BAC Information

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BAC

Clone NameB6Ng01-191K05
Chromosome7 (Build37)
Map Location 104,954,539 - 105,059,906
singlet/doubletdoublet
Overlap genePak1
Upstream geneOdz4, Nars2, Gab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594
Downstream geneGdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K05.bB6Ng01-191K05.g
ACCGA015079GA015080
length6681,122
definitionB6Ng01-191K05.b B6Ng01-191K05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,954,539 - 104,955,206)(105,058,780 - 105,059,906)
sequence
gaattcaatacagttttgagagaggggttaaagtctacttctgatggcta
aggatgcagctcaatgatagagcatgtgtttggcacacacaaggtcctac
atttaattgtcagcactgaaaaaagaaatctaaagaaaaaaatgcatcca
ggttgaatttctttgaataaactctttagattgcaattaagaattgaact
cctaactcctaagaatggcagattttgctggaagctgttgctatgacaac
taaatctagagttgtgctttctctgctgcagtttgttctgcagaaaaatg
ttctatgtccagtctaatcctttatctaatcttgttccaaattggtatct
agtttgagagttatctacttggcaaacctaagtcatacttataagagagt
aaaacaaatctaattttgtttcccaaactgtagtacctaggagattgaaa
tagatttgagaaaactagtttacatattggttatagagagtattcaggtg
ctagtgcatttttctagtaccaaatctgaaattcttttagtacaaaacct
tacttaaattttttgtaaattatgttgatttttatatcatgcttatgtta
tcttccctatgtttgtttagtaaactggctgaaaccagcaatgggagtgg
ggagtagggggagagaga
gaattcctatttagaaatggcctctgctggattactcgtccagttgcaat
tctcttcagtgctagacagtttccaaggatcaaagtcttgggagcactag
atcaggaaatgggagaagcaaggaaaggagaagaggacatgaggggtcgg
agttcctgaaacaagtgtttatttcatagaaggcttggcacatgaggctg
ggatgagcgtggtttcagtgattgttcttggttgcctcttttgctgcagc
aatcagtggagtcaggctagagaggggcttggcaatcttcaggaactgat
gctagaagaagaaaaaaccaaatgagttgagtgtttgccattcttacata
gcagctattaccagacagtaagggcctcagtgacagatcatccttgaatt
gacttgtttatttatccttttgtgtgtgtgtggggggggtgcatccatgc
catgatgtgcatgtgtgtgtaggtccatttgcaagaaggaattcttttca
cgactacaggtacaggaaaattgtcctcaagttgtcagacttggcagcag
gtgctcatacccagtaagttatctcattgaccaagtatacaagttttatt
tgtaagtcattaactgtaagaaaaaaaaaagctcaaaaaattaatagttc
catagtcatatgccattatatagaatattagcacagtaactaacacactg
aaagcacaatggatccacagacattttgagtgaaagaagtaagacaagaa
gttcattttacatggttttgtttgttcctgggtaaaattcacctctggca
acaacagagtaactattctttctggagaagacacctatctttcgtcttaa
actccagccctcgacctgttagctggaactataagcatgcaccatatgtg
gctaagaatcttttgttcactctttgactccagcaaggcgaagtatccag
taaggactttaaggtcctttacaatgttacattgtaatgtactttggagc
catacttccatttaaaaaatatttagaagaaaaatatcatatgaatgtat
aggaataattttttatgtactcagagctccctacttaactgggtggaatt
gtttttgggggtttgacttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104954539_104955206
seq2: B6Ng01-191K05.b_44_711

seq1  GAATTCAATACAGTTTTGAGAGAGGGGTTAAAGTCTACTTCTGATGGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACAGTTTTGAGAGAGGGGTTAAAGTCTACTTCTGATGGCTA  50

seq1  AGGATGCAGCTCAATGATAGAGCATGTGTTTGGCACACACAAGGTCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCAGCTCAATGATAGAGCATGTGTTTGGCACACACAAGGTCCTAC  100

