BAC Information

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BAC

Clone NameB6Ng01-190C07
Chromosome7 (Build37)
Map Location 88,855,881 - 88,856,706
singlet/doubletsinglet
Overlap genenone
Upstream geneIqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2
Downstream gene2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3, Adamtsl3, 1700129I04Rik, Eftud1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190C07.bB6Ng01-190C07.g
ACCGA013975GA013976
length1,0061,220
definitionB6Ng01-190C07.b B6Ng01-190C07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gtaatcccagcactaaggaggctaaggaagatcactacaagtccaaggtc
agtctgggctatgctgtgagatgttctccctaaacaaacagaaacaaacc
aacctgacttggtatagacggtgtcaaaggatacagatgttccaggcatg
gtggcatgtgcttgcaatcccagccactcagaggcagaggcaggaagatc
caggccaatcagggctgaagagtgagactttcactcctgccgccccccaa
aaggatatacaacaatggtgagatgtataaaataaatatatgtaggatgg
tttaaactaccatcaccatctcctatgctccacataaggataggcagaac
ttagtgacttgattccaaagaataagatatggaaagtggaacagttcctc
gatagtgaaagcccctggcagctgctgtcttaaccacaagactagccaag
gttactatcaccagtgatgtctcgtggacgttatatacttcttttgagag
ggtatgacaaagagggccttcacttatgtggtatttccctccgaatccat
aacaccagtctgttcatgagaagtactacaggcagtgttaatgtgagaaa
ccgtttgtaaatgcctggccaattctcaaagctgtcatggtcatcatgta
caagagaagatgggagagctaccaagaccagaggagactatggaatgtgg
caactaccaatatggtatctagattagatcctgaaaggagaaaacctgat
taaatcttgagttgtccagatgactcattgggtagaggtggttgctaaac
agacctggaaactgacattcagtctccaaaaacacgtaaacaggagagaa
ctcttactctacacatgtgttctgacctcccatgtacaccaaggcatgca
agcctccctgcccccacaaaaataaatacaacttaaaaaaaaatctaaaa
cttacaaatctagagtttgttaataatgtaaccctgttgatcccttactt
aaataa
gaattctggacttgactatttcttcaccaactacattgtccatcctggct
caggttgtcagtattagtttacttcagtagccttctgtcacttctgcctt
acatccttctccctaacctttacttggtttccaaaaacaccagccaaaat
gatgctgttgacccatcactttgcagtgatcgccaggaccctaaatagtc
tgtgttgctaacctgttacctctccgtccttatcccacactggtctactg
ttactcatttcactccagctcccctggcctcttctgtgtctctcagacat
gttattctttcccaggtacagcacagatggttccttcaccctcttgtaga
ggtttgatctgtttctgtgtattgtaatgctaagtgcaagattgggataa
ggggcaaggcctgtcccagagactagagaatctgcccttagactcaagag
aagctatgtgaccatgcctccaggttatttctcattggtgaataaagatg
cctacagcctgtaactggacagaattgagatagacagggcttggtgttcc
gaaatgtgagtgtggagagaagaaggtggagagaggagaaagactctgag
ggttaggagtcaagaaagtatgactatgaggactagccaaggagtaactt
gaggtcatctatagaaaatagattttagtagcatagagcgtaattatctg
cccagctctagtactgattaaggcttattgtaaataataaaagttgtgtg
tcttttaaccaaaaatggaatggtcaaagacgggataaaaaaaaatcccg
gattgggattaaatcttttctacaactccttttcttagatgtttccttcc
tggtgatgcctcacccagtctaaaattatatatatatatatgtagctaaa
attataaaggtcatgcctagcctaaccgtctgtgatggctagtttaattg
tcagtttgacccaatccagaatcacacagtaagtttcatgagaaattatc
tagaccgagttggcttatgggtatgtctgtgtgggcatttcttaattgag
tgagatagaaagacccacccaaaatgacgcaacattcctagatgaattct
agggtatggattggtggtggagttgagcgtcattctggtacctctctgcc
ctttgactggattgaacgggcgttgacgtgctctcatactctgtcgtacc
actgaaactctcacatcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88855881_88856706
seq2: B6Ng01-190C07.b_58_883

