BAC Information

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BAC

Clone NameB6Ng01-191C06
Chromosome7 (Build37)
Map Location 67,488,576 - 67,489,280
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849
Downstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191C06.bB6Ng01-191C06.g
ACCGA014712GA014713
length1,1881,211
definitionB6Ng01-191C06.b B6Ng01-191C06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaatgatactgcaaatgctggcatcaaacatgccaaaggaat
ctgtaggtcttagcagagaacatactaattttatttttctgactggtcgt
tttgtcaaacttccatttaaatatttctgtttatttccatagttacatgc
tgttgattctttgagtagattagactcttattagagtttgtgttgaatag
cacaaaggtgaataactacttaaaatactaagaataaggaactgtcatta
ttcagtcatagttgggacatctaaaacaacctgtactggggtcacacaat
attaaggacaaagttgtggaaactaaatgaaagctagaggattggagaag
tactcagaaatatttctctataaatgatatgactgtttaaacatgacctc
caaaagttatggttaaatgtatattccccaagaagatcaagagcaaattc
aaaaatgaaggatgaaggtgctctaaatattccaaccctacctgcagaca
tttctatagtaatgaatactagtaagatagcaagtgtccagtttccttag
aaatgtggtcactgataatgttaaagagagtatatttcagcataataaga
caatgaaaatcaaactcagagctagcattctagtaaatgattagaaactc
aaagcactttcatgaaaatcaagaaaaagacaagaaaggtcacacttcct
gtcttattcagtacagtattaggagtcttaggtaagcaacaagaatgaaa
gctataaaggccataggagtaggaaacgccgaagtcaattaatttcaatt
taaatatgatatgattctataagttaaaaaaatgttctaaatatgccacc
ggaaactgcataatgctaataatcacattcagcaaaattccaggaggaaa
aacctgaaaaatcatgtttatgtaataatagtttgagaaaaaaatcatag
acaaagtattatttacattatataaatatatataaattatgttatacata
acattgttacattgttatttgtataaacataatattcatatatgtaaata
tatttatgtatatataattatatgtatacataaattgcatactacttaca
actaccaccccacccatacatactacaaacatatatgattctggccagtc
aactcttcttacctccttgttcagagcctaccaataga
gaattcatttatagccaaagggcattgaagggccagtgggtagaaaatta
ttgaatactgaggaagactgtctcaagaaggatcagagtgataagatatc
atcttgaaagagggagggatgagaaatatattcagatgagtatgatggtg
gattatttcacattgaaaatggtccttattaaggtagaatttaaagtgaa
agtacatacataacataaaaatatcctgtataaaatttaactgtggaaag
aatgtcatttttaggacatttaagaggcttgttgttgttgttcttattgt
ttctgcatttttcattattaattacttttattacatttcaaactttgtcc
ccttcccagtctcccctgtgttacccctcacctcattgccctcccatttt
cctctaagagtatgctgccccacccactcactaagcacctcacccctcta
gcatctccctttgatgaggcaacaaacctccacaggaccaagagtctccc
ctcccaatgatgccagataagtcagtcctccactaaatatatagccagag
ccatggactgactcatgtatactctttggttgtggtttagtccttgggag
ctctgaggcatctggttagtagatactgttgttcttcctatagggttaca
ttccccttcagctccttcagaccttcccctaactcttccattggggtgcc
caggctcattccaatggttggctgtaagtatctacatctgtcttagtcag
gtgctagaagagtatctcagaagacagctataccaaactcctatctgtaa
gcacttcttggcatcagcaacccagatgcccttcaatggaagaatggata
cagaaaatgtggtactgttacacaataaaatactactcagctattagaat
caatgacttcagaattttgcagataaatgggttggaactaaaatttttat
cccaagtgagataacccagacccaaaggacatacatagtgtgtactcact
gatagttgaatattattagctcaaaatctcagactcccataataacaaat
acagacatatgaagcttaaccagagaaggccaacttgtgagcctcattcc
acttacaggggaccaaatcgactgccttctgttatggattactcgtaaat
tgtcaagagtcaactctagagttataccttctccaaaagtgcctctctgt
gggtgtttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67488576_67489280
seq2: B6Ng01-191C06.b_543_1234

seq1  GACATTTCTATAGTAATGAATACTAGTAAGATAGCAAGTGTCCAGTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTCTATAGTAATGAATACTAGTAAGATAGCAAGTGTCCAGTTTCC  50

seq1  TTAGAAATGTGGTCACTGATAATGTTAAAGAGAGTATATTTCAGCATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATGTGGTCACTGATAATGTTAAAGAGAGTATATTTCAGCATAAT  100

seq1  AAGACAATGAAAATCAAACTCAGAGCTAGCATTCTAGTAAATGATTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATGAAAATCAAACTCAGAGCTAGCATTCTAGTAAATGATTAGAA  150

seq1  ACTCAAAGCACTTTCATGAAAATCAAGAAAAAGACAAGAAAGGTCACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGCACTTTCATGAAAATCAAGAAAAAGACAAGAAAGGTCACACT  200

seq1  TCCTGTCTTATTCAGTACAGTATTAGGAGTCTTAGGTAAGCAACAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTTATTCAGTACAGTATTAGGAGTCTTAGGTAAGCAACAAGAAT  250

seq1  GAAAGCTATAAAGGCCATAGGAGTAGGAAACGCCGAAGTCAATTAATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTATAAAGGCCATAGGAGTAGGAAACGCCGAAGTCAATTAATTTC  300

seq1  AATTTAAATATGATATGATTCTATAAGTTAAAAAAATGTTCTAAATATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATATGATATGATTCTATAAGTTAAAAAAATGTTCTAAATATGC  350

seq1  CACCGGAAACTGCATAATGCTAATAATCACATTCAGCAAAATTCCAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGGAAACTGCATAATGCTAATAATCACATTCAGCAAAATTCCAGGAG  400

seq1  GAAAAACCTGAAAAATCATGTTTATGTAATAAATAGTTTGAGAAAAAAAT  450
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAAAAACCTGAAAAATCATGTTTATGTAAT-AATAGTTTGAGAAAAAAAT  449

seq1  CATAGACAAAGTATTATTTACATTATATAAATATATATAAATTATGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACAAAGTATTATTTACATTATATAAATATATATAAATTATGTTAT  499

seq1  ACATAACATTGTTACATTGTTATTTGTAATAAACATAATATTCATATTAT  550
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  ACATAACATTGTTACATTGTTATTTGT-ATAAACATAATATTCATA-TAT  547

seq1  GTAAATTATTATTTATGTATATATAAATTATATGTATACATAAATTGCAT  600
      ||||||   ||||||||||||||| |||||||||||||||||||||||||
seq2  GTAAAT--ATATTTATGTATATAT-AATTATATGTATACATAAATTGCAT  594

seq1  ACATACATACATACATACA-CACACACATACATACATACAAACATATATG  649
      || ||| |||| ||   || | ||| ||||||||| ||||||||||||||
seq2  AC-TACTTACA-ACTACCACCCCACCCATACATAC-TACAAACATATATG  641

seq1  ATTCCTGCCAAAGGTCATACCTCTTCTTACCTCTCTGTTCAAGAGCCTA-  698
      ||||  ||||   |||  | |||||||||||||  ||||| |||||||| 
seq2  ATTCTGGCCA---GTC--AACTCTTCTTACCTCCTTGTTC-AGAGCCTAC  685

seq1  CAATAGA  705
      |||||||
seq2  CAATAGA  692