BAC Information

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BAC

Clone NameB6Ng01-190L21
Chromosome7 (Build37)
Map Location 144,776,511 - 144,976,215
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
Downstream geneLOC435235, Tcerg1l, LOC100043290
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190L21.bB6Ng01-190L21.g
ACCGA014422GA014423
length1,0121,186
definitionB6Ng01-190L21.b B6Ng01-190L21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,776,511 - 144,777,081)(144,975,058 - 144,976,215)
sequence
gaattctgctaccaggtttttaaaaagtgtagaaaacacttgataatatt
aacatgcaactttattagaggtgaaaaagtataacattaaaaaaaaaaaa
gctaggcctttaggcccaggcttgagaatgtgacctttgtgactcaatgc
tccaaggcatgctaattataaaacagatagcaacattcctccacccacct
gcttcctgggttcacggagtgttcgttcaaagaaagtcatactgaccgct
cctggaacctgctatgtaaatgtgctattgttaggggctcatagaaactg
ttttgagaaataactcgaacaattaccaggtattccttgtgactcttgtg
actttgcacttcctcatgactcttaactggtatttttggtattttctgac
aacaccctccccactcccctgagttgtggtttcttcctttaaataccccc
ttacccagctacttggggcccacacagtcctctaccttatgtagtgtact
gtgggaagccacatgtgccgttgcagagtggtgctggctactgctggcca
ccatgcataagtttggataaacaaccaatgtgtacatatgcagtaaagct
ttttgccaagtcactgcctggcccaggcatgttaatgaggtactgagaat
ataaccaatcagatgtgagacatgcaaatgaggtatgttaatgaggttct
gtgaggtactgagagagagtagccaatcagatgaggaacatgcaaatgag
gcatagtgcataaccaatctgggtgtgagacatgcctctcctaggcctat
ataggcagcaccagttctgggctcggggtctcttcgcctctgcaatcaag
ctctcccaataaacgtgtgcagaaggatcctgtttgcagcgtcgttcttg
ctggttcgagtcgggcgcgcgcacaagagtgttactactgtgggtcccag
agcgccgcctggaataaaagtcctcttgcggtttggtaacaagacgtttc
tcttgagtgatt

gaattccatagagagatgttgttcttttgagagaatctttttacattaga
aatttaggtgagacatcctgccaactaaacgagatgcctccctcatataa
attcattgataaaagcagaggatgtatagacatttgatgaaacaagggat
gccttagagtagacccgaatcctcttagatgtgtcacagaggcacagaga
tggaggcagtggacaggaacatctcagtgtcccaccatctatctgcacat
gggacactgaggcccactgtaagttgacacagttctgggaatacctggca
agatggttgccaaagtccagcctgatgaccctgtactcctggttcaagag
cagagtctgtagggaccagaaaggccaccagagggcagcagatgtatcac
aaggagctggctcagatataccttgacttggggaggggtatccctagaag
ttcccccaattgagtctcttactgtttttcttttccctgcagaaactaca
tattgaactttttttgaaaaggaaaagaaaggaggtcttagaagaaatgg
acagaaagtctagcacatcccaggaaagggacgcttgcctcccctacatg
aaaacctctgaaccaacctttctacaaactttaatttctcagctcacttg
tgtgataaacaataaattacaggcaatggtctcaaaatctttcctgcctt
aaaatatctccccacaactatgctgctccataaattaaaaatacaacata
gctggtactgtgacatgttcatggttttcttccggggtagctacccggtt
cctcatcccttttggcacaggacctcatggccaagagccaggctttgtcc
caacagaccctctatgcctccatcaagcgacacaggtgagtacccactga
atcccaagcaacccagtgagctgtggggcacccagatcttcctcttactt
ctgaagttcagagcttgtggtttaataaaggatgtgtagccactgtgacc
catatcacgttatcttccaagggaaattcagtatgggaaattaatgcctg
ccgattcttgttaagtcccatcaacccctgattctcaagcaggtggcaat
caagactgtgcaaactttttagcaaacagccttggaacttgaattgcatt
aagccacctaagtactctctcttgaaaaacatatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144776511_144777081
seq2: B6Ng01-190L21.b_43_613

seq1  GAATTCTGCTACCAGGTTTTTAAAAAGTGTAGAAAACACTTGATAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTACCAGGTTTTTAAAAAGTGTAGAAAACACTTGATAATATT  50

