BAC Information

Click to search

BAC

Clone NameB6Ng01-189L19
Chromosome7 (Build37)
Map Location 119,611,934 - 119,828,518
singlet/doubletdoublet
Overlap geneParva, LOC627808, Tead1
Upstream geneGalntl4, LOC668399, LOC100042678, Usp47, Dkk3, Mical2, Micalcl
Downstream gene4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189L19.bB6Ng01-189L19.g
ACCGA013678GA013679
length1,0491,044
definitionB6Ng01-189L19.b B6Ng01-189L19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,611,934 - 119,612,973)(119,827,498 - 119,828,518)
sequence
gaattctgtcccccagaacccatggtaggagaaaacagactccagaaagt
tctcctctgatctccacatgtgtgggcacatgtgtaataacatccatgtc
acgtcactagggcttactggttgccaatgtagcctgaaaacacaactcta
ggctcaatgaaagactgtctcaaaggtttttctttctttgttcttttaaa
agatcccttcatttcttttcctttagatatttaggtgaacagtaataatt
ttaaaataggctttaatttgttttttttttggagaagacttgaatttata
gagaatatatggggctaatacagggtcctcatgtatatctcatacccttc
cccctactgtagactcacgctggtgggagaccttggttacagtgggtgag
ccagtactgatgcacagctttcactagaggacacacccacactttgtttg
gattctcttagctcttcttacctaagaaccatctttctctgctccgggac
cacatttccttaggtgggcccagattcctaatctccttgtggtagggata
ggtttcaggctttccttggttcttatattttctttctaaaatttttgcct
ttttttttttttttttttggtgtgatgaacatttttggcctgcttgtata
tctgtgcgtcttattcatatagtgctcacagaggcaaaaacaaaacaaaa
caaaacaaaacaaaaaaagtacctgatctttctaggactagggttacaga
tgggtgtgagccaccatgttggctaggaatcaaacccaggtcctctggaa
gagcaacaagtgctccctaaccacttgagccatctgttccagcccctaga
gcttatattttccaggaagttgggtgcttctgatcatctcctcatagtca
ggctgcgttgagttggtggggtcatggatgggcctacgtagcgtctgtga
agttggaaatcaaatgatgtatgaagctacagcatgctctagtaaagtca
gtgctgacacaatcgatacacaaggcttcaagaaaggagccttctccgt
gaattcagttcttcggagccagagcaaatgaagtcatttggtttctgtgg
gttctctatgcacttcggcagtaggaaaccggccatccaagttggccttt
cctcattaactccgttttccttgaaaaagacagtaaagtcatagcaaaat
tctaggatatggggcactgaaatggatgctgtcaaagccatcaggaagtc
atggtgtgaagacaaacaggtatcgccttccaaaggcttgggttggcatg
acagaccgacccggactttggtcaaattatgtatcttctcagagggtttc
ctgtctttgcagatgatcataaaatattcatttatctagttgactaccta
ttaggggaaaaaagacactggttcccaataagaactctgcagctacagtg
tcaggtgacattaaagctgccctaagatgcaggagctcaaggtggttcaa
agcaaaaatgcaggcagaaggctctccctcaatcctcacagcagagcttc
ggcagaaagatactggtttcatctgttgacaccagccccatacctaagtg
gacaacattcttggatgaacttctcaaattttcttaaacagtctcagatt
taaaatctcctttcaagttaaattgagattgcacttgaaactctatccaa
gagcaaagctgaactgaattatgataattagaaagctgtgtctataattt
ttttaagaagtcagtagagtttgatatattttttttaaaagttcatgcca
gagaatataagttcagtgtgttcccacataactaacatttctcaccatgg
ttgagcagtttttcagttttaccccatcagtacctgcttgggtagtccca
ggttctcagtacagacaaatcgtgtcagatgcctgagaagcttccagaac
ttccccttgcagaaggtggacccttcaacttctcatcagttaaattaagt
ccactttttaatgtcttaagctcactttcccaaccgctcctattcttcca
ccattaaaaaaaagtttatacgggggtttgacatgtggtctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119611934_119612973
seq2: B6Ng01-189L19.b_48_1096

seq1  GAATTCTGTCCCCCAGAACCCATGGTAGGAGAAAACAGACTCCAGAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCCCCAGAACCCATGGTAGGAGAAAACAGACTCCAGAAAGT  50

seq1  TCTCCTCTGATCTCCACATGTGTGGGCACATGTGTAATAACATCCATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTGATCTCCACATGTGTGGGCACATGTGTAATAACATCCATGTC  100

seq1  ACGTCACTAGGGCTTACTGGTTGCCAATGTAGCCTGAAAACACAACTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCACTAGGGCTTACTGGTTGCCAATGTAGCCTGAAAACACAACTCTA  150

seq1  GGCTCAATGAAAGACTGTCTCAAAGGTTTTTCTTTCTTTGTTCTTTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAATGAAAGACTGTCTCAAAGGTTTTTCTTTCTTTGTTCTTTTAAA  200

