MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-190L04
Chromosome	7 (Build37)
Map Location	56,294,973 - 56,469,720
singlet/doublet	doublet
Overlap gene	9130015G15Rik
Upstream gene	Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465
Downstream gene	5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5, Nell1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mrgprb7-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404252 MGI:3033123
definition	gene_synonym : MrgB7 note : MAS-related GPR, member B7, pseudogene pseudo : _no_value

name	Mrgprb12-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404264 MGI:3033192
definition	gene_synonym : MrgB12 note : MAS-related GPR, member B12, pseudogene pseudo : _no_value

name	EG270335 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270335 MGI:3644283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 59 ESTs, 1 Protein

name	Mrgprb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404239 MGI:3033121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233230 MGI:3033119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620137 MGI:3033193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins

name	Mrgprb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404240 MGI:3033134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233231 MGI:3033115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243978 MGI:3588270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243979 MGI:2441674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb9-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404253 MGI:3033133
definition	gene_synonym : MrgB9 note : MAS-related GPR, member B9, pseudogene pseudo : _no_value

name	Mrgprb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404238 MGI:3033117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639116 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639116 MGI:3646194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 38 Proteins

name	Zdhhc13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243983 MGI:1919227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csrp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13009 MGI:1330824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E2f8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108961 MGI:1922038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040465 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	9130015G15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74567 MGI:1921817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	5330421F07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78286 MGI:1925536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dbx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13172 MGI:94867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htatip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53415 MGI:1859271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prmt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71974 MGI:1919224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104245 MGI:105090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nell1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338352 MGI:2443902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG270335 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257319 GeneID:270335 MGI:3644283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 59 ESTs, 1 Protein product : predicted gene, EG270335, transcript variant 1 transcript_id : XM_194527.7

name	Mrgprb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46430531 GeneID:404239 MGI:3033121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B5 transcript_id : NM_207538.1

name	Mrgprb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45429987 GeneID:233230 MGI:3033119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B4 transcript_id : NM_205795.1

name	Mrgprb13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82906020 GeneID:620137 MGI:3033193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins product : MAS-related GPR, member B13 transcript_id : XM_884524.1

name	Mrgprb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46430533 GeneID:404240 MGI:3033134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B8 transcript_id : NM_207539.1

name	Mrgprb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356046 GeneID:233231 MGI:3033115
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B1 transcript_id : NM_205810.3

name	Mrgprx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802509 GeneID:243978 MGI:3588270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member X2 transcript_id : NM_001034868.2

name	Mrgprb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801044 GeneID:243979 MGI:2441674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B2 transcript_id : NM_175531.3

name	Mrgprb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46430529 GeneID:404238 MGI:3033117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B3 transcript_id : NM_207537.1

name	EG639116 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257275 GeneID:639116 MGI:3646194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 38 Proteins product : predicted gene, EG639116 transcript_id : XM_001474703.1

name	Zdhhc13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354488 GeneID:243983 MGI:1919227
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 13 transcript_id : NM_028031.2

name	Csrp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476047 GeneID:13009 MGI:1330824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine and glycine-rich protein 3 transcript_id : NM_013808.3

name	E2f8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380194 GeneID:108961 MGI:1922038
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E2F transcription factor 8 transcript_id : NM_001013368.4

name	LOC100040465 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257277 GeneID:100040465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100040465 transcript_id : XM_001474722.1

name	9130015G15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257320 GeneID:74567 MGI:1921817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 9130015G15 gene transcript_id : XM_001477673.1

name	5330421F07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341493 GeneID:78286 MGI:1925536
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5330421F07 gene transcript_id : NM_175272.2

name	Dbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52421337 GeneID:13172 MGI:94867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developing brain homeobox 1 transcript_id : NM_001005232.1

name	Htatip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475634 GeneID:53415 MGI:1859271
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HIV-1 tat interactive protein 2, homolog (human) transcript_id : NM_016865.2

name	Prmt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347894 GeneID:71974 MGI:1919224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein arginine N-methyltransferase 3 transcript_id : NM_133740.2

name	Slc6a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26080427 GeneID:104245 MGI:105090
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, glycine), member 5 transcript_id : NM_148931.2

name	Nell1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130973 GeneID:338352 MGI:2443902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NEL-like 1 (chicken) transcript_id : NM_001037906.2

