BAC Information

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BAC

Clone NameB6Ng01-189E07
Chromosome7 (Build37)
Map Location 30,277,274 - 30,278,040
singlet/doubletsinglet
Overlap geneSipa1l3
Upstream gene1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4
Downstream geneLOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189E07.bB6Ng01-189E07.g
ACCGA013337GA013338
length7661,115
definitionB6Ng01-189E07.b B6Ng01-189E07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctcaacaaatagagaatggttgctgggggctcaagtgcagaat
ctggccccaggaaggacagctcatatctcactcagactaagctcttaaca
caaacttctttttttcctgttgtttttgctttgtttcgtttagttgcttg
gtttttcaagacagggtttctctgtgtagttgtggctatcttggatccag
gctggctttgaacgcacagagatctacccgcctctgcctcccaagtgttg
gtactaaaggcatgcaccaccaaggtcagcctaacaaaaacttctttaat
acaccatctaactaggtagaaatatattctcccttccttccttaagacag
gccctcatgcagcccgggctagcctccaagtttatgatgcagccaaggct
gaccctgagctcctgagctgcctcagcctcccacatgccaggattgcaga
cctggccatcaccagcctgtgcagctatgaaatgttctgaagccccttcg
gcatctccatttgagagatgaagaaagctttagaaagtctgtgagatgaa
atgaagattgcaggctaatggaagtctgtgcctgagaggccatcttggaa
ttcaacaatagccctgcctagacaggtccccatgcagggggcctggagga
caaaaaatctgagacacccacccctgccagcaccctgcactggcattttt
cacagtcagagacacagacaccttggccagagcactgaggtgtgtgtgtg
tgtgtgtgtggtgtgt
gaattcttgatgaaaattaataactgccacctgcgtgctgttggaggtag
gaatgcacgcctgctgcagtcgggctgaagggcgttgactgacctgcttg
aaaacaacgtctagacagtgaaaggcacagtacaaaagcttctattgggg
aagtccaggtactccattcaattgcaaattagcaccaaccaggctagact
tagagctccctctgtgggggaggtgactttgagaattgcagaaaggctta
cagcttccctgggagtggaggctgtgctttaatttaactttttggctaaa
gaggatttttagccataatcaaggttagagtcatacttactggaagattc
aggatctgtgtccagttgacgaactactctctcaggcagccatcgcgctc
catcttccttttgtgaaaaaaaacacagaccaagccccttccccagatta
ggaccaggtctggaccctttcattcattagttaatgggtcccgccacttt
accatggcataagaactagaagtaactggatgccagtggcaatccgatac
agactgacctttaacatcaatttgcaaaaaaacgtagaacaaataaagca
aaagcaagatgtgcctttggtgaccctggggaatataactgcccctgttt
tgtttttaaaagccaattttttaaagtgcaatgagtacattcaactattc
cttctcccatggggttataaggaatctcagttgtatatttgatgccaaat
tctttacaaaatgaagtaaaatttttgctagaataggatggcccgttacc
tgtcttaataagtttaggcaatcccatggcattaaaggcttgttaggcaa
tgatcaattacattttttagaagcctctcctgttatgcagagacgcaaaa
agaatcctgaacaaatatcaatacaaacatgtatatattttattttccca
aattctgcatataagttacatccatttgccaaatatgattaggcactgga
gataatgtatacattagatattgttttacagtcatctgcctgctccttag
tgatcttagtgagcctatgtctgctagagaagctgaaatttcatgaactc
atgccttggccaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30277274_30278040
seq2: B6Ng01-189E07.b_42_807

seq1  GAATTCCCTCAACAAATAGAGAATGGTTGCTGGGGGCTCAAGTGCAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCAACAAATAGAGAATGGTTGCTGGGGGCTCAAGTGCAGAAT  50

seq1  CTGGCCCCAGGAAGGACAGCTCATATCTCACTCAGACTAAGCTCTTAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCCAGGAAGGACAGCTCATATCTCACTCAGACTAAGCTCTTAACA  100

seq1  CAAACTTCTTTTTTTCCTGTTGTTTTTGCTTTGTTTCGTTTAGTTGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCTTTTTTTCCTGTTGTTTTTGCTTTGTTTCGTTTAGTTGCTTG  150

seq1  GTTTTTCAAGACAGGGTTTCTCTGTGTAGTTGTGGCTATCTTGGATCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAAGACAGGGTTTCTCTGTGTAGTTGTGGCTATCTTGGATCCAG  200

seq1  GCTGGCTTTGAACGCACAGAGATCTACCCGCCTCTGCCTCCCAAGTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTTGAACGCACAGAGATCTACCCGCCTCTGCCTCCCAAGTGTTG  250

seq1  GTACTAAAGGCATGCACCACCAAGGTCAGCCTAACAAAAACTTCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAAAGGCATGCACCACCAAGGTCAGCCTAACAAAAACTTCTTTAAT  300

seq1  ACACCATCTAACTAGGTAGAAATATATTCTCCCTTCCTTCCTTAAGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATCTAACTAGGTAGAAATATATTCTCCCTTCCTTCCTTAAGACAG  350

seq1  GCCCTCATGCAGCCCGGGCTAGCCTCCAAGTTTATGATGCAGCCAAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCATGCAGCCCGGGCTAGCCTCCAAGTTTATGATGCAGCCAAGGCT  400

seq1  GACCCTGAGCTCCTGAGCTGCCTCAGCCTCCCACATGCCAGGATTGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGAGCTCCTGAGCTGCCTCAGCCTCCCACATGCCAGGATTGCAGA  450

seq1  CCTGGCCATCACCAGCCTGTGCAGCTATGAAATGTTCTGAAGCCCCTTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCATCACCAGCCTGTGCAGCTATGAAATGTTCTGAAGCCCCTTCG  500

seq1  GCATCTCCATTTGAGAGATGAAGAAAGCTTTAGAAAGTCTGTGAGATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCCATTTGAGAGATGAAGAAAGCTTTAGAAAGTCTGTGAGATGAA  550

seq1  ATGAAGATTGCAGGCTAATGGAAGTCTGTGCCTGAGAGGCCATCTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGATTGCAGGCTAATGGAAGTCTGTGCCTGAGAGGCCATCTTGGAA  600

seq1  TTCAACAATAGCCCTGCCTAGACAGGTCCCCATGCAGGGGGCCTGGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAATAGCCCTGCCTAGACAGGTCCCCATGCAGGGGGCCTGGAGGA  650

seq1  CAAAAAATCTGAGACACCCACCCCTGCCAGCACCCTGCACTGGCATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATCTGAGACACCCACCCCTGCCAGCACCCTGCACTGGCATTTTT  700

seq1  CACAGTCAGAGACACAGACACCTTGGCCAGAGCACTGAGGTGTGTGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAGAGACACAGACACCTTGGCCAGAGCACTGAGGTGTGTGTGTG  750

seq1  TGTGTGTGTGTGTGTGT  767
      |||||||||| ||||||
seq2  TGTGTGTGTG-GTGTGT  766