BAC Information

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BAC

Clone NameB6Ng01-191D19
Chromosome7 (Build37)
Map Location 103,303,618 - 103,449,661
singlet/doubletdoublet
Overlap geneEG666836, Odz4
Upstream geneLOC666823, Frda-ps
Downstream geneLOC670727, LOC666858, Nars2, Gab2, LOC100040457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D19.bB6Ng01-191D19.g
ACCGA014782GA014783
length1,1271,010
definitionB6Ng01-191D19.b B6Ng01-191D19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,303,618 - 103,304,752)(103,448,653 - 103,449,661)
sequence
gaattctcaaagaaccatctcctttgaaagggtcagaatcatacttgtct
gtgaatgactagtcagttcaagagatattttcatcagagaactcagagcc
aatcaggaaacttatttgcataaaatctttaatcaagttccaaaacccag
accccagtcttacccaaagtaagattgcatgttataagacccttattttc
caaggacagatgtcactaaggacatataccttatatcttgagatatacct
tataccttataccttatatcatatcttgagagagcagtgagggagcagaa
gggacatctgtctagttctgtactgaaccatggaactcaaatttcatgtg
gccccatcatgcactttcaaccagaaattccttcaagaccacttgctaag
ggaccttaaataagtccttctgtttccataaacctacttgcactgcttta
aggcaggaattgtgtggaattaaataccaagattctgtggcacctttagg
ttcttcaaggtttttgccagccaaacatttaaaactacccctcactgact
caacagtaaaggagtttactaccaatccagacagcctgagcttgattccc
agtacccacacagtggaaggaaagaactgattcctgcaaggtatccttgg
accagttcacaagttgcacacataaataaagcaataaatttttaagaagt
ccatgaaatgatattcacaaacacataactgcttcttcaagacacatatc
caagcaaccacctaccaacgtctgtgttcagtcaccttttcttgaggcaa
ttttaaaggatctatttttattgtttcagtaatgttgaatgcatcatgaa
atgttaatattagaaacaataatataaaataaatgctttctctgccaagt
gcctaataacattgaggcaataataaagtataaatagaaaaaaaacttgt
attggtatctaaatgaacattaaaatctaccttattttggaattataact
ggagaaaaaaaaatgataaataacaccaaattacaaaatatcccttggat
tgtagcacaatccagccctgatgagtgaaggcagagacaagaatagagct
agctggttacaaagagaaccctgtttg

gaattccacctcgggattatcctcagcccttcccatcctgctacaacact
tctctccctgcctcccccctctagccctgaagcactgtacaaagtgatcc
ttcccttcctgtccttggtctgacctgggcttttggggttgtttgtgcag
tgtctgaggattaggctccacctgcttcattgtccttgccattcagagtg
tgtctcagtggtttggtggctttactctcggactcatgaggccttggccc
ttctagctcctcacatgagcataactaaagcttgcttcaccgtgacccgt
ctttagtgtgaatgcctacggacaagggaatcatggatttttgctactgg
ccccagatgtagaggatcagttgacttagtctttcttctctgtctggctt
tggacactatgcaatcatgatagtcagtttctgtagcagctagctgaatc
aggcatcctgttctacagatgagcatacataggcacagggaagagaaagg
gcacacagcctggggtttcataaatagaagttagaacttagtcccacacc
catgtctgctgactccagaggttgagctttgacatgcagtcagagtctaa
gtttctcacctgtaaaatgaggatattggttttttttaatcagatagttc
cttagaaacaccaaaacacaccatgtttacctatcgatgtgaagtaggta
gctgggtacttagatgtaagcacttgattcaaaggcccttgatttctctt
ttggaaaggatgcataaagccgggcggtgggtggtgcacacctttaatcc
cagcacttgggaggcagaggcaggggatttctgagtttgaggccagcctg
gtctacaaagtgagtttccaggacagccagggtttacacaaagaaaccct
gtcctcaaacaaacaaaccaaccaaaaccaaacaatactaactaatcaac
gggtgtcatactaaaaatgcattttgcttgagaggttgcatagttactct
ggacaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103303618_103304752
seq2: B6Ng01-191D19.b_45_1171

seq1  GAATTCTCAAAGAACCATCTCCTTTGAAAGGGTCAGAATCATACTTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAGAACCATCTCCTTTGAAAGGGTCAGAATCATACTTGTCT  50

seq1  GTGAATGACTAGTCAGTTCAAGAGATATTTTCATCAGAGAACTCAGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGACTAGTCAGTTCAAGAGATATTTTCATCAGAGAACTCAGAGCC  100

seq1  AATCAGGAAACTTATTTGCATAAAATCTTTAATCAAGTTCCAAAACCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGAAACTTATTTGCATAAAATCTTTAATCAAGTTCCAAAACCCAG  150