name	EG270335 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82906029 GeneID:270335 MGI:3644283
definition	codon_start : 1 product : similar to LOC635138 protein isoform 1 protein_id : XP_194527.5

name	Mrgprb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430532 CCDS:CCDS21300.1 GeneID:404239 MGI:3033121
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS-related GPR, member B5 protein_id : NP_997421.1

name	Mrgprb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45429988 CCDS:CCDS21301.1 GeneID:233230 MGI:3033119
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : MrgB4 G protein-coupled receptor product : MAS-related GPR, member B4 protein_id : NP_991364.1

name	Mrgprb13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82906021 GeneID:620137 MGI:3033193
definition	codon_start : 1 product : similar to MRGB8 protein_id : XP_889617.1

name	Mrgprb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430534 CCDS:CCDS21302.1 GeneID:404240 MGI:3033134
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS-related GPR, member B8 protein_id : NP_997422.1

name	Mrgprb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370266 GeneID:233231 MGI:3033115
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : MrgB1 G protein-coupled receptor product : MAS-related GPR, member B1 protein_id : NP_991379.2

name	Mrgprx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781696 GeneID:243978 MGI:3588270
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : MAS-related GPR, member B10 protein_id : NP_001030040.1

name	Mrgprb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425306 CCDS:CCDS21303.1 GeneID:243979 MGI:2441674
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : MAS-related GPR, member B2 protein_id : NP_780740.1

name	Mrgprb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430530 CCDS:CCDS21304.1 GeneID:404238 MGI:3033117
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS-related GPR, member B3 protein_id : NP_997420.1

name	EG639116 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257276 GeneID:639116 MGI:3646194
definition	codon_start : 1 product : similar to MrgB2 G protein-coupled receptor protein_id : XP_001474753.1

name	Zdhhc13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229145 GeneID:243983 MGI:1919227
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : HIP14-related protein product : zinc finger, DHHC domain containing 13 protein_id : NP_082307.1

name	Csrp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304987 CCDS:CCDS21305.1 GeneID:13009 MGI:1330824
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IGI]; GO:0002026 - cardiac inotropy [Evidence IGI]; GO:0048738 - cardiac muscle development [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007519 - striated muscle development [Evidence IEA] codon_start : 1 note : cysteine-rich protein 3; muscle LIM protein; cardiac LIM protein product : cysteine and glycine-rich protein 3 protein_id : NP_038836.1

name	E2f8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67972650 GeneID:108961 MGI:1922038
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : E2f family member 8 protein_id : NP_001013386.2

name	LOC100040465 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257278 GeneID:100040465
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474772.1

name	9130015G15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257321 GeneID:74567 MGI:1921817
definition	codon_start : 1 product : hypothetical protein LOC74567 protein_id : XP_001477723.1

name	5330421F07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424928 GeneID:78286 MGI:1925536
definition	codon_start : 1 product : hypothetical protein LOC78286 protein_id : NP_780481.1

name	Dbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52421338 CCDS:CCDS21306.1 GeneID:13172 MGI:94867
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Mmox C product : developing brain homeobox 1 protein_id : NP_001005232.1

name	Htatip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15723368 GeneID:53415 MGI:1859271
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005635 - nuclear envelope [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0051170 - nuclear import [Evidence ISS]; GO:0043068 - positive regulation of programmed cell death [Evidence ISS]; GO:0046022 - positive regulation of transcription from RNA polymerase II promoter, mitotic [Evidence ISS]; GO:0046777 - protein amino acid autophosphorylation [Evidence ISS]; GO:0045765 - regulation of angiogenesis [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence ISS] codon_start : 1 note : tat-interacting protein 30 kDa; HIV-1 tat interactive protein 2, 30 kDa homolog product : HIV-1 tat interactive protein 2, homolog protein_id : NP_058561.1

name	Prmt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789323 CCDS:CCDS21307.1 GeneID:71974 MGI:1919224
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006479 - protein amino acid methylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : protein arginine methyltransferase 3; heterogeneous nuclear ribonucleoprotein methyltransferase-like 3 product : protein arginine N-methyltransferase 3 protein_id : NP_598501.1

name	Slc6a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507331 CCDS:CCDS21308.1 GeneID:104245 MGI:105090
definition	GO_component : GO:0005624 - membrane fraction [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0007269 - neurotransmitter secretion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : glycine transporter 2 product : solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein_id : NP_683733.1

