BAC Information

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BAC

Clone NameB6Ng01-193A13
Chromosome7 (Build37)
Map Location 87,292,806 - 87,438,282
singlet/doubletdoublet
Overlap geneSema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b
Upstream geneMfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2
Downstream genePrc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193A13.bB6Ng01-193A13.g
ACCGA016117GA016118
length404145
definitionB6Ng01-193A13.b B6Ng01-193A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,437,873 - 87,438,282)(87,292,806 - 87,292,950)
sequence
tcctttgcgaagaggtacttattaacctatcttctgcaccaaactttacc
tggagtatccttgttacccacagcactggtgattagcaatgcgcttttaa
accactagcttccatctataggcccaaaataaaacaaaatctagtttata
ctgaattataactaaaattgtctgcttttctgtattggtcaactgtacca
tctataagagtctcattatttgcttctcttttttatgataaatacattta
ttaaatttgtgtgtgtatatggggtggtcatgtgtggagaatagagggca
acttaaaagattcagttttctcctcccactgcatgggtctaggaagtaga
atccaaagctgtgattctcaaaatgtgggtcttgagccctttgggggggg
gggg
atggcatgcctcttgcttcagcttcctgggtgctgggattacaaacacat
gcctctcaacaaaggcagacatgaattttgagagatacaatttagcctat
aacatgttacatgtttgtaactgcaaaagaacaaacgccaccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87437873_87438282
seq2: B6Ng01-193A13.b_40_449 (reverse)

seq1  CCCCCCCCCCCCAAAGGGCTCAAGACCCACATTTTGAGAATCACAGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCAAAGGGCTCAAGACCCACATTTTGAGAATCACAGCTTT  50

seq1  GGATTCTACTTCCTAGACCCATGCAGTGGGAGGAGAAAACTGAATCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTACTTCCTAGACCCATGCAGTGGGAGGAGAAAACTGAATCTTTT  100

seq1  AAGTTGCCCTCTATTCTCCACACATGACCACCCCATATACACACACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCCCTCTATTCTCCACACATGACCACCCCATATACACACACAAAT  150

seq1  TTAATAAATGTATTTATCATAAAAAAGAGAAGCAAATAATGAGACTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATGTATTTATCATAAAAAAGAGAAGCAAATAATGAGACTCTTA  200

seq1  TAGATGGTACAGTTGACCAATACAGAAAAGCAGACAATTTTAGTTATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGTACAGTTGACCAATACAGAAAAGCAGACAATTTTAGTTATAAT  250

seq1  TCAGTATAAACTAGATTTTGTTTTATTTTGGGCCTATAGATGGAAGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATAAACTAGATTTTGTTTTATTTTGGGCCTATAGATGGAAGCTAG  300

seq1  TGGTTTAAAAGCGCATTGCTAATCACCAGTGCTGTGGGTAACAAGGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAAAAGCGCATTGCTAATCACCAGTGCTGTGGGTAACAAGGATAC  350

seq1  TCCAGGTAAAGTTTGGTGCAGAAGATAGGTTAATAAGTACCTCTTCGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTAAAGTTTGGTGCAGAAGATAGGTTAATAAGTACCTCTTCGCAA  400

seq1  AGGAGAATTC  410
      ||||||||||
seq2  AGGAGAATTC  410

seq1: chr7_87292806_87292950
seq2: B6Ng01-193A13.g_73_217

seq1  ATGGCATGCCTCTTGCTTCAGCTTCCTGGGTGCTGGGATTACAAACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATGCCTCTTGCTTCAGCTTCCTGGGTGCTGGGATTACAAACACAT  50

seq1  GCCTCTCAACAAAGGCAGACATGAATTTTGAGAGATACAATTTAGCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCAACAAAGGCAGACATGAATTTTGAGAGATACAATTTAGCCTAT  100

seq1  AACATGTTACATGTTTGTAACTGCAAAAGAACAAACGCCACCCCC  145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTACATGTTTGTAACTGCAAAAGAACAAACGCCACCCCC  145