seq1  AACATGCAACTTTATTAGAGGTGAAAAAGTATAACATTAAAAAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCAACTTTATTAGAGGTGAAAAAGTATAACATTAAAAAAAAAAAA  100

seq1  GCTAGGCCTTTAGGCCCAGGCTTGAGAATGTGACCTTTGTGACTCAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCCTTTAGGCCCAGGCTTGAGAATGTGACCTTTGTGACTCAATGC  150

seq1  TCCAAGGCATGCTAATTATAAAACAGATAGCAACATTCCTCCACCCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGCATGCTAATTATAAAACAGATAGCAACATTCCTCCACCCACCT  200

seq1  GCTTCCTGGGTTCACGGAGTGTTCGTTCAAAGAAAGTCATACTGACCGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGGGTTCACGGAGTGTTCGTTCAAAGAAAGTCATACTGACCGCT  250

seq1  CCTGGAACCTGCTATGTAAATGTGCTATTGTTAGGGGCTCATAGAAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACCTGCTATGTAAATGTGCTATTGTTAGGGGCTCATAGAAACTG  300

seq1  TTTTGAGAAATAACTCGAACAATTACCAGGTATTCCTTGTGACTCTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGAAATAACTCGAACAATTACCAGGTATTCCTTGTGACTCTTGTG  350

seq1  ACTTTGCACTTCCTCATGACTCTTAACTGGTATTTTTGGTATTTTCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCACTTCCTCATGACTCTTAACTGGTATTTTTGGTATTTTCTGAC  400

seq1  AACACCCTCCCCACTCCCCTGAGTTGTGGTTTCTTCCTTTAAATACCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCTCCCCACTCCCCTGAGTTGTGGTTTCTTCCTTTAAATACCCCC  450

seq1  TTACCCAGCTACTTGGGGCCCACACAGTCCTCTACCTTATGTAGTGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAGCTACTTGGGGCCCACACAGTCCTCTACCTTATGTAGTGTACT  500

seq1  GTGGGAAGCCACATGTGCCGTTGCAGAGTGGTGCTGGCTACTGCTGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGCCACATGTGCCGTTGCAGAGTGGTGCTGGCTACTGCTGGCCA  550

seq1  CCATGCATAAGTTTGGATAAA  571
      |||||||||||||||||||||
seq2  CCATGCATAAGTTTGGATAAA  571


seq1: chr7_144975058_144976215
seq2: B6Ng01-190L21.g_68_1253 (reverse)

seq1  GGATA--TTTTTCA--AGAGAGTACCTAG--TGCTTATACCA--TCAAG-  41
      |||||  |||||||  ||||||||| |||   |||||   ||  ||||| 
seq2  GGATATGTTTTTCAAGAGAGAGTACTTAGGTGGCTTAATGCAATTCAAGT  50

seq1  TCCAA-GCTGTTTGCTAAAAA-TATGCACAGTC-TGATTGCCACCTGCTT  88
      ||||| ||||||||||||||| | ||||||||| ||||||||||||||||
seq2  TCCAAGGCTGTTTGCTAAAAAGTTTGCACAGTCTTGATTGCCACCTGCTT  100

seq1  GAGAATCA-GGGTTGAT-GGACTTAAC-AGAAACGGCA-GCATTAATTT-  133
      |||||||| |||||||| ||||||||| |||| ||||| |||||||||| 
seq2  GAGAATCAGGGGTTGATGGGACTTAACAAGAATCGGCAGGCATTAATTTC  150

seq1  CCATACTG-ATTTCCCTTGGAAGATAACGTGATAT-GGTCACAGT-GCTA  180
      |||||||| |||||||||||||||||||||||||| ||||||||| ||||
seq2  CCATACTGAATTTCCCTTGGAAGATAACGTGATATGGGTCACAGTGGCTA  200

seq1  CACAT-CTTTA-TAAACCAC-AGCTCTGAACTTCAGAAGTAAGAGG-AGA  226
      ||||| ||||| |||||||| ||||||||||||||||||||||||| |||
seq2  CACATCCTTTATTAAACCACAAGCTCTGAACTTCAGAAGTAAGAGGAAGA  250

seq1  TCTGGGTGCCCCACAGCTCACTGGGTTGC-TGGGA-TCAGTGGGTACTCA  274
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  TCTGGGTGCCCCACAGCTCACTGGGTTGCTTGGGATTCAGTGGGTACTCA  300

