BAC Information

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BAC

Clone NameB6Ng01-189O02
Chromosome7 (Build37)
Map Location 113,333,523 - 113,334,641
singlet/doubletsinglet
Overlap geneGvin1
Upstream geneOlfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, LOC672660
Downstream geneLOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189O02.bB6Ng01-189O02.g
ACCGA013783GA013784
length1,1131,184
definitionB6Ng01-189O02.b B6Ng01-189O02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagccaggttgataatagttactaaaacaaaacaactagttgt
tggggttgggctgtggctctcctatccgtgttccagcctgggaggcatct
tgtagagatttgaagttgtcagaacagccttttagcagaaactcaccaaa
ttcagtttgtagtaaatgccagaaaatcttggagaaccagttcagccttg
gagcaggtggcaggcagtgtaacatcaaaggagagtgatgagaagcagca
cagcaggtggtcctgcctcagtggcaaacgcatcctgcctaggatgaagg
agggtacaactagtagtgtgtctaaatgccaggagagaaatgtaatgtta
tgaaataacctacaaagacatgacaaagccaggcatggtgatgcacactg
gtaattccagcagtcaggaggcaaaagaaaaaaatcatgagtaagagtcc
aatctagacaaaataacaagctccaggccagcatgagctacatagtcaaa
cactgtctgaagaggaaggaaaaagtgatagagcaataggaatagaacca
gtcaacacggtttcacaaaaattaataaggaaagcataatcaacagatga
tatcaattgtttttaaaaacatcaaccaagaaaactcatgtatgttatca
aatactatccttcacattaattcactcaaagcaattgattctttcaaaga
gaaagctttaaaatcaggcaaagtgtcaggcaatggtggtgcacaccttt
agtcccaacactcaggaggcacaagcaaggagatctccaagttcacgacc
aggtctacaaactgaatttcagaaaaagctagggctactcaaagaaacac
tatcttgacaacaaatggaatcaggaaaagtggcaactcaatatagtatc
caacaaagaggtcatgctgagaacactcacaatgaaaggctacacttacg
caaacacacacacatacccacacacaaatttgtatccaaattccacttaa
aaaattacaggggatgaaaagattacagattgaattatgagttatcattt
ttctgccacacagctggaactctagtcaagaccacagaaaaaacctaact
atattctgttcct
gaattcatgaaaatcttaggcaaatggatgtatctggaggagatcatcct
gagtgaggtaaaccaatcacaaaaggacacacttaatatccaaaatatac
aaagaactcaagaatttagactccagagaaacaaataaccctagtaaaat
tggggttcagagctaaacaaagtgttttcaactgaggaatgtcaaatggc
tgagatacacttaaagaaacgttcaatatccttagtcatcaagaaaatgc
aaatcagaaagaccctaagattctacctcacaccagtcagaatggctcag
atcaaaaactcaggtgacagcagattctggtgaggatatggagaaagagg
aacactcctctatttttggagggagttactacaactactctggaaattag
tctggcagttctaaagaaaattgaacatagtactatctgaggatacatca
ataccactcctaggcatatacccagaagatgatccaacttgtaataacaa
cacatgttccaatagcagccttaattataaaagccagaagctggaaacag
atgtcccttaacagaggaatgggtacagatgatgttgtaagtttacacaa
tgggttactactcagctattaaaaataatgacttcatcaaagcaggaaag
tttgaaataccaaagacaaaagtcacagacttttagggaatgctaaagtg
tggattcttcagtgcttcttagaagggggaacaaagtactcatgggagaa
atacaaggacaaagtgtggaggagagaatgaagtaaaggtcatctggaga
ctgccctacctagggatcaagactcttacactattgtggatgcagggaag
tgcttgctgaagggaacctgatatggctgtctcctgagaggctctgccaa
aacctgacaatacagaagtggatgcctgttgccacccattggactgaatg
tggggtccctgatggaggagttgagaaggactgaagagctgagtggtttg
cagccccaagtggggaacagagtgtcaatcgtcagacccttggagcatcc
aggggcttggatccacacagagtacacatttgaggtatctaaggctcttg
cacatatgtgcatgagatggcctgtgacatcatggatgagaagcccttgg
tcctgaagagttttgattccccccgatggtagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113333523_113334641
seq2: B6Ng01-189O02.b_45_1157 (reverse)

seq1  AGGAACAGATTATAGTTA-GTTTTTTCTGT-GTCCTGACCTTAGGAAGTT  48
      ||||||||| |||||||| ||||||||||| ||| ||||  |||  ||||
seq2  AGGAACAGAATATAGTTAGGTTTTTTCTGTGGTCTTGAC--TAG--AGTT  46

seq1  CCAGCTGTGTGGCCAGAAAAATGAATTACTCATATTTCAAATCTGTTAAT  98
      |||||||||||| |||||||||| || ||||||| ||| |||||| ||||
seq2  CCAGCTGTGTGG-CAGAAAAATG-ATAACTCATAATTC-AATCTG-TAAT  92

