BAC Information

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BAC

Clone NameB6Ng01-189E21
Chromosome7 (Build37)
Map Location 77,499,876 - 77,634,340
singlet/doubletdoublet
Overlap geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838
Upstream geneEG665410
Downstream geneLOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189E21.bB6Ng01-189E21.g
ACCGA013364GA013365
length1,121340
definitionB6Ng01-189E21.b B6Ng01-189E21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,633,224 - 77,634,340)(77,499,876 - 77,500,215)
sequence
ggaattcatttatgtttcagatatactttatccacacaaattcaagacaa
ttttacataatacttttagtgcaaatgaattttgcctctaccccattaca
tgaggtcagacaagaaagttctgttggtagtgccatgatgatgctccaaa
gggttttttgcaaaatgcctgcaacattttggatatttaattatccagtt
aaagatatacttaaacggcaatggtccacacaggtactcattcatctagg
actggggaattctaagatgtagtgtttttctatctaaacccagcacagtc
tgggaaacacagtggattttcagtcattatcttgctccccctacctcaaa
ggctttactatctgataacattcagtttgctctgtgtgtgtttatttatc
agttcctttggtctagaataaaatccctatgagggtccagagaaatcttg
gcattatatgattgtagggctaaggtgtaagtactaagtaactattgaaa
atcaagtgaatttttgtattagttgattgagtcctttgtatttgtttaca
tgtgtatacaaatgtgatatatacgtggggggtgcatgcgtgggtgcatg
tgtgtggaagcctgtagttgaaatagaattgctaaattgattgctctcca
ccttatttattgagtcaggttctctcactgaacccagagctcactgattc
cagttggtgtagctagccagcctgttttgagtaatcccctgcctcggtct
cccagaggctgagattacagatgactgcgacaccttccccacttttgtgt
aggtggtgaggattcaccattgagacatttccccaggtctgatgccttaa
aaaaaaagtctagttttccagttttaaatttaacaacataataagaaatg
taaagttctgtgggacaccacgattgatgaaggagcattctgtgaaggaa
aaatgccaagtgaattttaaacgattgggcctatgagttgtaaagaattc
aaattactgcattccttctcatctgatccccaacttctgtatgaaagaaa
tatagacatttctaccatttactcttggaatgtttggctgtagcgaggat
atcactcaaatgtggttaaat

atcagattaagaggttggaaatgggtcacctgaggtgcctacagtgctct
gtcaaactgccccatccagagttggagaaaatgcttatacactaaaaact
tcaagggggaggagggaggtgacgaagcttgagatggtcctggagtgttt
actttaaaataaaacacgcttgggtgatgcaggctttcatggctccagtc
ctcaggctgggtcattgggaggcctaagacagtgtattggtgcaaagtac
ccagacaaacagaacccaaccatcaatacttctccccccatcctctgaat
ttggcttattatacagtgtgcatggggattgggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77633224_77634340
seq2: B6Ng01-189E21.b_47_1167 (reverse)

seq1  ATTTAA-CACA-TTGAGTGATA--CTCGCTACAGCC-AACATTCC-AGAG  44
      |||||| |||| ||||||||||  |||||||||||| |||||||| ||||
seq2  ATTTAACCACATTTGAGTGATATCCTCGCTACAGCCAAACATTCCAAGAG  50

seq1  TAAATGGTAGAAATGTCTATATTTCTTTCATTACAG-AGTTGGGGATCAG  93
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  TAAATGGTAGAAATGTCTATATTTCTTTCA-TACAGAAGTTGGGGATCAG  99

seq1  ATGAGAAGGAATGCAGTTATTTGAATTCTTTACAACCTCATAGGCCCAAT  143
      ||||||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  ATGAGAAGGAATGCAGTAATTTGAATTCTTTACAA-CTCATAGGCCCAAT  148

seq1  CGTTTAAAATTCACTTGGCATTTTTCCTTCACAGAATGCTCCTTCATCAA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTAAAATTCACTTGGCATTTTTCCTTCACAGAATGCTCCTTCATCAA  198

seq1  TCGTGGTGTCCCACAGAACTTTACATTTCTTATTATGTTGTTAAATTTAA  243
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCGTGGTGTCCCACAGAACTTTACATTTCTTATTATGTTGTTAAATTT-A  247

seq1  AAACTGGAAAACTAGACTTTTTTTTTAAGGCATCAGACCTGGGGAAATGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAAAACTAGACTTTTTTTTTAAGGCATCAGACCTGGGGAAATGT  297

seq1  CTCAATGGTGAATCCTCACCACCTACACAAAAGTGGGGAAGGTGTCGCAG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGGTGAATCCTCACCACCTACACAAAAGTGGGGAAGGTGTCGCAG  347

seq1  TCATCTGTAATCTCAGCCTCTGGGAGACCGAGGCAGGGGATTACTCAAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTAATCTCAGCCTCTGGGAGACCGAGGCAGGGGATTACTCAAAA  397

