BAC Information

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BAC

Clone NameB6Ng01-187N24
Chromosome7 (Build37)
Map Location 152,091,926 - 152,093,003
singlet/doubletsinglet
Overlap genenone
Upstream geneShank2, Cttn, Ppfia1, Fadd, Tmem16a, LOC669079, LOC677315, Fgf3, Fgf4, Fgf15
Downstream geneOraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187N24.bB6Ng01-187N24.g
ACCGA012330GA012331
length1,0821,052
definitionB6Ng01-187N24.b B6Ng01-187N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgtgacctggagaaaaaggagaggggttaaagcatttgtccag
gtcatgaagactggatctcagtaccactgtcactgggtaagtgtggcgcc
tgcctgtatctccagcctctgaaggcatagacagaggctccccagaacaa
gctggctagagaggctgtgcatattggtgagctctgggtgtaagtgagac
actgcctcaaagaattaagtggaagactgttggaggttcctgacaccagc
ctcaggtcttcatatccacatgcacacacacacacacacacacttaaata
taaaaattccttcaattccagcactcaggaggcagaggtgggcggagata
agtttgaagttagcctgttctgatctatatagagactgtcaaaaaaaaaa
aaatcctggtgtggtggcatatggcttcaattccagtaccagggatgcag
atagagaggcaggaggatgtctgtgacttcgaggcttgtctggtcaactc
agtgagtttcaggatagctaggactacatagtgaaaccctgactcagaaa
acaaaaacaaacaaaccaaaaattaaagagataactaagatgacccaggg
tttctgcataggtctgtgaggacacaggcttcagtggccaggcctgccca
ccttgacctcaagggctgacactgccacctgacctaccccttcataagat
tttgttctggcagtcctagcagacattaataagcatgtatactcatccgt
cctctcatttacccggttcaggaaggtggaggcctagagtggccaagggg
tttgtgtgcctcctgtggtatggtgtcacatctggaggctgggtgaggag
gtgggcagcgcaccctgcagtgaccagcatggggccagtctggacatctt
gggtatactggacatgccctgagctgaggggatcccagtgtgtctgctgg
ctgagtgtcagctgtggcgggaaaggaatctcaggtgtgtcttgaatgat
atcagccaaatcccttccgtagttgtagaggtaaaggcttcggactcttt
cacgaccttaatagttcgtggctagtgcagaa
gaattccttgttatgtaaatgagacacccccatcacctgatgtataccaa
tgatgtacatctacccatagcccttaccctctcaaagatttaaatggttt
ttgttactctacaccccacttcccaattaaatgaactgcttaatgaaggc
tgcctccctctcagaccaccagtctgatcgtggtgttccatacatatatg
tctgtgcatcatgtgtgggactggtacctgtgaaggtcgggagaggttgt
tgaatccccacagaactagagttgcaaatagctatgaactaccacgtgga
tgctgggaaccaaacactggtaagttctctgcaaaaacagatgctcttaa
cctctgagccatctcttcatcacccccctttttttgagtcatgtctttca
ttgaacccagaatacccttcttgagtattctctggtctgaaatggttgta
agttcaattgccgtaaagatccctgaagtttccttttacagggagctgtg
gttgtagttctcacctttacatctatggtccacctagagtgggcttctgt
aagtggttcaaggtaaggacccggcttcatcctttttgggggattactca
gcttcatcagcaccatttgtggagaagatgattctttccctaaatgaaca
atctcagaacccttatcaacaacatgaggaggctggtgccatgctgcttt
gatgatggtagctttgcagtaagttttaaagttgagtgtgtcaatttctc
atctttttttctctttctgggttgtctagctatttggggtcccttgggat
tcatgcatttagagattggtttttacatttctctggaaaaggtctttaga
cttttgatagaaaatgtgttttatctgttgattgtttaggttatcactct
agtaagaacatggcatgtctttccatgtatttgggtctaatcattttgtt
aagagtttttgtagtttctacataccagcctttcatttcctggtagtgtg
tcccaaagcatgtaatccttcttccgtccttccttcatccatatcaatac
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_152091926_152093003
seq2: B6Ng01-187N24.b_46_1127

seq1  GAATTCACGTGACCTGGAGAAAAAGGAGAGGGGTTAAAGCATTTGTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTGACCTGGAGAAAAAGGAGAGGGGTTAAAGCATTTGTCCAG  50

seq1  GTCATGAAGACTGGATCTCAGTACCACTGTCACTGGGTAAGTGTGGCGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAAGACTGGATCTCAGTACCACTGTCACTGGGTAAGTGTGGCGCC  100