seq1  CTTTTTCATCCCCTGTAATTTTTTAAGTGG-ATTTGGATACAAATTTGTG  147
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  C-TTTTCATCCCCTGTAATTTTTTAAGTGGAATTTGGATACAAATTTGTG  141

seq1  TGTGGGTATGTGTGTGTGTTTGCGTAAGTGTAGCCTTTCATTGTGAGTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTATGTGTGTGTGTTTGCGTAAGTGTAGCCTTTCATTGTGAGTGT  191

seq1  TCTCAGCATGACCTCTTTTGTTGGATACTATATTGAGTTGCCACTTTTCC  247
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTCAGCATGACCTC-TTTGTTGGATACTATATTGAGTTGCCACTTTTCC  240

seq1  TGATTCCATTTGTTGTCAAGATAGTGTTTCTTTGAGTAGCCCTAGC-TTT  296
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGATTCCATTTGTTGTCAAGATAGTGTTTCTTTGAGTAGCCCTAGCTTTT  290

seq1  TCTGAAATTCAGTTTGTAGACCTGGTCCTGAACTTGGAGATCTCCTTGCT  346
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTGAAATTCAGTTTGTAGACCTGGTCGTGAACTTGGAGATCTCCTTGCT  340

seq1  TGTGCCTCCTGAGTGTTGGGACTAAAGGTGTGCACCACCATTGCCTGACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTCCTGAGTGTTGGGACTAAAGGTGTGCACCACCATTGCCTGACA  390

seq1  CTTTGCCTGATTTTAAAGCTTTCTCTTTGAAAGAATCAATTGCTTTGAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTGATTTTAAAGCTTTCTCTTTGAAAGAATCAATTGCTTTGAGT  440

seq1  GAATTAATGTGAAGGATAGTATTTGATAACATACATGAGTTTTCTTGGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAATGTGAAGGATAGTATTTGATAACATACATGAGTTTTCTTGGTT  490

seq1  GATGTTTTTAAAAACAATTGATATCATCTGTTGATTATGCTTTCCTTATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTAAAAACAATTGATATCATCTGTTGATTATGCTTTCCTTATT  540

seq1  AATTTTTGTGAAACCGTGTTGACTGGTTCTATTCCTATTGCTCTATCACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGTGAAACCGTGTTGACTGGTTCTATTCCTATTGCTCTATCACT  590

seq1  TTTTCCTTCCTCTTCAGACAGTGTTTGACTATGTAGCTCATGCTGGCCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCCTCTTCAGACAGTGTTTGACTATGTAGCTCATGCTGGCCTG  640

seq1  GAGCTTGTTATTTTGTCTAGATTGGACTCTTACTCATGATTTTTTTCTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTTATTTTGTCTAGATTGGACTCTTACTCATGATTTTTTTCTTT  690

seq1  TGCCTCCTGACTGCTGGAATTACCAGTGTGCATCACCATGCCTGGCTTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTGACTGCTGGAATTACCAGTGTGCATCACCATGCCTGGCTTTG  740

seq1  TCATGTCTTTGTAGGTTATTTCATAACATTACATTTCTCTCCTGGCATTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTTTGTAGGTTATTTCATAACATTACATTTCTCTCCTGGCATTT  790

seq1  AGACACACTACTAGTTGTACCCTCCTTCATCCTAGGCAGGATGCGTTTGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACTACTAGTTGTACCCTCCTTCATCCTAGGCAGGATGCGTTTGC  840

seq1  CACTGAGGCAGGACCACCTGCTGTGCTGCTTCTCATCACTCTCCTTTGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGGCAGGACCACCTGCTGTGCTGCTTCTCATCACTCTCCTTTGAT  890

seq1  GTTACACTGCCTGCCACCTGCTCCAAGGCTGAACTGGTTCTCCAAGATTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACTGCCTGCCACCTGCTCCAAGGCTGAACTGGTTCTCCAAGATTT  940

seq1  TCTGGCATTTACTACAAACTGAATTTGGTGAGTTTCTGCTAAAAGGCTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATTTACTACAAACTGAATTTGGTGAGTTTCTGCTAAAAGGCTGT  990

seq1  TCTGACAACTTCAAATCTCTACAAGATGCCTCCCAGGCTGGAACACGGAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAACTTCAAATCTCTACAAGATGCCTCCCAGGCTGGAACACGGAT  1040

seq1  AGGAGAGCCACAGCCCAACCCCAACAACTAGTTGTTTTGTTTTAGTAACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGCCACAGCCCAACCCCAACAACTAGTTGTTTTGTTTTAGTAACT  1090

seq1  ATTATCAACCTGGCTTTGAATTC  1119
      |||||||||||||||||||||||
seq2  ATTATCAACCTGGCTTTGAATTC  1113