seq1  ACCCCAGTCTTACCCAAAGTAAGATTGCATGTTATAAGACCCTTATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTCTTACCCAAAGTAAGATTGCATGTTATAAGACCCTTATTTTC  200

seq1  CAAGGACAGATGTCACTAAGGACATATACCTTATATCTTGAGATATACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACAGATGTCACTAAGGACATATACCTTATATCTTGAGATATACCT  250

seq1  TATACCTTATACCTTATATCATATCTTGAGAGAGCAGTGAGGGAGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTTATACCTTATATCATATCTTGAGAGAGCAGTGAGGGAGCAGAA  300

seq1  GGGACATCTGTCTAGTTCTGTACTGAACCATGGAACTCAAATTTCATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATCTGTCTAGTTCTGTACTGAACCATGGAACTCAAATTTCATGTG  350

seq1  GCCCCATCATGCACTTTCAACCAGAAATTCCTTCAAGACCACTTGCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATCATGCACTTTCAACCAGAAATTCCTTCAAGACCACTTGCTAAG  400

seq1  GGACCTTAAATAAGTCCTTCTGTTTCCATAAACCTACTTGCACTGCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTAAATAAGTCCTTCTGTTTCCATAAACCTACTTGCACTGCTTTA  450

seq1  AGGCAGGAATTGTGTGGAATTAAATACCAAGATTCTGTGGCACCTTTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAATTGTGTGGAATTAAATACCAAGATTCTGTGGCACCTTTAGG  500

seq1  TTCTTCAAGGTTTTTGCCAGCCAAACATTTAAAACTACCCCTCACTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAGGTTTTTGCCAGCCAAACATTTAAAACTACCCCTCACTGACT  550

seq1  CAACAGTAAAGGAGTTTACTACCAATCCAGACAGCCTGAGCTTGATTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTAAAGGAGTTTACTACCAATCCAGACAGCCTGAGCTTGATTCCC  600

seq1  AGTACCCACACAGTGGAAGGAAAGAACTGATTCCTGCAAGGTATCCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCACACAGTGGAAGGAAAGAACTGATTCCTGCAAGGTATCCTTGG  650

seq1  ACCAGTTCACAAGTTGCACACATAAATAAAGCAATAAATTTTTAAGAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTCACAAGTTGCACACATAAATAAAGCAATAAATTTTTAAGAAGT  700

seq1  CCATGAAATGATATTCACAAACACATAACTGCTTCTTCAAGACACATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAATGATATTCACAAACACATAACTGCTTCTTCAAGACACATATC  750

seq1  CAAGCAACCACCTACCAACGTCTGTGTTCAGTCACCTTTTCTTGAGGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAACCACCTACCAACGTCTGTGTTCAGTCACCTTTTCTTGAGGCAA  800

seq1  TTTTAAAGGATCTATTTTTATTGTTTCAGTAATGTTGAATGCATCATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGGATCTATTTTTATTGTTTCAGTAATGTTGAATGCATCATGAA  850

seq1  ATGTTAATATTAGAAACAATAATATAAAATAAATGCTTTCTCTGCCAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATATTAGAAACAATAATATAAAATAAATGCTTTCTCTGCCAAGT  900

seq1  GCCTAATAACATTGAGGCAATAATAAAGTATAAATAGAAAAAAAAACTTG  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCCTAATAACATTGAGGCAATAATAAAGTATAAATAG-AAAAAAAACTTG  949

seq1  TATTGGTATCTTAAATGAACATTAAAATCTACCTTATTTTGGAATTAT-A  999
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  TATTGGTATC-TAAATGAACATTAAAATCTACCTTATTTTGGAATTATAA  998

seq1  CTGGAG-AAAAAAAATGATAAATAACACAAATTAACAAAATATCCCTGGG  1048
      |||||| ||||||||||||||||||||| || | ||||||||||||| ||
seq2  CTGGAGAAAAAAAAATGATAAATAACACCAAATTACAAAATATCCCTTGG  1048

seq1  ATTGTAGCACAATCCCAGCCCTTGATGAGGTGGAGGCAGGAGGACCAAGA  1098
      ||||||||||||| ||||||| |||||| ||| ||||| |||   |||||
seq2  ATTGTAGCACAAT-CCAGCCC-TGATGA-GTGAAGGCA-GAG--ACAAGA  1092

seq1  ATTAGAGGCTAGCCTGGGTTAC-AAGAG-ACCCTGTTTG  1135
      | |||| ||||||   |||||| ||||| ||||||||||
seq2  A-TAGA-GCTAGC--TGGTTACAAAGAGAACCCTGTTTG  1127


seq1: chr7_103448653_103449661
seq2: B6Ng01-191D19.g_64_1073 (reverse)

