BAC Information

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BAC

Clone NameB6Ng01-189O03
Chromosome7 (Build37)
Map Location 135,124,662 - 135,299,074
singlet/doubletdoublet
Overlap geneFus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax
Upstream geneMvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36
Downstream geneItgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189O03.bB6Ng01-189O03.g
ACCGA013785GA013786
length7961,153
definitionB6Ng01-189O03.b B6Ng01-189O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,124,662 - 135,125,601)(135,297,933 - 135,299,074)
sequence
ggaattcaattgtacctcttacaaattgcctttcatttctttagtacatg
tgagaacatgaacttctcttggagaaatgaatgcaaccagtgtaaggcac
ctaagccagatggcccaggagggggaccaggaggctctcatatgggtaag
aagggagcagagctggaactgagagctccagaaagagccccacacttgag
atttgcaaaggtcacgggagggaaggtagaagaattgaagatgataacat
gactttttttctagggggaaactatggagatgatcgacgtggcagaggag
gatatgaccggggcggctaccggggccgaggaggggaccgtgggggcttc
agagggggccggggtggtggggacagaggcggttttggccctggcaagat
ggactccaggtgagtaagtcaaaacaaaagtcaagaaaattggtcagaga
tcatgaggaaatcaggtttccctgggaaagtcagcttagctggttacatt
tttgggaaggaagaagaaaagttcagaacccagtctttgaggctgttttg
ctttaaagtcatttgttgggtagcagagacttgaagggtgtgcatgggta
gggtagttcagtaacacgtaatctaacataactttttctttcaggggcga
gcacagacaggatcgcagggagaggccatattagcctggctcctgaagtt
ctggaactcttcctgtacccagtgttacccttgttattttgtaaacttac
aattcaggatcgctcatggatattttttttttgggggggggtgggg
gaattcaataaaaaacagtccaaggacgttctggaagggcttaaagtcag
actcagaattaaacagaaagtgttcaaagccaaacagcaaaatggaagct
ttcattagctgttcaattctatcaaatgtgaacagaaagtttggatcgcg
gctatctcaacagcacttatttcaaagctaactccaacctttcatcatgg
agctacaggcatggcactgagtggcacctctactccaatcctccgagcag
agctgggatctaaagacgataaccctcttaagagcagagacaaagtaaat
gagataagactgagcctgagaagccccgggctgggagcggagcacgcgcg
gaggccacagccccggaggaaaagaactctctcagcagccagctgccctg
aaggggattcataggtgccggctggttccccgggcaacagcctaaagctc
tggagtaatgatcacaccctagccctgacacctgcccactgaaacctgga
ctctgttcttgtcaatactttgtctgcaagttatggcttggtcttagaca
caaaactatacttaagccaattaggaacaaagccaaattgcattttcctt
aggtctagttagatgagaataaaatctcatgtagtgacttcatcatacaa
tctttaacaaaaactcgtaagtggcattgattattcccctggaaatgaga
gagcggtggtaattcagatgtgcacctctgaaaagattgatcagtttcct
gtaccgttctatccagatagtcttgaacaccatggggagagactggaatg
gcccgccaatctgaaactgtattcgagctttgacaacgttaacagggaag
cttaagaagtcagcaaggccccgagtacaccctcccacggatgaagtcgt
tgaccaggtgggcgctgtatgtagtggcagtaggcaggcgcttaatgggt
cctggaaggtcaaaaaaaaaggaacattacccgaactcatttcagaaaag
gatgggcacccatgccctctgtaatacctctgcaatcccatggcatctga
ccgcccctgaagaccttgataagttgttttgtgacttatcatgatgtttg
gtggtcctgaaggcaagtcttgaacctttccatgaagtgagaaatggctt
ccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135124662_135125601
seq2: B6Ng01-189O03.b_48_842

seq1  GAATTCAATTGTACCTCTTACAAATTGCCTTTCATTTCTTTAGTACATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTGTACCTCTTACAAATTGCCTTTCATTTCTTTAGTACATGT  50

seq1  GAGAACATGAACTTCTCTTGGAGAAATGAATGCAACCAGTGTAAGGCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATGAACTTCTCTTGGAGAAATGAATGCAACCAGTGTAAGGCACC  100

seq1  TAAGCCAGATGGCCCAGGAGGGGGACCAGGAGGCTCTCATATGGGTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAGATGGCCCAGGAGGGGGACCAGGAGGCTCTCATATGGGTAAGA  150

seq1  AGGGAGCAGAGCTGGAACTGAGAGCTCCAGAAAGAGCCCCACACTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCAGAGCTGGAACTGAGAGCTCCAGAAAGAGCCCCACACTTGAGA  200