seq1  AGATCCCTTCATTTCTTTTCCTTTAGATATTTAGGTGAACAGTAATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCTTCATTTCTTTTCCTTTAGATATTTAGGTGAACAGTAATAATT  250

seq1  TTAAAATAGGCTTTAATTTGTTTTTTTTTTGGAGAAGACTTGAATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAGGCTTTAATTTGTTTTTTTTTTGGAGAAGACTTGAATTTATA  300

seq1  GAGAATATATGGGGCTAATACAGGGTCCTCATGTATATCTCATACCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATATGGGGCTAATACAGGGTCCTCATGTATATCTCATACCCTTC  350

seq1  CCCCTACTGTAGACTCACGCTGGTGGGAGACCTTGGTTACAGTGGGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACTGTAGACTCACGCTGGTGGGAGACCTTGGTTACAGTGGGTGAG  400

seq1  CCAGTACTGATGCACAGCTTTCACTAGAGGACACACCCACACTTTGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACTGATGCACAGCTTTCACTAGAGGACACACCCACACTTTGTTTG  450

seq1  GATTCTCTTAGCTCTTCTTACCTAAGAACCATCTTTCTCTGCTCCGGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCTTAGCTCTTCTTACCTAAGAACCATCTTTCTCTGCTCCGGGAC  500

seq1  CACATTTCCTTAGGTGGGCCCAGATTCCTAATCTCCTTGTGGTAGGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCCTTAGGTGGGCCCAGATTCCTAATCTCCTTGTGGTAGGGATA  550

seq1  GGTTTCAGGCTTTCCTTGGTTCTTATATTTTCTTTCTAAAATTTTTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAGGCTTTCCTTGGTTCTTATATTTTCTTTCTAAAATTTTTGCCT  600

seq1  TTTTTTTTTTTTTTTTTTGGTGTGATGAACATTTTTGGCCTGCTTGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTGGTGTGATGAACATTTTTGGCCTGCTTGTATA  650

seq1  TCTGTGCGTCTTATTCATATAGTGCTCACAGAGGCAAAAAACAAAACAAA  700
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTGTGCGTCTTATTCATATAGTGCTCACAGAGGC-AAAAACAAAACAAA  699

seq1  ACAAAACAAAACAAAAAAAGTACCTGATC-TTCTAGGACTAGGGTTACAG  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAAAACAAAACAAAAAAAGTACCTGATCTTTCTAGGACTAGGGTTACAG  749

seq1  ATGGGTGTGAGCCACCATG-TGGCTAGGAATCAAACCCAGGTCCTCTGGA  798
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGGGTGTGAGCCACCATGTTGGCTAGGAATCAAACCCAGGTCCTCTGGA  799

seq1  AGAGCAACAAGTGCT-CCTAACCAC-TGAGCCATCTG-TCCAGCCCCTAG  845
      ||||||||||||||| ||||||||| ||||||||||| ||||||||||||
seq2  AGAGCAACAAGTGCTCCCTAACCACTTGAGCCATCTGTTCCAGCCCCTAG  849

seq1  AGCTTATA-TTTCCAGGAAGTTGGGTGCTTCTGATCATCTCCTCATAGTC  894
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATATTTTCCAGGAAGTTGGGTGCTTCTGATCATCTCCTCATAGTC  899

seq1  AGGCTGCGTTGAGTTGGT-GGGTCATGGAT-GGCCTACGTAGCGTCTGTG  942
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  AGGCTGCGTTGAGTTGGTGGGGTCATGGATGGGCCTACGTAGCGTCTGTG  949

seq1  AAGTTGG-AATCAAATGATGTATGAAGCCTACAGCATGCT-TAGAAAAGT  990
      ||||||| ||||||||||||||||||| |||||||||||| ||| |||||
seq2  AAGTTGGAAATCAAATGATGTATGAAG-CTACAGCATGCTCTAGTAAAGT  998

seq1  CAGTGCTGACACAAT-GATACACAAGGCTTTCAAGAAA-GAGCCTTCTCC  1038
      ||||||||||||||| |||||||||||| ||||||||| |||||||||||
seq2  CAGTGCTGACACAATCGATACACAAGGC-TTCAAGAAAGGAGCCTTCTCC  1047

seq1  GT  1040
      ||
seq2  GT  1049

seq1: chr7_119827498_119828518
seq2: B6Ng01-189L19.g_72_1115 (reverse)

seq1  CTGAG-CCACATGTCAA--CCCCGTATTAACATTTTTTTAATGGTGAAAG  47
      ||||| |||||||||||  |||||||| ||| |||||||||||||| |||
seq2  CTGAGACCACATGTCAAACCCCCGTATAAACTTTTTTTTAATGGTGGAAG  50

