BAC Information

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BAC

Clone NameB6Ng01-190C20
Chromosome7 (Build37)
Map Location 33,527,952 - 33,529,088
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499
Downstream geneLOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190C20.bB6Ng01-190C20.g
ACCGA013997GA013998
length1,1971,137
definitionB6Ng01-190C20.b B6Ng01-190C20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgatgatggtagaggacatcagttgggactttcataactcact
taaagaaatacaagagaacactgctgaagagttacaagtccttaaagaaa
aacaggaaaacacaaccaaacaggtagaagtccttagagaaaatctgaaa
acacatccaaagaggtgatggaaatgaacaaaaccataatagacataaaa
agggcagtagacaaatgcaaagtgaggcaatactggagatagaaatccta
ggaaagaaatatggaaacatagatgtgagcatcagcaacagaatacaagc
gatggacgagagaatctaaggtgcagaagattccacagagaacgtcagta
aaacaagcaaagaaaaatgcaaaatgcaagaagatcctaactcaaaacat
ccaagaaggccaggacacaatgagaagaccaaacctacagatactaggag
tagatgagaatgaagattttcaacttaaagggccagcaaatatcttcaac
aaaattatagaagaaaacttcccaaacctaaagaaagagatggccatgaa
catacaagaagcctacaaaactccaaatagactggatcagaaaagaaatt
gctcctgacacataataatcagaacaacaaatgtactaaataaagataga
atattaaaagaggtaagggggaaaaggtcaagtaacatataaaggcagcc
ctaacagaattacaccagacttttcaccagagactatgaaagccagaagt
tcctggacagttgttatacagactctaagagaacacaaatgccagcccaa
gcaactatacccagcccaccacacaattaccatagctggagaaaccaaag
tattccacgaaaaaaccaaattcacacattatctctccatgaatttagcc
cttcaaagataataacagaaaaaaaaaaaaacaaacaacaacaacaaaaa
aaacatacaggatggaaaccatgccctagaaaaagcaagaaagtaatcat
caaaaaaccaaaaaggagactgccaaaagaacagaatgccaactctaaca
acaaaaattatagggagcacaattacttttcattatattctctaggtatc
aatgcactcaatcccatgaagactgactacacactggctactaacaggaa
cgacatctgctgctacaggcaatccatctctaggcaaaagagaacag
gaattctctctgttgaccaggctgtactccagctcagagatttttctgct
tctgccccccaagtgctgcaattaaaggcctgctccaccactgactggca
tggtagttgttatttaatgtataaaaccaagaaatcactgtagtcctgat
gttgttcaatttcactgctcttaatgtgaccccttatagttacccctttc
ctaactgcccatcagggtgttcattgatttgttttcccctttcagaagac
ctctgtcattagttcaaggactttttgctgccttcaagttgggactgttg
taaataaagctgttctgtgcattcattcatttgttcctctcttctgtgtg
tcaatattcaggcatcaaaggcctgcatgcctcatttgtacatgtgagag
tttatcttctagatatgatggaataagaaagtcaaaaaggaaggtacata
ctacctacatgtatcaagagaaggcacatatgtcatgccacacaatgcta
tgtcagacagattattgttaagtgggagacagaaaaacatgaggaagagg
cctcaccctttcttgggaactccttgggcacaggaaactgttcttggatt
tactggtttgaataagctcaacagttttcagatttgggaccaggcttggt
cctgaggtggtattttggaaaaatgctggatagggtgttaaaagtgaaga
tgttctgttttctcagaatcattgctttgtctgtgagagctttgtccctg
ggaaggccatttggccttccacagaacaagtcaggcttctttaggaagcc
ctaggcgttgtcatatcacatcaggaaacagttgaacagagcaatggctc
tatgcctgtcagtcttaaacactgaccaatgtatcttgtttgtataactt
tcagtccctcagcctgctcactagcacttgctcttctttgatgtgtcttc
tcaattttggccagtaatatacagaatagagttgtgttactatgttgcat
gccaatttaacaatggagttcatcattttaattacaacagcttccagtcc
tcctcctcccttttacctgttgggctgcctgtttgtggttgagttataag
aagagtggcatgccatatggcccacgcattgcatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33527952_33529088
seq2: B6Ng01-190C20.g_66_1202

seq1  GAATTCTCTCTGTTGACCAGGCTGTACTCCAGCTCAGAGATTTTTCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTTGACCAGGCTGTACTCCAGCTCAGAGATTTTTCTGCT  50

seq1  TCTGCCCCCCAAGTGCTGCAATTAAAGGCCTGCTCCACCACTGACTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCCCCAAGTGCTGCAATTAAAGGCCTGCTCCACCACTGACTGGCA  100

seq1  TGGTAGTTGTTATTTAATGTATAAAACCAAGAAATCACTGTAGTCCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTTGTTATTTAATGTATAAAACCAAGAAATCACTGTAGTCCTGAT  150