seq1  TTTGCAAAGGTCACGGGAGGGAAGGTAGAAGAATTGAAGATGATAACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAGGTCACGGGAGGGAAGGTAGAAGAATTGAAGATGATAACATG  250

seq1  ACTTTTTTTCTAGGGGGAAACTATGGAGATGATCGACGTGGCAGAGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTCTAGGGGGAAACTATGGAGATGATCGACGTGGCAGAGGAGG  300

seq1  ATATGACCGGGGCGGCTACCGGGGCCGAGGAGGGGACCGTGGGGGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACCGGGGCGGCTACCGGGGCCGAGGAGGGGACCGTGGGGGCTTCA  350

seq1  GAGGGGGCCGGGGTGGTGGGGACAGAGGCGGTTTTGGCCCTGGCAAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGCCGGGGTGGTGGGGACAGAGGCGGTTTTGGCCCTGGCAAGATG  400

seq1  GACTCCAGGTGAGTAAGTCAAAACAAAAGTCAAGAAAATTGGTCAGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGGTGAGTAAGTCAAAACAAAAGTCAAGAAAATTGGTCAGAGAT  450

seq1  CATGAGGAAATCAGGTTTCCCTGGGAAAGTCAGCTTAGCTGGTTACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGAAATCAGGTTTCCCTGGGAAAGTCAGCTTAGCTGGTTACATTT  500

seq1  TTGGGAAGGAAGAAGAAAAGTTCAGAACCCAGTCTTTGAGGCTGTTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGGAAGAAGAAAAGTTCAGAACCCAGTCTTTGAGGCTGTTTTGC  550

seq1  TTTAAAGTCATTTGTTGGGTAGCAGAGACTTGAAGGGTGTGCATGGGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGTCATTTGTTGGGTAGCAGAGACTTGAAGGGTGTGCATGGGTAG  600

seq1  GGTAGTTCAGTAACACGTAATCTAACATAACTTTTTCTTTCAGGGGCGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTCAGTAACACGTAATCTAACATAACTTTTTCTTTCAGGGGCGAG  650

seq1  CACAGACAGGATCGCAGGGAGAGGCCATATTAGCCTGGCTCCTGAAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAGGATCGCAGGGAGAGGCCATATTAGCCTGGCTCCTGAAGTTC  700

seq1  TGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTAAACTTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTAAACTTACA  750

seq1  ATTCAGGATCGCTCATGGATATTTTTTTTT--GGGGGGGGTGGGGCGGTT  798
      ||||||||||||||||||||||||||||||  |||||||||||||     
seq2  ATTCAGGATCGCTCATGGATATTTTTTTTTTGGGGGGGGGTGGGG-----  795

seq1  GTGTGTGTATGTGTGTGTGTGTGTGTCAGACTACCCTAATTGTAACCATA  848
                                                        
seq2  --------------------------------------------------  795

seq1  TCTCTGGTTCCCATTAAAAAACATCATTTTAGTTAAATTCTGTTTCCCCC  898
                                                        
seq2  --------------------------------------------------  795

seq1  AGTTTACTTTCTGAAGAATGGGTCCATGTTATTAATGTGGGG  940
                                                
seq2  ------------------------------------------  795

seq1: chr7_135297933_135299074
seq2: B6Ng01-189O03.g_63_1215 (reverse)

seq1  CGGAAGCCA-TTCTCACTCCATTCGAAAGGGTTCAGACTTTGCTTCAGGA  49
      ||||||||| |||||||| || | |||||| |  ||||||  ||||||||
seq2  CGGAAGCCATTTCTCACTTCA-TGGAAAGGTTCAAGACTTGCCTTCAGGA  49

seq1  CCA-CAAACATCATGATAAGTTCACAAA--CACTTATC-AGGTCTTCA-G  94
      ||| |||||||||||||||| |||||||   ||||||| ||||||||| |
seq2  CCACCAAACATCATGATAAG-TCACAAAACAACTTATCAAGGTCTTCAGG  98

seq1  GGCGCTCAGATGCCATGGGATTGCAGA-GTATTACAGA-GGCAT-GGTGC  141
      |||| |||||||||||||||||||||| |||||||||| ||||| |||||
seq2  GGCGGTCAGATGCCATGGGATTGCAGAGGTATTACAGAGGGCATGGGTGC  148

seq1  CCATCCTTTTCTGAAATGGGTTC-GGTAATG-TCCTTTTTTTTTGACCTT  189
      |||||||||||||||||| |||| ||||||| ||||||||||||||||||
seq2  CCATCCTTTTCTGAAATGAGTTCGGGTAATGTTCCTTTTTTTTTGACCTT  198

