BAC Information

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BAC

Clone NameB6Ng01-189N23
Chromosome7 (Build37)
Map Location 126,323,650 - 126,324,712
singlet/doubletsinglet
Overlap geneGpr139
Upstream gene2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
Downstream geneLOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189N23.bB6Ng01-189N23.g
ACCGA013777GA013778
length901,067
definitionB6Ng01-189N23.b B6Ng01-189N23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actctgtagaccaggctggccttgaactcagaaatctgcttgcctctgcc
tcccaagtgctgggattaaaggtgtgcaccaccactgccc
gaattcctatatggagtgtgggcagagctaaccacttagggaattcttag
gctgtcagttccacagtttgccccattggtaaaatgggttaaaatcaagt
gtaattacctccccgtgtaacatttattaattaagatactccatgtaaaa
atagcttaagtcatgcccgtggtctcagctattcacaagacagggggatt
tcttgaaatgagaagttgaaaggcagcttaggcagcatagcaaaacctta
ccccacaaaacattcaggatagcatctggtccaaaaaaggctcattttac
tcagggccttctccacaccaaatcttttcacccacagatgcatgtgaacc
cattttatggctgagtaacctgaggcgccgagaagtgctgcatctgccct
acagtaatagcatcaaaccaaagataaacgcacctgtactttctgttaag
tcgaatctcctctctttcccccaggaagctgttttaactaaccttgctcc
tccgatgctaaaaaaaaaaaaattagcaaagaacaccggcgcccctaccc
ttcatagagcccatccgtttctctccctcctccttcttaattgaggaaga
tacacttaagatgtcttatttctcaaaacacaggagttaagtaggcaaag
ccagggctgattggcatagtggagaagaagcactgtaatggaatggcaca
gggaaggaggaaactaggaactgaaagcccgggggaagacagcaagaggg
tgaagggtgggctgccctgataaggaaggaactgtgcaaagttaaacagg
gatttgaaagatttgttaatttttctttctgaaaagtgccccagacatga
aggaaagcagggtgaggaagggagatggtagcttaaatggtgcctcaccc
tataggaaggaaaggtttccacggctgcctagcagagtgatgagatctgt
ctctgatggctggggtgagaggaagggagcctgacacccggtagttacca
tgggtgttaaccaaaaggtaggatactaaggtgttcctgtgtaccagact
ggagctatgcagatacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126323650_126324712
seq2: B6Ng01-189N23.g_68_1134 (reverse)

seq1  CGTATCTGCATAGCT-CAGTCTGGT-CACAGGACCA-CTTAGTATCCTTA  47
      ||||||||||||||| ||||||||| ||||||| || |||||||||||  
seq2  CGTATCTGCATAGCTCCAGTCTGGTACACAGGAACACCTTAGTATCCTAC  50

seq1  CCTTTGGTTAACAACCATGGTAACTACCGTGTGTCAGGCTTCCTTCCTCT  97
      | ||||||||||| ||||||||||||||| |||||||||| |||||||||
seq2  CTTTTGGTTAACACCCATGGTAACTACCGGGTGTCAGGCTCCCTTCCTCT  100

seq1  CACCCCAGCCATCAGAGACAGATCTCATCACTCTGCTAGGCAGCCGTGGA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAGCCATCAGAGACAGATCTCATCACTCTGCTAGGCAGCCGTGGA  150

seq1  AACC-TTCCTTCCTATAGGGTGAGGCACCATTTTAAGCTACCATCT-CCT  195
      |||| ||||||||||||||||||||||||| ||||||||||||||| |||
seq2  AACCTTTCCTTCCTATAGGGTGAGGCACCA-TTTAAGCTACCATCTCCCT  199

seq1  TCCTCACCCTGCTTTCCTTCATGTCTGGGGCACTTTTCAGAAAGAAAAAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCCTGCTTTCCTTCATGTCTGGGGCACTTTTCAGAAAGAAAAAT  249

