BAC Information

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BAC

Clone NameB6Ng01-188P13
Chromosome7 (Build37)
Map Location 90,424,876 - 90,425,896
singlet/doubletsinglet
Overlap genenone
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188P13.bB6Ng01-188P13.g
ACCGA013117GA013118
length1,0961,204
definitionB6Ng01-188P13.b B6Ng01-188P13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattttggcttatgtttccaaagggttaaagtccataatggtgga
aagagcatggatgcagaatcgggaagctgagtgctcacatctttacccac
aggtatgaaacacagagagcaaacttcgagaaggtagggctatttaatct
taaagctcgcttccagtgacatacttccttcaacaagcctacaccaccta
aacatccccaagcaatgcaaccaacacaagctgaaatagtcttagcaaag
ggaacctcaattaagaatctgactccactaagttgtcctgtggacaagac
tgtggtgcattttcttgactgatgactatgatgtggagggcccagcacac
tgtgggtgatgccatgcctaggctggtgttcctgggtgttataagaagga
acgcagaataaatcactaagcaacactcccccacggtctctgaatcagtt
cctgcctccaggtcctctcttgacttccttggatggtggactgactatag
gctgtaggatgaaagaaactcaagttgcttttgagcatgatgttttatct
cagcaatagaaactctaactaaaatggatggttagtgaatgttcatttat
cagagaagactgagaccaagcatgtataatggttgacttagggtcttcaa
attcataaggactgacttggaggctactctgcctgcttttgatccaaagc
tacatgtttccccattctttgacaaagaagcccagagtaagtgattaggg
catatgatagtattttgttgtcaactgttgtcttttattataaattttca
cttatttcagttattcccactttccctggtgataaggccaaagccacttc
atgctatagggtgattatccagcaatttgttgctgtgagcctgaccctga
ccatggtgaaggtacttccactgttgcaactgccaaatgctctaagtcag
ggctgtggtctggagacaggagcaagattgttgccttaattccactccct
agactcagatggcatatttgtgccacaattctttgtatttgcaaaattct
tttcctatgacatgtctcttgtgttcttgaagcatctcaagatcac
gaattctcacctgaggaataccgaatggctgagaaacacatgaaaagatg
ttcagcatccttaatcatcagggacatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcttgatgtggagaaagaggaacactccttcattgttggtgg
gattacaagcttatacaaccactctggaaatcagtctggtggtttctcag
aaaattggacatggtactaccggaggatcctgcaatacctctcctgggca
tatatccagaagatgttcaaactagtaagaaagaaacatgcttcactatg
ttcatagcagccttatttataatagccagaagctggcaagaacccagatg
cccctcaacaaaggaatggatacaaaaatgtggtacatttacacaatgga
gtactactcagctgttaaaaagaatgaatttatgaaattcctaggcaaat
ggttggacctggagggcattatcctgagtgaggtaacccaatcacaaaag
aactcaaatgatatgtactcactgataagtgaatattagcccagaaactt
agaatacccaatatataagttacaattttcaaaacacatgaaactcaaga
agaacgaaaaccaaagtgtgggcactttgccccttcttataattgggaat
aaaacacccatggaaggaggtacagagacaaaatttggagctgcacaaaa
ggatggaccgtctagagactgccatatccagggatccatcccataatcat
cctccaaacgttgacaccattgcatacactagcaagattgtgctgaaagg
acccagatatagctgtctcttgtgagactatgctggggcctagcaaacac
ataagtggatgctcacagtcagctattgggcagatcacagggctcccaat
ggaggagcttagaggaaattacttaaggagctcaagggatctgcaactcc
taataggtgcaacaacattatggacttacagttaccccagagcttcttga
ctctagctgcatatgtcttcaaaagatgcttagtcggccatcactgggaa
agaagagactccatggacatgccaaccttaatatgtcccagtacaggtac
gtcaggactaaattggaattggtgtggttatgcgcagagtcattcctatc
gtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90424876_90425896
seq2: B6Ng01-188P13.b_124_1145

seq1  AGCTGAGTGCTCACATCTTTACCCACAGGTATGAAACACAGAGAGCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTGCTCACATCTTTACCCACAGGTATGAAACACAGAGAGCAAAC  50

seq1  TTCGAGAAGGTAGGGCTATTTAATCTTAAAGCTCGCTTCCAGTGACATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGAAGGTAGGGCTATTTAATCTTAAAGCTCGCTTCCAGTGACATAC  100