seq1  CAGGCTGGCTAGCTACACCAACTGGAATCAGTGAGCTCTGGGTTCAGTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCTAGCTACACCAACTGGAATCAGTGAGCTCTGGGTTCAGTGA  447

seq1  GAGAACCTGACTCAATAAATAAGGTGGAGAGCAATCAATTTAGCAATTCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCTGACTCAATAAATAAGGTGGAGAGCAATCAATTTAGCAATTCT  497

seq1  ATTTCAACTACAGGCTTCCACACACATGCACCCACGCATGCACCCCCCAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAACTACAGGCTTCCACACACATGCACCCACGCATGCACCCCCCAC  547

seq1  GTATATATCACATTTGTATACACATGTAAACAAATACAAAGGACTCAATC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATCACATTTGTATACACATGTAAACAAATACAAAGGACTCAATC  597

seq1  AACTAATACAAAAATTCACTTGATTTTCAATAGTTACTTAGTACTTACAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATACAAAAATTCACTTGATTTTCAATAGTTACTTAGTACTTACAC  647

seq1  CTTAGCCCTACAATCATATAATGCCAAGATTTCTCTGGACCCTCATAGGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCCTACAATCATATAATGCCAAGATTTCTCTGGACCCTCATAGGG  697

seq1  ATTTTATTCTAGACCAAAGGAACTGATAAATAAACACACACAGAGCAAAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTCTAGACCAAAGGAACTGATAAATAAACACACACAGAGCAAAC  747

seq1  TGAATGTTATCAGATAGTAAAGCCTTTGAGGTAGGGGGAGCAAGATAATG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTATCAGATAGTAAAGCCTTTGAGGTAGGGGGAGCAAGATAATG  797

seq1  ACTGAAAATCCACTGTGTTTCCCAGACTGTGCTGGGTTTAGATAGAAAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAATCCACTGTGTTTCCCAGACTGTGCTGGGTTTAGATAGAAAAA  847

seq1  CACTACATCTTAGAATTCCCCAGTCCTAGATGAATGAGTACCTGTGTGGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATCTTAGAATTCCCCAGTCCTAGATGAATGAGTACCTGTGTGGA  897

seq1  CCATTGCCGTTTAAGTATATCTTTAACTGGATAATTAAATATCCAAAATG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCCGTTTAAGTATATCTTTAACTGGATAATTAAATATCCAAAATG  947

seq1  TTGCAGGCATTTTGCAAAAAACCCTTTGGAGCATCATCATGGCACTACCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGCATTTTGCAAAAAACCCTTTGGAGCATCATCATGGCACTACCA  997

seq1  ACAGAACTTTCTTGTCTGACCTCATGTAATGGGGTAGAGGCAAAATTCAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTTTCTTGTCTGACCTCATGTAATGGGGTAGAGGCAAAATTCAT  1047

seq1  TTGCACTAAAAGTATTATGTAAAATTGTCTTGAATTTGTGTGGATAAAGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTAAAAGTATTATGTAAAATTGTCTTGAATTTGTGTGGATAAAGT  1097

seq1  ATATCTGAAACATAAATGAATTCC  1117
      ||||||||||||||||||||||||
seq2  ATATCTGAAACATAAATGAATTCC  1121


seq1: chr7_77499876_77500215
seq2: B6Ng01-189E21.g_73_412

seq1  ATCAGATTAAGAGGTTGGAAATGGGTCACCTGAGGTGCCTACAGTGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTAAGAGGTTGGAAATGGGTCACCTGAGGTGCCTACAGTGCTCT  50

seq1  GTCAAACTGCCCCATCCAGAGTTGGAGAAAATGCTTATACACTAAAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACTGCCCCATCCAGAGTTGGAGAAAATGCTTATACACTAAAAACT  100

seq1  TCAAGGGGGAGGAGGGAGGTGACGAAGCTTGAGATGGTCCTGGAGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGGGAGGAGGGAGGTGACGAAGCTTGAGATGGTCCTGGAGTGTTT  150

seq1  ACTTTAAAATAAAACACGCTTGGGTGATGCAGGCTTTCATGGCTCCAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAATAAAACACGCTTGGGTGATGCAGGCTTTCATGGCTCCAGTC  200

seq1  CTCAGGCTGGGTCATTGGGAGGCCTAAGACAGTGTATTGGTGCAAAGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTGGGTCATTGGGAGGCCTAAGACAGTGTATTGGTGCAAAGTAC  250

seq1  CCAGACAAACAGAACCCAACCATCAATACTTCTCCCCCCATCCTCTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAAACAGAACCCAACCATCAATACTTCTCCCCCCATCCTCTGAAT  300

seq1  TTGGCTTATTATACAGTGTGCATGGGGATTGGGGGGGGGG  340
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTATTATACAGTGTGCATGGGGATTGGGGGGGGGG  340


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