seq1  CCTGTGTCGCCTGATGGAGGCATAGAGGGTCTGTTGGGACAAAGCCTGGC  324
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCGCTTGATGGAGGCATAGAGGGTCTGTTGGGACAAAGCCTGGC  350

seq1  TCTTGGCCATGAGGTCCTGTGCC-AAAGGGATGAGGAACC-GGTAGCTAC  372
      ||||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  TCTTGGCCATGAGGTCCTGTGCCAAAAGGGATGAGGAACCGGGTAGCTAC  400

seq1  CCCGGAAGAAAACCATGAACATGTCACAGTACCAGCTATGTTGTATTTTT  422
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGAAGAAAACCATGAACATGTCACAGTACCAGCTATGTTGTATTTTT  450

seq1  AATTTATGGAGCAGCATAGTTGTGGGGAGATATTTTAAGGCAGGAAAGAT  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATGGAGCAGCATAGTTGTGGGGAGATATTTTAAGGCAGGAAAGAT  500

seq1  TTTGAGACCATTGCCTGTAATTTATTGTTTATCACACAAGTGAGCTGAGA  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACCATTGCCTGTAATTTATTGTTTATCACACAAGTGAGCTGAGA  550

seq1  AATTAAAGTTTGTAGAAAGGTTGGTTCAGAGGTTTTCATGTAGGGGAGGC  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGTTTGTAGAAAGGTTGGTTCAGAGGTTTTCATGTAGGGGAGGC  600

seq1  AAGCGTCCCTTTCCTGGGATGTGCTAGACTTTCTGTCCATTTCTTCTAAG  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTCCCTTTCCTGGGATGTGCTAGACTTTCTGTCCATTTCTTCTAAG  650

seq1  ACCTCCTTTCTTTTCCTTTTCAAAAAAAGTTCAATATGTAGTTTCTGCAG  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTTTCTTTTCCTTTTCAAAAAAAGTTCAATATGTAGTTTCTGCAG  700

seq1  GGAAAAGAAAAACAGTAAGAGACTCAATTGGGGGAACTTCTAGGGATACC  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGAAAAACAGTAAGAGACTCAATTGGGGGAACTTCTAGGGATACC  750

seq1  CCTCCCCAAGTCAAGGTATATCTGAGCCAGCTCCTTGTGATACATCTGCT  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCAAGTCAAGGTATATCTGAGCCAGCTCCTTGTGATACATCTGCT  800

seq1  GCCCTCTGGTGGCCTTTCTGGTCCCTACAGACTCTGCTCTTGAACCAGGA  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTGGTGGCCTTTCTGGTCCCTACAGACTCTGCTCTTGAACCAGGA  850

seq1  GTACAGGGTCATCAGGCTGGACTTTGGCAACCATCTTGCCAGGTATTCCC  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGTCATCAGGCTGGACTTTGGCAACCATCTTGCCAGGTATTCCC  900

seq1  AGAACTGTGTCAACTTACAGTGGGCCTCAGTGTCCCATGTGCAGATAGAT  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTGTCAACTTACAGTGGGCCTCAGTGTCCCATGTGCAGATAGAT  950

seq1  GGTGGGACACTGAGATGTTCCTGTCCACTGCCTCCATCTCTGTGCCTCTG  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGACACTGAGATGTTCCTGTCCACTGCCTCCATCTCTGTGCCTCTG  1000

seq1  TGACACATCTAAGAGGATTCGGGTCTACTCTAAGGCATCCCTTGTTTCAT  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATCTAAGAGGATTCGGGTCTACTCTAAGGCATCCCTTGTTTCAT  1050

seq1  CAAATGTCTATACATCCTCTGCTTTTATCAATGAATTTATATGAGGGAGG  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTCTATACATCCTCTGCTTTTATCAATGAATTTATATGAGGGAGG  1100

seq1  CATCTCGTTTAGTTGGCAGGATGTCTCACCTAAATTTCTAATGTAAAAAG  1122
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCGTTTAGTTGGCAGGATGTCTCACCTAAATTTCTAATGTAAAAAG  1150

seq1  ATTCTCTCAAAAGAACAACATCTCTCTATGGAATTC  1158
      ||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCAAAAGAACAACATCTCTCTATGGAATTC  1186


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