name	Nell1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776571 CCDS:CCDS21309.1 GeneID:338352 MGI:2443902
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : protein kinase C-binding protein NELL1 protein_id : NP_001032995.1

clone name	MSMg01-472D17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-408F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-276D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441K19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-362E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-412I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-190L04.b	B6Ng01-190L04.g
ACC	GA014390	GA014391
length	1,155	1,049
definition	B6Ng01-190L04.b	B6Ng01-190L04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(56,294,973 - 56,296,123)	(56,468,666 - 56,469,720)
sequence	gaattcttggaatggtgaggagccatagcaaaaatctaggcctggcctgc gtctaagacttgaggcaatgacacccaggtagttaagtcattctgggaga aaagacaccgtccacgaatgcaggataggtcaaaatcaggtaaaaaaaaa ttgtgtagagaaggctctgagtaagcatccccagtgtggtgcaaagttct gagcctagtgtggttgggacagagagtagaggacaaggggcatagaggaa agagaagagagggccaagtcatagctcaggctgatcatctagggacaaca atatagttacagtcattcattctttcagtggacattcatttggcaccagg aatgctggaggtactgactactaggtgcttcgtatgtataataagcaggt tatagccctgggccttgagatccacacagtcagatggaggagaaagtcct aaaaggataatcagaggtgagagaggaagagaacacagagagtctgtctt gctaggcttcatcctgggggtccagccttcaagttcatgggagaaagcag atagccaatgaacagcaggtgactgacagcatgaatcaagagaatgtgcc tcactttccccattggccagctatcccagccatttcccttagtctggatt acagagctctctgaaaacatccctgtctcatcacaaagcaagcgaatctt ctgacagggtgtcctggaaactggtatgggacagatgcgatttgaccttg ctgtcacagagcttgcagcataatgtggacgacaggcattaaataatgag ccacacaaataattatgtgtcgtaatttaaaatgatagcatgcaatacaa gatgtgtgagatgatggcaggggacaggaaagggacccaggaaggctttg gtgggaaatcggatatctgaacgaggagcagcacgggagggtgggggcaa acatgacacacggagaaggatggctagggatattcagagaaagggtagct acacaagctacacagggctctgagatcagcgtggagcactgttcaagcat ggctgggccacagtagatactggaagaaaaggcttagaagggaaggtcca gatcctgaaggtgctgcactttaaggtgtcatctcccggaccaagagaaa ttggg	gaattccattgctagctccagtcagacactggtagctgggcagaaggtgg aagcaggccagaagccatggatataaaacaatccatgaagaccaggtcgg tccatcctgactcccgccattgtgcacacagaggtggacactcattggat ttgaagatccttgggttcataggtcagctctactagtcagaccgggtgtc tccttactgttcaaaactcagtttccctctatgagacaatgaagctgaat aactgctgtgcaaatgagggtgggcatgaatgatgcttgagttcctacta tggtatcattacttgacagtgagccctagccatgggtcatcccaagagaa cctcgtctctatgtatggcattaccccatgtgtgttcaagtcctgggcct gtctctcattattaggaagttagctaagtactaccagtcacaactaactc tcattcatttagtaatttaatggaaagtgcttggcactgtacctggctca tagtaagtgctcaataaagattggctgttgctgacagaactaagttattt agcaacattcctaacatgcggctttgagaaacctaccattgccttttggg ggtgacaggtggacaggggagctgggacacccacctttctggcaggtatg ctcattttggatctaaggagccaaactttatttatgtttattaattccct atactggaaagcctacctagccagttgctttatagacacaacaattatct ggagtaagcattattatcccgtttattgaagagaaattaaagttcagaaa ggagaagtgagtagtgagggaagagagcagtaagggaaacaaacaggatt ctaactcaagtcagctttatcctggcaagctgactctgaccggtaagggg gctctatgcctctctcctatgtacaaggttatggagggggtgcctggcat ttcctagcatttattcagcttctgttagcctgcctaggtagttgatcttt gaaattccaaacactggaagctaggaaaaaattaaagctccaaacaata
quality values	Open. Hide. 58 38 19 25 58 58 58 58 58 44 45 42 41 62 47 42 62 62 54 62 62 62 62 47 42 62 62 62 49 62 62 62 56 44 44 62 56 45 46 62 56 49 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 59 62 59 62 62 62 62 62 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 47 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 52 58 58 58 58 58 54 58 58 58 58 54 42 58 58 58 54 58 54 52 58 42 58 58 58 45 31 58 58 58 58 58 58 58 58 58 58 39 58 54 58 49 42 58 58 58 52 54 54 54 58 58 58 58 58 58 58 52 58 58 58 52 58 58 48 58 53 58 58 58 58 51 50 51 58 58 45 41 54 47 43 40 58 58 58 