seq1  CCAGGACCCATTAAGCGCCTGCCTACTGCCACTACATACAGCGCCCACCT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCCATTAAGCGCCTGCCTACTGCCACTACATACAGCGCCCACCT  248

seq1  GGTCAACGACTTCATCCGTGG--AGGTGTACTCGGGGCCTTGCTGACTTC  287
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  GGTCAACGACTTCATCCGTGGGAGGGTGTACTCGGGGCCTTGCTGACTTC  298

seq1  TTAAGCTTCCCTGTTAACGTTGTCAAAGCTCGAATACAGTTTCAGATTGG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTTCCCTGTTAACGTTGTCAAAGCTCGAATACAGTTTCAGATTGG  348

seq1  CGGGCCATTCCAGTCTCTCCCCATGGTGTTCAAGACTATCTGGATAGAAC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCATTCCAGTCTCTCCCCATGGTGTTCAAGACTATCTGGATAGAAC  398

seq1  GGTACAGGAAACTGATCAATCTTTTCAGAGGTGCACATCTGAATTACCAC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGGAAACTGATCAATCTTTTCAGAGGTGCACATCTGAATTACCAC  448

seq1  CGCTCTCTCATTTCCAGGGGAATAATCAATGCCACTTACGAGTTTTTGTT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTCTCATTTCCAGGGGAATAATCAATGCCACTTACGAGTTTTTGTT  498

seq1  AAAGATTGTATGATGAAGTCACTACATGAGATTTTATTCTCATCTAACTA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTGTATGATGAAGTCACTACATGAGATTTTATTCTCATCTAACTA  548

seq1  GACCTAAGGAAAATGCAATTTGGCTTTGTTCCTAATTGGCTTAAGTATAG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAGGAAAATGCAATTTGGCTTTGTTCCTAATTGGCTTAAGTATAG  598

seq1  TTTTGTGTCTAAGACCAAGCCATAACTTGCAGACAAAGTATTGACAAGAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTCTAAGACCAAGCCATAACTTGCAGACAAAGTATTGACAAGAA  648

seq1  CAGAGTCCAGGTTTCAGTGGGCAGGTGTCAGGGCTAGGGTGTGATCATTA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCCAGGTTTCAGTGGGCAGGTGTCAGGGCTAGGGTGTGATCATTA  698

seq1  CTCCAGAGCTTTAGGCTGTTGCCCGGGGAACCAGCCGGCACCTATGAATC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGCTTTAGGCTGTTGCCCGGGGAACCAGCCGGCACCTATGAATC  748

seq1  CCCTTCAGGGCAGCTGGCTGCTGAGAGAGTTCTTTTCCTCCGGGGCTGTG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAGGGCAGCTGGCTGCTGAGAGAGTTCTTTTCCTCCGGGGCTGTG  798

seq1  GCCTCCGCGCGTGCTCCGCTCCCAGCCCGGGGCTTCTCAGGCTCAGTCTT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCGCGCGTGCTCCGCTCCCAGCCCGGGGCTTCTCAGGCTCAGTCTT  848

seq1  ATCTCATTTACTTTGTCTCTGCTCTTAAGAGGGTTATCGTCTTTAGATCC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTTACTTTGTCTCTGCTCTTAAGAGGGTTATCGTCTTTAGATCC  898

seq1  CAGCTCTGCTCGGAGGATTGGAGTAGAGGTGCCACTCAGTGCCATGCCTG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGCTCGGAGGATTGGAGTAGAGGTGCCACTCAGTGCCATGCCTG  948

seq1  TAGCTCCATGATGAAAGGTTGGAGTTAGCTTTGAAATAAGTGCTGTTGAG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCATGATGAAAGGTTGGAGTTAGCTTTGAAATAAGTGCTGTTGAG  998

seq1  ATAGCCGCGATCCAAACTTTCTGTTCACATTTGATAGAATTGAACAGCTA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCGCGATCCAAACTTTCTGTTCACATTTGATAGAATTGAACAGCTA  1048

seq1  ATGAAAGCTTCCATTTTGCTGTTTGGCTTTGAACACTTTCTGTTTAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCTTCCATTTTGCTGTTTGGCTTTGAACACTTTCTGTTTAATTC  1098

seq1  TGAGTCTGACTTTAAGCCCTTCCAGAACGTCCTTGGACTGTTTTTTATTG  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGACTTTAAGCCCTTCCAGAACGTCCTTGGACTGTTTTTTATTG  1148

seq1  AATTC  1142
      |||||
seq2  AATTC  1153