seq1  TAACAAATCTTTCAAATCCCTGTTTAACTTTGCACAGTTCCTTCCTTATC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATCTTTCAAATCCCTGTTTAACTTTGCACAGTTCCTTCCTTATC  299

seq1  AGGGCAGCCCACCCTTCACCCTCTTGCTGTCTTCCCCCGGGCTTTCAGTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGCCCACCCTTCACCCTCTTGCTGTCTTCCCCCGGGCTTTCAGTT  349

seq1  CCTAGTTTCCTCCTTCCCTGTGCCATTCCATTACAGTGCTTCTTCTCCAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTTCCTCCTTCCCTGTGCCATTCCATTACAGTGCTTCTTCTCCAC  399

seq1  TATGCCAATCAGCCCTGGCTTTGCCTACTTAACTCCTGTGTTTTGAGAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCAATCAGCCCTGGCTTTGCCTACTTAACTCCTGTGTTTTGAGAAA  449

seq1  TAAGACATCTTAAGTGTATCTTCCTCAATTAAGAAGGAGGAGGGAGAGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATCTTAAGTGTATCTTCCTCAATTAAGAAGGAGGAGGGAGAGAA  499

seq1  ACGGATGGGCTCTATGAAGGGTAGGGGCGCCGGTGTTCTTTGCTAATTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATGGGCTCTATGAAGGGTAGGGGCGCCGGTGTTCTTTGCTAATTTT  549

seq1  TTTTTTTTTAGCATCGGAGGAGCAAGGTTAGTTAAAACAGCTTCCTGGGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAGCATCGGAGGAGCAAGGTTAGTTAAAACAGCTTCCTGGGG  599

seq1  GAAAGAGAGGAGATTCGACTTAACAGAAAGTACAGGTGCGTTTATCTTTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGGAGATTCGACTTAACAGAAAGTACAGGTGCGTTTATCTTTG  649

seq1  GTTTGATGCTATTACTGTAGGGCAGATGCAGCACTTCTCGGCGCCTCAGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGCTATTACTGTAGGGCAGATGCAGCACTTCTCGGCGCCTCAGG  699

seq1  TTACTCAGCCATAAAATGGGTTCACATGCATCTGTGGGTGAAAAGATTTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAGCCATAAAATGGGTTCACATGCATCTGTGGGTGAAAAGATTTG  749

seq1  GTGTGGAGAAGGCCCTGAGTAAAATGAGCCTTTTTTGGACCAGATGCTAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAGAAGGCCCTGAGTAAAATGAGCCTTTTTTGGACCAGATGCTAT  799

seq1  CCTGAATGTTTTGTGGGGTAAGGTTTTGCTATGCTGCCTAAGCTGCCTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATGTTTTGTGGGGTAAGGTTTTGCTATGCTGCCTAAGCTGCCTTT  849

seq1  CAACTTCTCATTTCAAGAAATCCCCCTGTCTTGTGAATAGCTGAGACCAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCTCATTTCAAGAAATCCCCCTGTCTTGTGAATAGCTGAGACCAC  899

seq1  GGGCATGACTTAAGCTATTTTTACATGGAGTATCTTAATTAATAAATGTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGACTTAAGCTATTTTTACATGGAGTATCTTAATTAATAAATGTT  949

seq1  ACACGGGGAGGTAATTACACTTGATTTTAACCCATTTTACCAATGGGGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGGGAGGTAATTACACTTGATTTTAACCCATTTTACCAATGGGGCA  999

seq1  AACTGTGGAACTGACAGCCTAAGAATTCCCTAAGTGGTTAGCTCTGCCCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGAACTGACAGCCTAAGAATTCCCTAAGTGGTTAGCTCTGCCCA  1049

seq1  CACTCCATATAGGAATTC  1063
      ||||||||||||||||||
seq2  CACTCCATATAGGAATTC  1067