53 50 54 50 52 58 51 46 51 46 58 54 41 40 58 49 37 58 58 50 50 58 58 58 41 51 49 49 51 51 58 58 39 33 51 50 53 46 53 58 46 54 58 38 46 58 53 49 51 58 58 42 50 36 58 51 58 58 58 58 51 53 54 50 40 50 49 28 50 44 43 58 46 52 46 29 44 58 44 58 50 40 53 53 50 52 53 54 54 37 30 29 49 58 50 54 42 39 51 52 58 25 51 54 40 50 53 53 54 37 40 50 44 49 42 22 24 37 39 42 37 49 51 32 45 32 54 54 51 42 54 40 42 50 49 53 52 51 32 38 21 44 29 45 46 26 40 53 53 42 32 43 32 51 37 33 30 53 37 51 21 49 42 41 37 32 35 30 32 35 54 35 26 33 45 29 54 37 35 29 33 35 34 34 26 45 35 16 33 31 52 32 49 19 33 30 38 31 32 31 37 53 32 53 32 32 36 26 31 29 22 40 33 25 49 46 32 28 31 36 23 31 31 41 29 30 32 35 31 25 31 31 31 14 32 31 34 36 38 35 32 30 31 42 20 32 29 38 43 31 32 41 29 34 18 48 46 31 22 21 14 20 31 18 46 13 29 46 19 15 14 46 46 25 31 31 23 9 25 22 17 31 47 46 37 39 21 31 46 36 37 46 22 25 31 6 6 29 32 22 29 25 23 27 26 27 28 22 39 14 27 31 14 30 26 24 42 31 28 11 46 11 20 24 36 28 18 28 41 44 41 32 19 11 33 31 22 22 21 20 31 17 15 29 17 30 18 18 32 20 24 17 5 6 22 9 14 30 27 38 26 10 48 9 14 17 21 22 28 18 17 11 8 4 8 40 16 12 34 19 21 30 21 34 33 17 23 7 11 6 5 29 20 32 27 22 11 26 17 7 31 16 23 27 11 7 11 34 14 24 24 16 21 7 8 8 8 28 13 28 12 14 6 6 9 6 9 8 27 25 19 24 28 20 13 24 21 16 18 11 30 19 9 9 3 4 6 13 7 10 9 16 7 4 3 19 16 5 5 4 4 19 47 40 15 10 18 13 22 9 8 8 6 5 6 28 15 6 14 6 5 7 6 15 7 9 18 7 8 15 18 12 7 6 9 8 10 8 15 3 6 13 5 12 19 27 21 11 5 3 4 4 6 16 6 5 4 6 6 6 4 4 5 4 6 7 5 21 23 9 22 7 17 17 10 9 10 7 23 9	Open. Hide. 62 41 62 47 62 62 39 39 62 62 62 38 44 22 27 32 44 59 28 26 44 59 59 59 62 59 62 62 59 62 59 54 59 62 62 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 56 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 59 62 54 62 62 62 62 62 62 59 59 62 62 62 62 59 59 59 62 62 62 62 62 62 59 59 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 54 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 62 62 54 54 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 46 62 62 54 62 62 62 62 62 62 62 54 62 62 52 42 52 62 62 62 62 49 62 62 62 62 62 42 62 48 62 62 54 54 62 62 62 54 62 58 54 54 30 43 52 52 54 58 58 58 58 58 58 58 58 54 58 50 54 52 52 39 52 54 45 40 40 34 54 58 58 52 54 54 58 58 58 58 58 58 58 52 52 54 54 33 52 43 36 22 54 54 42 42 35 40 54 52 52 54 27 52 54 52 58 52 54 42 42 41 52 52 26 41 41 54 54 52 50 52 58 54 37 42 33 58 37 19 32 45 41 54 50 39 58 58 58 46 54 47 50 49 52 53 37 50 33 58 50 35 51 50 34 58 26 37 50 58 22 18 50 54 46 33 50 50 51 52 51 39 35 41 39 43 32 47 30 43 54 52 52 50 31 34 50 43 24 31 58 48 34 53 46 47 46 46 47 41 49 50 49 32 35 39 39 44 36 46 49 58 53 29 47 50 31 32 29 28 53 32 52 41 13 49 50 51 50 50 51 39 54 49 50 16 39 34 58 29 41 30 35 29 31 32 25 30 38 45 54 54 32 32 54 49 28 32 27 40 37 50 19 33 22 41 54 31 18 49 30 37 19 15 34 19 24 29 10 54 54 29 17 49 51 25 34 46 21 41 32 46 31 20 25 29 30 31 28 14 54 14 45 46 23 51 30 54 22 33 34 22 18 14 38 46 54 21 37 54 7 26 28 31 23 25 25 18 38 11 21 52 40 39 28 31 27 35 14 7 9 25 19 28 40 32 45 32 49 44 24 32 16 38 21 21 31 31 24 18 21 27 19 16 37 33 35 30 36 27 12 9 30 25 22 23 21 14 10 40 26 51 46 24 29 33 36 21 26 28 31 37 31 29 31 32 12 10 31 20 33 27 31 25 15 30 22 31 20 28 8 25 25 31 32 42 31 17 46 46 46 29 9 29 23 36 21 24 31 16 15 10 28 20 8 22 11 36 19 33 19 22 31 10 19 21 11 16 9 13 25 19 7 9 7 11 18 7 14 23 31 27 18 37 37 22 26 26 8 11 5 7 7 29 22 12 14 11 11 30 44 12 8 13 28 31 24 10 6 7 15 19 20 8 9 20 14 37 24 16 32 22 23 6 4 4 4 4 20 10 27 19 10 5 6 21 13 9 5 11 7 7 7 20 36 11 10 14 10 8 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_56294973_56296123
seq2: B6Ng01-190L04.b_44_1198