seq1  TTTCCTGT-CAGAGTAACTATGCAACCTCTTCAAGCCAAATGCA-TTTTA  48
      |||||||| |||||||||||||||||||| |||||| ||||||| |||||
seq2  TTTCCTGTCCAGAGTAACTATGCAACCTC-TCAAGCAAAATGCATTTTTA  49

seq1  GTATG-CACCCGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT  97
      ||||| ||||||  ||| || | || || |||||| |||||| || ||||
seq2  GTATGACACCCG--TTGATTAG-TTAGTATTGTTTGGTTTTGGTTGGTTT  96

seq1  TGTTTTGTTTTGAGACAGGGTTTCTTTGTGT-AACCCTGGCTGTCCTGG-  145
         |||||||   |||||||||||||||||| ||||||||||||||||| 
seq2  --GTTTGTTTGAGGACAGGGTTTCTTTGTGTAAACCCTGGCTGTCCTGGA  144

seq1  AACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCCCTGCCTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCCCTGCCTC  194

seq1  TGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCA-CCACCGCCCGGC-T  243
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  TGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCCACCGCCCGGCTT  244

seq1  TATGCATCCTTTCCAAAAGAGAAATCAAGGGCCTTTGAATCAAGTGCTTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATCCTTTCCAAAAGAGAAATCAAGGGCCTTTGAATCAAGTGCTTA  294

seq1  CATCTAAGTACCCAGCTACCTACTTCACATCGATAGGTAAACATGGTGTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGTACCCAGCTACCTACTTCACATCGATAGGTAAACATGGTGTG  344

seq1  TTTTGGTGTTTCTAAGGAACTATCTGATTAAAAAAAACCAATATCCTCAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGTTTCTAAGGAACTATCTGATTAAAAAAAACCAATATCCTCAT  394

seq1  TTTACAGGTGAGAAACTTAGACTCTGACTGCATGTCAAAGCTCAACCTCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGGTGAGAAACTTAGACTCTGACTGCATGTCAAAGCTCAACCTCT  444

seq1  GGAGTCAGCAGACATGGGTGTGGGACTAAGTTCTAACTTCTATTTATGAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAGCAGACATGGGTGTGGGACTAAGTTCTAACTTCTATTTATGAA  494

seq1  ACCCCAGGCTGTGTGCCCTTTCTCTTCCCTGTGCCTATGTATGCTCATCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGGCTGTGTGCCCTTTCTCTTCCCTGTGCCTATGTATGCTCATCT  544

seq1  GTAGAACAGGATGCCTGATTCAGCTAGCTGCTACAGAAACTGACTATCAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACAGGATGCCTGATTCAGCTAGCTGCTACAGAAACTGACTATCAT  594

seq1  GATTGCATAGTGTCCAAAGCCAGACAGAGAAGAAAGACTAAGTCAACTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCATAGTGTCCAAAGCCAGACAGAGAAGAAAGACTAAGTCAACTGA  644

seq1  TCCTCTACATCTGGGGCCAGTAGCAAAAATCCATGATTCCCTTGTCCGTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTACATCTGGGGCCAGTAGCAAAAATCCATGATTCCCTTGTCCGTA  694

seq1  GGCATTCACACTAAAGACGGGTCACGGTGAAGCAAGCTTTAGTTATGCTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCACACTAAAGACGGGTCACGGTGAAGCAAGCTTTAGTTATGCTC  744

seq1  ATGTGAGGAGCTAGAAGGGCCAAGGCCTCATGAGTCCGAGAGTAAAGCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGGAGCTAGAAGGGCCAAGGCCTCATGAGTCCGAGAGTAAAGCCA  794

seq1  CCAAACCACTGAGACACACTCTGAATGGCAAGGACAATGAAGCAGGTGGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCACTGAGACACACTCTGAATGGCAAGGACAATGAAGCAGGTGGA  844

seq1  GCCTAATCCTCAGACACTGCACAAACAACCCCAAAAGCCCAGGTCAGACC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATCCTCAGACACTGCACAAACAACCCCAAAAGCCCAGGTCAGACC  894

seq1  AAGGACAGGAAGGGAAGGATCACTTTGTACAGTGCTTCAGGGCTAGAGGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGGAAGGGAAGGATCACTTTGTACAGTGCTTCAGGGCTAGAGGG  944

seq1  GGGAGGCAGGGAGAGAAGTGTTGTAGCAGGATGGGAAGGGCTGAGGATAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGGGAGAGAAGTGTTGTAGCAGGATGGGAAGGGCTGAGGATAA  994

seq1  TCCCGAGGTGGAATTC  1009
      ||||||||||||||||
seq2  TCCCGAGGTGGAATTC  1010


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