seq1  -ATA-GAGC-GTTGGGAAA-TGAGCTTAAGAC--TTAAAAGTGGAC-TAA  90
       ||| |||| ||||||||| ||||||||||||  | |||||||||| |||
seq2  AATAGGAGCGGTTGGGAAAGTGAGCTTAAGACATTAAAAAGTGGACTTAA  100

seq1  TTT-ACTGATGAAGAAGTTG-AGGGTCCACC-TCTGCAGGGGGAAGTTCT  137
      ||| ||||||| |||||||| |||||||||| |||||| |||||||||||
seq2  TTTAACTGATG-AGAAGTTGAAGGGTCCACCTTCTGCAAGGGGAAGTTCT  149

seq1  GGGAGCTTCTC-GGCATCTGACACG-TTTGTCTGTACTGAG-ACCTGGGA  184
      || |||||||| ||||||||||||| ||||||||||||||| ||||||||
seq2  GGAAGCTTCTCAGGCATCTGACACGATTTGTCTGTACTGAGAACCTGGGA  199

seq1  CTACCC-AGCA-GTACTGATGGG--TAAACTGAAAAACTGCTC-ACCATG  229
      |||||| |||| |||||||||||   ||||||||||||||||| ||||||
seq2  CTACCCAAGCAGGTACTGATGGGGTAAAACTGAAAAACTGCTCAACCATG  249

seq1  GTGAGAAATGTTAGTTATGTGGGAACACACTGAACTTATATTCTCTGGCA  279
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAATGTTAGTTATGTGGGAACACACTGAACTTATATTCTCTGGCA  299

seq1  TGAACTTTTAAAAAAAATATATC-AACTCTACTGACTTCTTAAAAAAATT  328
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGAACTTTTAAAAAAAATATATCAAACTCTACTGACTTCTTAAAAAAATT  349

seq1  ATAGACACAGCTTTCTAATTATCATAATTCAGTTCAGCTTTGCTCTTGGA  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACAGCTTTCTAATTATCATAATTCAGTTCAGCTTTGCTCTTGGA  399

seq1  TAGAG-TTCAAGTGCAATCTCAATTTAACTTGAAAGGAGATTTTAAATCT  427
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTTCAAGTGCAATCTCAATTTAACTTGAAAGGAGATTTTAAATCT  449

seq1  GAGACTGTTTAAGAAAATTTGAGAAGTTCATCCAAGAATGTTGTCCACTT  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGTTTAAGAAAATTTGAGAAGTTCATCCAAGAATGTTGTCCACTT  499

seq1  AGGTATGGGGCTGGTGTC-ACAGATGAAACCAGTATCTTTCTGCCGAAGC  526
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGGTATGGGGCTGGTGTCAACAGATGAAACCAGTATCTTTCTGCCGAAGC  549

seq1  TCTGCTGTGAGGATTGAGGGAGAGCCTTCTGCCTGCATTTTTGCTTTGAA  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTGAGGATTGAGGGAGAGCCTTCTGCCTGCATTTTTGCTTTGAA  599

seq1  CCACCTTGAGCTCCTGCATCTTAGGGCAGCTTTAATGTCACCTGACACTG  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTGAGCTCCTGCATCTTAGGGCAGCTTTAATGTCACCTGACACTG  649

seq1  TAGCTGCAGAGTTCTTATTGGGAACCAGTGTCTTTTTTCCCCTAATAGGT  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCAGAGTTCTTATTGGGAACCAGTGTCTTTTTTCCCCTAATAGGT  699

seq1  AGTCAACTAGATAAATGAATATTTTATGATCATCTGCAAAGACAGGAAAC  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACTAGATAAATGAATATTTTATGATCATCTGCAAAGACAGGAAAC  749

seq1  CCTCTGAGAAGATACATAATTTGACCAAAGTCCGGGTCGGTCTGTCATGC  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGAAGATACATAATTTGACCAAAGTCCGGGTCGGTCTGTCATGC  799

seq1  CAACCCAAGCCTTTGGAAGGCGATACCTGTTTGTCTTCACACCATGACTT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCAAGCCTTTGGAAGGCGATACCTGTTTGTCTTCACACCATGACTT  849

seq1  CCTGATGGCTTTGACAGCATCCATTTCAGTGCCCCATATCCTAGAATTTT  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGGCTTTGACAGCATCCATTTCAGTGCCCCATATCCTAGAATTTT  899

seq1  GCTATGACTTTACTGTCTTTTTCAAGGAAAACGGAGTTAATGAGGAAAGG  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGACTTTACTGTCTTTTTCAAGGAAAACGGAGTTAATGAGGAAAGG  949

seq1  CCAACTTGGATGGCCGGTTTCCTACTGCCGAAGTGCATAGAGAACCCACA  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTGGATGGCCGGTTTCCTACTGCCGAAGTGCATAGAGAACCCACA  999

seq1  GAAACCAAATGACTTCATTTGCTCTGGCTCCGAAGAACTGAATTC  1021
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAAATGACTTCATTTGCTCTGGCTCCGAAGAACTGAATTC  1044