seq1  ATTTAATTGTCAGCACTGAAAAAAGAAATCTAAAGAAAAAAATGCATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTGTCAGCACTGAAAAAAGAAATCTAAAGAAAAAAATGCATCCA  150

seq1  GGTTGAATTTCTTTGAATAAACTCTTTAGATTGCAATTAAGAATTGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAATTTCTTTGAATAAACTCTTTAGATTGCAATTAAGAATTGAACT  200

seq1  CCTAACTCCTAAGAATGGCAGATTTTGCTGGAAGCTGTTGCTATGACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTCCTAAGAATGGCAGATTTTGCTGGAAGCTGTTGCTATGACAAC  250

seq1  TAAATCTAGAGTTGTGCTTTCTCTGCTGCAGTTTGTTCTGCAGAAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTAGAGTTGTGCTTTCTCTGCTGCAGTTTGTTCTGCAGAAAAATG  300

seq1  TTCTATGTCCAGTCTAATCCTTTATCTAATCTTGTTCCAAATTGGTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTCCAGTCTAATCCTTTATCTAATCTTGTTCCAAATTGGTATCT  350

seq1  AGTTTGAGAGTTATCTACTTGGCAAACCTAAGTCATACTTATAAGAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAGAGTTATCTACTTGGCAAACCTAAGTCATACTTATAAGAGAGT  400

seq1  AAAACAAATCTAATTTTGTTTCCCAAACTGTAGTACCTAGGAGATTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAATCTAATTTTGTTTCCCAAACTGTAGTACCTAGGAGATTGAAA  450

seq1  TAGATTTGAGAAAACTAGTTTACATATTGGTTATAGAGAGTATTCAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGAGAAAACTAGTTTACATATTGGTTATAGAGAGTATTCAGGTG  500

seq1  CTAGTGCATTTTTCTAGTACCAAATCTGAAATTCTTTTAGTACAAAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGCATTTTTCTAGTACCAAATCTGAAATTCTTTTAGTACAAAACCT  550

seq1  TACTTAAATTTTTTGTAAATTATGTTGATTTTTATATCATGCTTATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAATTTTTTGTAAATTATGTTGATTTTTATATCATGCTTATGTTA  600

seq1  TCTTCCCTATGTTTGTTTAGTAAACTGGCTGAAACCAGCAATGGGAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTATGTTTGTTTAGTAAACTGGCTGAAACCAGCAATGGGAGTGG  650

seq1  GGAGTAGGGGGAGAGAGA  668
      ||||||||||||||||||
seq2  GGAGTAGGGGGAGAGAGA  668

seq1: chr7_105058780_105059906
seq2: B6Ng01-191K05.g_66_1187 (reverse)

seq1  CAAAAATCAAACCCCC-AAAACAA-TCCACCAGTTTAAGTAAGAGACTCT  48
      ||||| |||||||||| ||||||| ||||||   ||||||| |   ||||
seq2  CAAAAGTCAAACCCCCAAAAACAATTCCACCCAGTTAAGTAGGGAGCTCT  50

seq1  GAGTTACATAAAAAATTATTTCCTATAACATTTTCATATGATATTTTTCT  98
      ||| |||||||||||||| ||||||| |||  ||||||||||||||||||
seq2  GAG-TACATAAAAAATTA-TTCCTAT-ACA--TTCATATGATATTTTTCT  95

seq1  CTTAAATAATTTTTTAAATTGGAAGTATGGCT-CAAAGTACATTACAATG  147
        ||||| |||||||||| ||||||||||||| |||||||||||||||||
seq2  TCTAAAT-ATTTTTTAAA-TGGAAGTATGGCTCCAAAGTACATTACAATG  143

seq1  TAACATTGTAAAGGACCTTAAAGTCCTTACTGGAATACTTCGCCTTGCTG  197
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAACATTGTAAAGGACCTTAAAGTCCTTACTGG-ATACTTCGCCTTGCTG  192