seq1  GTAATCCCAGCACTAAGGAGGCTAAGGAAGATCACTACAAGTCCAAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCCAGCACTAAGGAGGCTAAGGAAGATCACTACAAGTCCAAGGTC  50

seq1  AGTCTGGGCTATGCTGTGAGATGTTCTCCCTAAACAAACAGAAACAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGGCTATGCTGTGAGATGTTCTCCCTAAACAAACAGAAACAAACC  100

seq1  AACCTGACTTGGTATAGACGGTGTCAAAGGATACAGATGTTCCAGGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGACTTGGTATAGACGGTGTCAAAGGATACAGATGTTCCAGGCATG  150

seq1  GTGGCATGTGCTTGCAATCCCAGCCACTCAGAGGCAGAGGCAGGAAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATGTGCTTGCAATCCCAGCCACTCAGAGGCAGAGGCAGGAAGATC  200

seq1  CAGGCCAATCAGGGCTGAAGAGTGAGACTTTCACTCCTGCCGCCCCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAATCAGGGCTGAAGAGTGAGACTTTCACTCCTGCCGCCCCCCAA  250

seq1  AAGGATATACAACAATGGTGAGATGTATAAAATAAATATATGTAGGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATACAACAATGGTGAGATGTATAAAATAAATATATGTAGGATGG  300

seq1  TTTAAACTACCATCACCATCTCCTATGCTCCACATAAGGATAGGCAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTACCATCACCATCTCCTATGCTCCACATAAGGATAGGCAGAAC  350

seq1  TTAGTGACTTGATTCCAAAGAATAAGATATGGAAAGTGGAACAGTTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGACTTGATTCCAAAGAATAAGATATGGAAAGTGGAACAGTTCCTC  400

seq1  GATAGTGAAAGCCCCTGGCAGCTGCTGTCTTAACCACAAGACTAGCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGAAAGCCCCTGGCAGCTGCTGTCTTAACCACAAGACTAGCCAAG  450

seq1  GTTACTATCACCAGTGATGTCTCGTGGACGTTATATACTTCTTTTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTATCACCAGTGATGTCTCGTGGACGTTATATACTTCTTTTGAGAG  500

seq1  GGTATGACAAAGAGGGCCTTCACTTATGTGGTATTTCCCTCCGAATCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGACAAAGAGGGCCTTCACTTATGTGGTATTTCCCTCCGAATCCAT  550

seq1  AACACCAGTCTGTTCATGAGAAGTACTACAGGCAGTGTTAATGTGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAGTCTGTTCATGAGAAGTACTACAGGCAGTGTTAATGTGAGAAA  600

seq1  CCGTTTGTAAATGCCTGGCCAATTCTCAAAGCTGTCATGGTCATCATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTGTAAATGCCTGGCCAATTCTCAAAGCTGTCATGGTCATCATGTA  650

seq1  CAAGAGAAGATGGGAGAGCTACCAAGACCAGAGGAGACTATGGAATGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAGATGGGAGAGCTACCAAGACCAGAGGAGACTATGGAATGTGG  700

seq1  CAACTACCAATATGGTATCTAGATTAGATCCTGAAAGGAGAAAACCTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACCAATATGGTATCTAGATTAGATCCTGAAAGGAGAAAACCTGAT  750

seq1  TAAATCTTGAGTTGTCCAGATGACTCATTGGGTAGAGGTGGTTGCTAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTGAGTTGTCCAGATGACTCATTGGGTAGAGGTGGTTGCTAAAC  800

seq1  AGACCTGGAAACTGACATTCAGTCTC  826
      ||||||||||||||||||||||||||
seq2  AGACCTGGAAACTGACATTCAGTCTC  826