seq1  GAATTCTTGGAATGGTGAGGAGCCATAGCAAAAATCTAGGCCTGGCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGAATGGTGAGGAGCCATAGCAAAAATCTAGGCCTGGCCTGC  50

seq1  GTCTAAGACTTGAGGCAATGACACCCAGGTAGTTAAGTCATTCTGGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGACTTGAGGCAATGACACCCAGGTAGTTAAGTCATTCTGGGAGA  100

seq1  AAAGACACCGTCCACGAATGCAGGATAGGTCAAAATCAGGTAAAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACACCGTCCACGAATGCAGGATAGGTCAAAATCAGGTAAAAAAAAA  150

seq1  TTGTGTAGAGAAGGCTCTGAGTAAGCATCCCCAGTGTGGTGCAAAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAGAGAAGGCTCTGAGTAAGCATCCCCAGTGTGGTGCAAAGTTCT  200

seq1  GAGCCTAGTGTGGTTGGGACAGAGAGTAGAGGACAAGGGGCATAGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGTGTGGTTGGGACAGAGAGTAGAGGACAAGGGGCATAGAGGAA  250

seq1  AGAGAAGAGAGGGCCAAGTCATAGCTCAGGCTGATCATCTAGGGACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAGAGGGCCAAGTCATAGCTCAGGCTGATCATCTAGGGACAACA  300

seq1  ATATAGTTACAGTCATTCATTCTTTCAGTGGACATTCATTTGGCACCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTACAGTCATTCATTCTTTCAGTGGACATTCATTTGGCACCAGG  350

seq1  AATGCTGGAGGTACTGACTACTAGGTGCTTCGTATGTATAATAAGCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGGAGGTACTGACTACTAGGTGCTTCGTATGTATAATAAGCAGGT  400

seq1  TATAGCCCTGGGCCTTGAGATCCACACAGTCAGATGGAGGAGAAAGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCCTGGGCCTTGAGATCCACACAGTCAGATGGAGGAGAAAGTCCT  450

seq1  AAAAGGATAATCAGAGGTGAGAGAGGAAGAGAACACAGAGAGTCTGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATAATCAGAGGTGAGAGAGGAAGAGAACACAGAGAGTCTGTCTT  500