seq1  GAGTCAAAGAGTGAACAAAAGATTCTTAGCCACATATGGTGCATGCTTAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAAGAGTGAACAAAAGATTCTTAGCCACATATGGTGCATGCTTAT  242

seq1  AGTTCCAGCTAACAGGTCGAGGGCTGGAGTTTAAGACGAAAGATAGGTGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGCTAACAGGTCGAGGGCTGGAGTTTAAGACGAAAGATAGGTGT  292

seq1  CTTCTCCAGAAAGAATAGTTACTCTGTTGTTGCCAGAGGTGAATTTTACC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAGAAAGAATAGTTACTCTGTTGTTGCCAGAGGTGAATTTTACC  342

seq1  CAGGAACAAACAAAACCATGTAAAATGAACTTCTTGTCTTACTTCTTTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACAAACAAAACCATGTAAAATGAACTTCTTGTCTTACTTCTTTCA  392

seq1  CTCAAAATGTCTGTGGATCCATTGTGCTTTCAGTGTGTTAGTTACTGTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATGTCTGTGGATCCATTGTGCTTTCAGTGTGTTAGTTACTGTGC  442

seq1  TAATATTCTATATAATGGCATATGACTATGGAACTATTAATTTTTTGAGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTCTATATAATGGCATATGACTATGGAACTATTAATTTTTTGAGC  492

seq1  TTTTTTTTTTCTTACAGTTAATGACTTACAAATAAAACTTGTATACTTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCTTACAGTTAATGACTTACAAATAAAACTTGTATACTTGG  542

seq1  TCAATGAGATAACTTACTGGGTATGAGCACCTGCTGCCAAGTCTGACAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAGATAACTTACTGGGTATGAGCACCTGCTGCCAAGTCTGACAAC  592

seq1  TTGAGGACAATTTTCCTGTACCTGTAGTCGTGAAAAGAATTCCTTCTTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGACAATTTTCCTGTACCTGTAGTCGTGAAAAGAATTCCTTCTTGC  642

seq1  AAATGGACCTACACACACATGCACATCATGGCATGGATGCACCCCCCCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGACCTACACACACATGCACATCATGGCATGGATGCACCCCCCCCA  692

seq1  CACACACACAAAAGGATAAATAAACAAGTCAATTCAAGGATGATCTGTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAAAGGATAAATAAACAAGTCAATTCAAGGATGATCTGTCA  742

seq1  CTGAGGCCCTTACTGTCTGGTAATAGCTGCTATGTAAGAATGGCAAACAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCCTTACTGTCTGGTAATAGCTGCTATGTAAGAATGGCAAACAC  792

seq1  TCAACTCATTTGGTTTTTTCTTCTTCTAGCATCAGTTCCTGAAGATTGCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCATTTGGTTTTTTCTTCTTCTAGCATCAGTTCCTGAAGATTGCC  842

seq1  AAGCCCCTCTCTAGCCTGACTCCACTGATTGCTGCAGCAAAAGAGGCAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCTCTCTAGCCTGACTCCACTGATTGCTGCAGCAAAAGAGGCAAC  892

seq1  CAAGAACAATCACTGAAACCACGCTCATCCCAGCCTCATGTGCCAAGCCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACAATCACTGAAACCACGCTCATCCCAGCCTCATGTGCCAAGCCT  942

seq1  TCTATGAAATAAACACTTGTTTCAGGAACTCCGACCCCTCATGTCCTCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAAATAAACACTTGTTTCAGGAACTCCGACCCCTCATGTCCTCTT  992

seq1  CTCCTTTCCTTGCTTCTCCCATTTCCTGATCTAGTGCTCCCAAGACTTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCCTTGCTTCTCCCATTTCCTGATCTAGTGCTCCCAAGACTTTG  1042

seq1  ATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGAAACTGTCTAGCACTGAAGAGAATTGCAACTGGACGAGTAAT  1092

seq1  CCAGCAGAGGCCATTTCTAAATAGGAATTC  1127
      ||||||||||||||||||||||||||||||
seq2  CCAGCAGAGGCCATTTCTAAATAGGAATTC  1122