seq1  TGCCTGTATCTCCAGCCTCTGAAGGCATAGACAGAGGCTCCCCAGAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTATCTCCAGCCTCTGAAGGCATAGACAGAGGCTCCCCAGAACAA  150

seq1  GCTGGCTAGAGAGGCTGTGCATATTGGTGAGCTCTGGGTGTAAGTGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTAGAGAGGCTGTGCATATTGGTGAGCTCTGGGTGTAAGTGAGAC  200

seq1  ACTGCCTCAAAGAATTAAGTGGAAGACTGTTGGAGGTTCCTGACACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTCAAAGAATTAAGTGGAAGACTGTTGGAGGTTCCTGACACCAGC  250

seq1  CTCAGGTCTTCATATCCACATGCACACACACACACACACACACTTAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCTTCATATCCACATGCACACACACACACACACACACTTAAATA  300

seq1  TAAAAATTCCTTCAATTCCAGCACTCAGGAGGCAGAGGTGGGCGGAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTCCTTCAATTCCAGCACTCAGGAGGCAGAGGTGGGCGGAGATA  350

seq1  AGTTTGAAGTTAGCCTGTTCTGATCTATATAGAGACTGTCAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAAGTTAGCCTGTTCTGATCTATATAGAGACTGTCAAAAAAAAAA  400

seq1  AAATCCTGGTGTGGTGGCATATGGCTTCAATTCCAGTACCAGGGATGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGGTGTGGTGGCATATGGCTTCAATTCCAGTACCAGGGATGCAG  450

seq1  ATAGAGAGGCAGGAGGATGTCTGTGACTTCGAGGCTTGTCTGGTCAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGGCAGGAGGATGTCTGTGACTTCGAGGCTTGTCTGGTCAACTC  500

seq1  AGTGAGTTTCAGGATAGCTAGGACTACATAGTGAAACCCTGACTCAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTTCAGGATAGCTAGGACTACATAGTGAAACCCTGACTCAGAAA  550

seq1  ACAAAAACAAACAAACCAAAAATTAAAGAGATAACTAAGATGACCCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAACAAACCAAAAATTAAAGAGATAACTAAGATGACCCAGGG  600

seq1  TTTCTGCATAGGTCTGTGAGGACACAGGCTTCAGTGGCCAGGCCTGCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCATAGGTCTGTGAGGACACAGGCTTCAGTGGCCAGGCCTGCCCA  650

seq1  CCTTGACCTCAAGGGCTGACACTGCCACCTGACCTACCCCTTCATAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACCTCAAGGGCTGACACTGCCACCTGACCTACCCCTTCATAAGAT  700

seq1  TTTGTTCTGGCAGTCCTAGCAGACATTAATAAGCATGTATACTCATCCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTGGCAGTCCTAGCAGACATTAATAAGCATGTATACTCATCCGT  750

seq1  CCTCTCATTTACCCGGTTCAGGAAGGTGGAGGCCTAGAGTGGCCAAGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATTTACCCGGTTCAGGAAGGTGGAGGCCTAGAGTGGCCAAGGGG  800

seq1  TTTGTGTGCCTCCTGTGGTATGGTGTCACATCTGGAGGCTGGGTGAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGCCTCCTGTGGTATGGTGTCACATCTGGAGGCTGGGTGAGGAG  850

seq1  GTGGGCAGCGCAGCCTGCAGTGACCAGCAT-GGGCCAGTCTGGACATCTT  899
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  GTGGGCAGCGCACCCTGCAGTGACCAGCATGGGGCCAGTCTGGACATCTT  900

seq1  GGGTATACT-GACATGCCCTGAGCTGAGGGGATCCCAGTGTGTCTGCTGG  948
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATACTGGACATGCCCTGAGCTGAGGGGATCCCAGTGTGTCTGCTGG  950

seq1  CTGAGTGTCCAGCTGTGGCGGGCAAGGAATCTCAGGGTGTGTCTTGAGTG  998
      |||||||| ||||||||||||| ||||||||||| |||||||||||| ||
seq2  CTGAGTGT-CAGCTGTGGCGGGAAAGGAATCTCA-GGTGTGTCTTGAATG  998

seq1  ATATCAGCCAAATCCC-TCCCTAGTTGTAAAAGTAAA-GCT--CGACTCT  1044
      |||||||||||||||| ||| |||||||| | ||||| |||   ||||||
seq2  ATATCAGCCAAATCCCTTCCGTAGTTGTAGAGGTAAAGGCTTCGGACTCT  1048

seq1  TCCACGACCCTTATAG-TCGTGGCTAGGGGCAGAA  1078
      | ||||||| | |||| ||||||||| | ||||||
seq2  TTCACGACCTTAATAGTTCGTGGCTA-GTGCAGAA  1082