seq1  TTCCTTCAACAAGCCTACACCACCTAAACATCCCCAAGCAATGCAACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCAACAAGCCTACACCACCTAAACATCCCCAAGCAATGCAACCAA  150

seq1  CACAAGCTGAAATAGTCTTAGCAAAGGGAACCTCAATTAAGAATCTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTGAAATAGTCTTAGCAAAGGGAACCTCAATTAAGAATCTGACT  200

seq1  CCACTAAGTTGTCCTGTGGACAAGACTGTGGTGCATTTTCTTGACTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAGTTGTCCTGTGGACAAGACTGTGGTGCATTTTCTTGACTGATG  250

seq1  ACTATGATGTGGAGGGCCCAGCACACTGTGGGTGATGCCATGCCTAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGATGTGGAGGGCCCAGCACACTGTGGGTGATGCCATGCCTAGGCT  300

seq1  GGTGTTCCTGGGTGTTATAAGAAGGAACGCAGAATAAATCACTAAGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCCTGGGTGTTATAAGAAGGAACGCAGAATAAATCACTAAGCAAC  350

seq1  ACTCCCCCACGGTCTCTGAATCAGTTCCTGCCTCCAGGTCCTCTCTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCCACGGTCTCTGAATCAGTTCCTGCCTCCAGGTCCTCTCTTGAC  400

seq1  TTCCTTGGATGGTGGACTGACTATAGGCTGTAGGATGAAAGAAACTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGATGGTGGACTGACTATAGGCTGTAGGATGAAAGAAACTCAAG  450

seq1  TTGCTTTTGAGCATGATGTTTTATCTCAGCAATAGAAACTCTAACTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTGAGCATGATGTTTTATCTCAGCAATAGAAACTCTAACTAAAA  500

seq1  TGGATGGTTAGTGAATGTTCATTTATCAGAGAAGACTGAGACCAAGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGTTAGTGAATGTTCATTTATCAGAGAAGACTGAGACCAAGCATG  550

seq1  TATAATGGTTGACTTAGGGTCTTCAAATTCATAAGGACTGACTTGGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGGTTGACTTAGGGTCTTCAAATTCATAAGGACTGACTTGGAGGC  600

seq1  TACTCTGCCTGCTTTTGATCCAAAGCTACATGTTTCCCCATTCTTTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCCTGCTTTTGATCCAAAGCTACATGTTTCCCCATTCTTTGACA  650

seq1  AAGAAGCCCAGAGTAAGTGATTAGGGCATATGATAGTATTTTGTTGTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCCAGAGTAAGTGATTAGGGCATATGATAGTATTTTGTTGTCAA  700

seq1  CTGTTGTCTTTTATTATAAATTTTCACTTATTTCAGTTATTCCCACTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTCTTTTATTATAAATTTTCACTTATTTCAGTTATTCCCACTTTC  750

seq1  CCTGGTGATAAGGCCAAAGCCACTTCATGCTATAGGGTGATTATCCAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGATAAGGCCAAAGCCACTTCATGCTATAGGGTGATTATCCAGCA  800

seq1  ATTTGTTGCTGTGAGCCTGACCCTGACCATGGTGAAGGTACTTCCACTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTGCTGTGAGCCTGACCCTGACCATGGTGAAGGTACTTCCACTGT  850

seq1  TGCAACTGCCAAATGCTCTAAGTCAGGGCTGTGGTCTGGAGAACAGGAGC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGCAACTGCCAAATGCTCTAAGTCAGGGCTGTGGTCTGGAG-ACAGGAGC  899

seq1  AAGA-TGTTGCCTT-ATTCCACTCCCTAGACTCAGATGGCATATTTGTG-  947
      |||| ||||||||| |||||||||||||||||||||||||||||||||| 
seq2  AAGATTGTTGCCTTAATTCCACTCCCTAGACTCAGATGGCATATTTGTGC  949

seq1  CACAATTCTTTGTATTTGCAAAATTCTTTTCCTATGACATGTCCTCTGTG  997
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  CACAATTCTTTGTATTTGCAAAATTCTTTTCCTATGACATGTCTCTTGTG  999

seq1  TTCTTGAAAGCATCTCAAGATCAC  1021
      |||||| |||||||||||||||||
seq2  TTCTTG-AAGCATCTCAAGATCAC  1022