seq1  GTTGTTCAATTTCACTGCTCTTAATGTGACCCCTTATAGTTACCCCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCAATTTCACTGCTCTTAATGTGACCCCTTATAGTTACCCCTTTC  200

seq1  CTAACTGCCCATCAGGGTGTTCATTGATTTGTTTTCCCCTTTCAGAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGCCCATCAGGGTGTTCATTGATTTGTTTTCCCCTTTCAGAAGAC  250

seq1  CTCTGTCATTAGTTCAAGGACTTTTTGCTGCCTTCAAGTTGGGACTGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCATTAGTTCAAGGACTTTTTGCTGCCTTCAAGTTGGGACTGTTG  300

seq1  TAAATAAAGCTGTTCTGTGCATTCATTCATTTGTTCCTCTCTTCTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAGCTGTTCTGTGCATTCATTCATTTGTTCCTCTCTTCTGTGTG  350

seq1  TCAATATTCAGGCATCAAAGGCCTGCATGCCTCATTTGTACATGTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATTCAGGCATCAAAGGCCTGCATGCCTCATTTGTACATGTGAGAG  400

seq1  TTTATCTTCTAGATATGATGGAATAAGAAAGTCAAAAAGGAAGGTACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTCTAGATATGATGGAATAAGAAAGTCAAAAAGGAAGGTACATA  450

seq1  CTACCTACATGTATCAAGAGAAGGCACATATGTCATGCCACACAATGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTACATGTATCAAGAGAAGGCACATATGTCATGCCACACAATGCTA  500

seq1  TGTCAGACAGATTATTGTTAAGTGGGAGACAGAAAAACATGAGGAAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGACAGATTATTGTTAAGTGGGAGACAGAAAAACATGAGGAAGAGG  550

seq1  CCTCACCCTTTCTTGGGAACTCCTTGGGCACAGGAAACTGTTCTTGGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCTTTCTTGGGAACTCCTTGGGCACAGGAAACTGTTCTTGGATT  600

seq1  TACTGGTTTGAATAAGCTCAACAGTTTTCAGATTTGGGACCAGGCTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTTGAATAAGCTCAACAGTTTTCAGATTTGGGACCAGGCTTGGT  650

seq1  CCTGAGGTGGTATTTTGGAAAAATGCTGGATAGGGTGTTAAAAGTGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGTGGTATTTTGGAAAAATGCTGGATAGGGTGTTAAAAGTGAAGA  700

seq1  TGTTCTGTTTTCTCAGAATCATTGCTTTGTCTGTGAGAGCTTTGTCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTTTCTCAGAATCATTGCTTTGTCTGTGAGAGCTTTGTCCCTG  750

seq1  GGAAGGCCATTTGGCCTTCCACAGAACAAGTCAGGCTTCTTTAGGAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCCATTTGGCCTTCCACAGAACAAGTCAGGCTTCTTTAGGAAGCC  800

seq1  CTAGGCGTTGTCATATCACATCAGGAAACAGTTGAACAGAGCAATGGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCGTTGTCATATCACATCAGGAAACAGTTGAACAGAGCAATGGCTC  850

seq1  TATGCCTGTCAGTCTTAAACACTGACCAATGTATCTTGTTTGTATAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTGTCAGTCTTAAACACTGACCAATGTATCTTGTTTGTATAACTT  900

seq1  TCAGTCCCTCAGCCTGCTCACTAGCACTTGCTC-TCTTTGATGTGTCTTC  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCAGTCCCTCAGCCTGCTCACTAGCACTTGCTCTTCTTTGATGTGTCTTC  950

seq1  TCAATTTTGGCCAGTAATATACAGAATAAGAGTTGTGTTACTATGTTGCA  999
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCAATTTTGGCCAGTAATATACAGAAT-AGAGTTGTGTTACTATGTTGCA  999

seq1  TGCCAATTTAACAAATGGAGTTCATCATTTTAATTTACACAGCTTTCCAG  1049
      |||||||||||| ||||||||||||||||||||||   ||||| ||||||
seq2  TGCCAATTTAAC-AATGGAGTTCATCATTTTAATTACAACAGC-TTCCAG  1047

seq1  TCCTC--TCTCCCTTTTACTTGTTGGGTTGCTGTTTTGTGTTTGAGTTTA  1097
      |||||   ||||||||||| ||||||| |||   |||||| ||||| |||
seq2  TCCTCCTCCTCCCTTTTACCTGTTGGGCTGCCTGTTTGTGGTTGAG-TTA  1096

seq1  TAAGAAAGAGTGGGCATG-CATATGGCACA-GCA-TGCATGTA  1137
      |||| |||||| |||||| |||||||| || ||| ||||||||
seq2  TAAG-AAGAGT-GGCATGCCATATGGCCCACGCATTGCATGTA  1137