seq1  GCTAGGCTTCATCCTGGGGGTCCAGCCTTCAAGTTCATGGGAGAAAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCTTCATCCTGGGGGTCCAGCCTTCAAGTTCATGGGAGAAAGCAG  550

seq1  ATAGCCAATGAACAGCAGGTGACTGACAGCATGAATCAAGAGAATGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAATGAACAGCAGGTGACTGACAGCATGAATCAAGAGAATGTGCC  600

seq1  TCACTTTCCCCATTGGCCAGCTATCCCAGCCATTTCCCTTAGTCTGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCCCCATTGGCCAGCTATCCCAGCCATTTCCCTTAGTCTGGATT  650

seq1  ACAGAGCTCTCTGAAAACATCCCTGTCTCATCACAAAGCAAGCGAATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTCTCTGAAAACATCCCTGTCTCATCACAAAGCAAGCGAATCTT  700

seq1  CTGACAGGGTGTCCTGGAAACTGGTATGGGACAGATGCGATTTGACCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGGGTGTCCTGGAAACTGGTATGGGACAGATGCGATTTGACCTTG  750

seq1  CTGTCACAGAGCTTGCAGCATAATGTGGACGACAGGCATTAAATAATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACAGAGCTTGCAGCATAATGTGGACGACAGGCATTAAATAATGAG  800

seq1  CCACACAAATAATTATGTGTCGTAATTTAAAATGATAGCATGCAATACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAAATAATTATGTGTCGTAATTTAAAATGATAGCATGCAATACAA  850

seq1  GATGTGTGAGATGATGGCAGGGGACAGG-AAGGGACCCAGGAAGGCTTTG  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GATGTGTGAGATGATGGCAGGGGACAGGAAAGGGACCCAGGAAGGCTTTG  900

seq1  GTGGGAAATC-GATATCTGAACGAGGAGCAGCAC-GGAGGGTGGGGGCAA  947
      |||||||||| ||||||||||||||||||||||| |||||||||||||||
seq2  GTGGGAAATCGGATATCTGAACGAGGAGCAGCACGGGAGGGTGGGGGCAA  950

seq1  ACATGACACACGGAGAAGAATGGCTA-GGATATTCAGAGAAAAGGGTAGC  996
      |||||||||||||||||| ||||||| |||||||||||| ||||||||||
seq2  ACATGACACACGGAGAAGGATGGCTAGGGATATTCAGAG-AAAGGGTAGC  999

seq1  TACACAGGCTACACA-GGCTCTGAGATCAGCGTGGAGCACTGTTCAAGCA  1045
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  TACACAAGCTACACAGGGCTCTGAGATCAGCGTGGAGCACTGTTCAAGCA  1049

seq1  TGGCTGGGCCACAG-AGATTAACTG--AGAAAAGGC-TAG-AGGGA--GT  1088
      |||||||||||||| ||||  ||||  ||||||||| ||| |||||  ||
seq2  TGGCTGGGCCACAGTAGAT--ACTGGAAGAAAAGGCTTAGAAGGGAAGGT  1097

seq1  CCAGAATCCTGAGAGGTGCCTGCCACTTTAGAGGTGTTCATCTCAC-GAC  1137
      |||| ||||||| ||||| ||| ||||||| ||||| ||||||| | |||
seq2  CCAG-ATCCTGA-AGGTG-CTG-CACTTTA-AGGTG-TCATCTCCCGGAC  1141

seq1  AAAGAGAAATTGGG  1151
       |||||||||||||
seq2  CAAGAGAAATTGGG  1155

seq1: chr7_56468666_56469720
seq2: B6Ng01-190L04.g_67_1115 (reverse)

seq1  TATTGTTTTGAGCTTTTTTATTTTTTTCCCTAGCTTCCAGTGTTTTGAAT  50
      |||||||| ||||   |||| |||||| ||||||||||||||||| ||| 
seq2  TATTGTTTGGAGC---TTTAATTTTTT-CCTAGCTTCCAGTGTTTGGAA-  45

seq1  TTTCAAAGATCAACTACCCTAGGCAGGCTAACAG-AGCTGAATAAATGCT  99
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  TTTCAAAGATCAACTA-CCTAGGCAGGCTAACAGAAGCTGAATAAATGCT  94

