgg
ggcaaaccttccatgaatcctcattgcagatgattttcctgtcatccata
gtacaaaataaattaaaaacgattaaaaagaagcagccacgaaaaacaca
gttttgactctagaatcatctagaaaacagagtatcaccttgaatactat
aaaaaagaattaaagaagtgagagctatttctgtttgcaccacctacagt
aaaacatccatgcatttgattgggctcgtgggttgtgaagattaaaacct
gtcctgggactggagagattcctcggtggctttgttgtttttaatgcatc
caagtgtttacctgcatgtcagtatgtgttggatcctctgaagctggagt
tttagatggttgtgatctgttacgtggtgctgggaaattgaaccctggtc
cacagcgagagtggccagtgttcttacctgctgagccattgacacaagtc
atacacgttatttttaaagagaactgggctgcttttgtagagaacccagg
ttcaatttcaagcacggacagggagtgctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_38235891_38236103
seq2: B6Ng01-186N22.b_43_255

seq1  GAATTCCAGGCTGGGTGAAGCCCGTGTCACCATTTCCATGATAAATCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTGGGTGAAGCCCGTGTCACCATTTCCATGATAAATCCTG  50

seq1  TTTTCTAAGGGCTTATAACTCAGCTGTAAATATGTAATTCAGGCTAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAGGGCTTATAACTCAGCTGTAAATATGTAATTCAGGCTAAGGC  100

seq1  TTGGCGTGCAAGGCCTCAGCCAGGACGAAAATTTTCACAACTACCACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCGTGCAAGGCCTCAGCCAGGACGAAAATTTTCACAACTACCACAGA  150

seq1  TCCACCCCCATGTAACTTCCTTAAAGCTTTTGTGTGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCCCATGTAACTTCCTTAAAGCTTTTGTGTGTGTGTGTGTGTGTG  200

seq1  TGTGTGTGTGTGT  213
      |||||||||||||
seq2  TGTGTGTGTGTGT  213

seq1: chr7_38391724_38392592
seq2: B6Ng01-186N22.g_66_937 (reverse)

seq1  CCTGTCCGTGCTGGAAATTGAACCTGGGTTCTCTACAAAAGCAG-CCAGT  49
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  CCTGTCCGTGCTTGAAATTGAACCTGGGTTCTCTACAAAAGCAGCCCAGT  50

seq1  TCTCTTTAAAAATAACGTGTATGGC-TGTGTCAATGGCTCAGCAGGTAAG  98
      ||||||||||||||||||||||| | ||||||||||||||||||||||||
seq2  TCTCTTTAAAAATAACGTGTATGACTTGTGTCAATGGCTCAGCAGGTAAG  100

seq1  AACACTGGCCACTCTCGCTGTGGACCAGGGTTCAA-TTCCCAGCACCACG  147
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AACACTGGCCACTCTCGCTGTGGACCAGGGTTCAATTTCCCAGCACCACG  150

seq1  TAACAGATCACAACCATCTAAAACTCCAGCTTCAGAGGATCCAACACATA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATCACAACCATCTAAAACTCCAGCTTCAGAGGATCCAACACATA  200

seq1  CTGACATGCAGGTAAACACTTGGATGCATTAAAAACAACAAAGCCACCGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATGCAGGTAAACACTTGGATGCATTAAAAACAACAAAGCCACCGA  250

seq1  GGAATCTCTCCAGTCCCAGGACAGGTTTTAATCTTCACAACCCACGAGCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCTCCAGTCCCAGGACAGGTTTTAATCTTCACAACCCACGAGCC  300

seq1  CAATCAAATGCATGGATGTTTTACTGTAGGTGGTGCAAACAGAAATAGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAATGCATGGATGTTTTACTGTAGGTGGTGCAAACAGAAATAGCT  350

seq1  CTCACTTCTTTAATTCTTTTTTATAGTATTCAAGGTGATACTCTGTTTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCTTTAATTCTTTTTTATAGTATTCAAGGTGATACTCTGTTTTC  400

seq1  TAGATGATTCTAGAGTCAAAACTGTGTTTTTCGTGGCTGCTTCTTTTTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATTCTAGAGTCAAAACTGTGTTTTTCGTGGCTGCTTCTTTTTAA  450

seq1  TCGTTTTTAATTTATTTTGTACTATGGATGACAGGAAAATCATCTGCAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTTAATTTATTTTGTACTATGGATGACAGGAAAATCATCTGCAAT  500

seq1  GAGGATTCATGGAAGGTTTGCCCCAGGACTGGAGCCTGGTTTGGAGTCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTCATGGAAGGTTTGCCCCAGGACTGGAGCCTGGTTTGGAGTCTG  550

seq1  GTTTGGTACAGAGCCACACAGTGCATGTTGGTGTAACAACAGATATGCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTACAGAGCCACACAGTGCATGTTGGTGTAACAACAGATATGCTC  600

seq1  TCAGCTATGCAGCAGGCCTTGAACTTCTTGCCCAGACTGCCTTTACTTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATGCAGCAGGCCTTGAACTTCTTGCCCAGACTGCCTTTACTTTA  650

seq1  ATACTCACAGAACTAAGGAGCAGCTGACCTTAGATGAAACCAAATGTGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCACAGAACTAAGGAGCAGCTGACCTTAGATGAAACCAAATGTGCA  700

seq1  CAATGCTAACACGAGACTGTCCATGTCCCAGCCAGGGTAAGGCATGAAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTAACACGAGACTGTCCATGTCCCAGCCAGGGTAAGGCATGAAAC  750

seq1  TGCCTGGTCTTGGGAAGCCAAATTGGCCTGGGACTAGGGAAGAGACCTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTCTTGGGAAGCCAAATTGGCCTGGGACTAGGGAAGAGACCTCT  800

seq1  CACAGGTGATTTCCAGGCAAAACAAGAAATATTAATTATAGGAAGAGCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGATTTCCAGGCAAAACAAGAAATATTAATTATAGGAAGAGCAA  850

seq1  TGGGAAACGAAATGGGGAATTC  869
      ||||||||||||||||||||||
seq2  TGGGAAACGAAATGGGGAATTC  872