seq1  AGGAAACTGCCAGGCACCCCCTCCATAACCTTGTACATAGGAGAGAGGCA  149
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAA-TGCCAGGCACCCCCTCCATAACCTTGTACATAGGAGAGAGGCA  143

seq1  TAGAGCCCCCTTACCGGTCAGAGTCAGCTTGCCAGGATAAAGCTGACCTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGAGCCCCCTTACCGGTCAGAGTCAGCTTGCCAGGATAAAGCTGACTTG  193

seq1  AGTTAGAATCCTGTTTGTTTCCCTTACTGCTCTCTTCCCTCACTACTCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAATCCTGTTTGTTTCCCTTACTGCTCTCTTCCCTCACTACTCAC  243

seq1  TTCTCCTTTCTGAACTTTAATTTCTCTTCAATAAACGGGATAATAATGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTTCTGAACTTTAATTTCTCTTCAATAAACGGGATAATAATGCT  293

seq1  TACTCCAGATAATTGTTGTGTCTATAAAGCAACTGGCTAGGTAGGCTTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAGATAATTGTTGTGTCTATAAAGCAACTGGCTAGGTAGGCTTTC  343

seq1  CAGTATAGGGAATTAATAAACATAAATAAAGTTTGGCTCCTTAGATCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAGGGAATTAATAAACATAAATAAAGTTTGGCTCCTTAGATCCAA  393

seq1  AATGAGCATACCTGCCAGAAAGGTGGGTGTCCCAGCTCCCCTGTCCACCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCATACCTGCCAGAAAGGTGGGTGTCCCAGCTCCCCTGTCCACCT  443

seq1  GTCACCCCCAAAAGGCAATGGTAGGTTTCTCAAAGCCGCATGTTAGGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCCCAAAAGGCAATGGTAGGTTTCTCAAAGCCGCATGTTAGGAAT  493

seq1  GTTGCTAAATAACTTAGTTCTGTCAGCAACAGCCAATCTTTATTGAGCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTAAATAACTTAGTTCTGTCAGCAACAGCCAATCTTTATTGAGCAC  543

seq1  TTACTATGAGCCAGGTACAGTGCCAAGCACTTTCCATTAAATTACTAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATGAGCCAGGTACAGTGCCAAGCACTTTCCATTAAATTACTAAAT  593

seq1  GAATGAGAGTTAGTTGTGACTGGTAGTACTTAGCTAACTTCCTAATAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAGTTAGTTGTGACTGGTAGTACTTAGCTAACTTCCTAATAATG  643

seq1  AGAGACAGGCCCAGGACTTGAACACACATGGGGTAATGCCATACATAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGCCCAGGACTTGAACACACATGGGGTAATGCCATACATAGAG  693

seq1  ACGAGGTTCTCTTGGGATGACCCATGGCTAGGGCTCACTGTCAAGTAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGTTCTCTTGGGATGACCCATGGCTAGGGCTCACTGTCAAGTAATG  743

seq1  ATACCATAGTAGGAACTCAAGCATCATTCATGCCCACCCTCATTTGCACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATAGTAGGAACTCAAGCATCATTCATGCCCACCCTCATTTGCACA  793

seq1  GCAGTTATTCAGCTTCATTGTCTCATAGAGGGAAACTGAGTTTTGAACAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTATTCAGCTTCATTGTCTCATAGAGGGAAACTGAGTTTTGAACAG  843

seq1  TAAGGAGACACCCGGTCTGACTAGTAGAGCTGACCTATGAACCCAAGGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGACACCCGGTCTGACTAGTAGAGCTGACCTATGAACCCAAGGAT  893

seq1  CTTCAAATCCAATGAGTGTCCACCTCTGTGTGCACAATGGCGGGAGTCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATCCAATGAGTGTCCACCTCTGTGTGCACAATGGCGGGAGTCAG  943

seq1  GATGGACCGACCTGGTCTTCATGGATTGTTTTATATCCATGGCTTCTGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACCGACCTGGTCTTCATGGATTGTTTTATATCCATGGCTTCTGGC  993

seq1  CTGCTTCCACCTTCTGCCCAGCTACCAGTGTCTGACTGGAGCTAGCAATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCACCTTCTGCCCAGCTACCAGTGTCTGACTGGAGCTAGCAATG  1043

seq1  GAATTC  1055
      ||||||
seq2  GAATTC  1049

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Alignment Information