BAC Information

Click to search

BAC

Clone NameB6Ng01-193F03
Chromosome7 (Build37)
Map Location 140,591,616 - 140,592,655
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik, Zranb1, Ctbp2
Downstream geneLOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12, A130023I24Rik, 4933400E14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193F03.bB6Ng01-193F03.g
ACCGA016324GA016325
length1,0791,040
definitionB6Ng01-193F03.b B6Ng01-193F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctctagttgagtctagctaagggcttatct
atcttgttgattttctcaaagaacccaactcctcgtttgggttaattctt
tgaatagttcttcttgtttccacttggtttaatttcaccccctgagtttg
attatttcctgccgtcttactcctcttgggtgaatttgctttcctttttt
tctagagctttttagatgtgtgtcagctgctagatagtgctctctcccgg
ttcttcttggagtactcaaagctatgaagtttccctcttagaaatgcttt
catgggtcaaagggttgggtcgttgaggctcatttacttaacttaaaggt
ctttaaatctttcttaattcttcctggac
gaattcagtccttcctagtttcaacaggaggacacttaaaggatccagca
ggacttggcacagattctggggcttttggtgttcagccaggaaggtggga
tagaataaagacaaatcggaaggcatcccaacagtgatcgttccaaagga
tctggccatgactgccagaggatggtgccaacaagatgcagaggctacag
aagcagctgaaaaggagctgtcaggacaaacgggtggacttccagacttc
catgcagagatggaatcctgggctgcacaagtagctaaagtaggaaaatg
aaggcaaatgtcttgagccctagtgcggccacggagagagggctggagct
gagagtctccatgcatgcagacttcctgttcaagcacaaaggcttctggg
acatgatactacgatgagccaatggaggcaagagctgaagtccaagacta
gaggacagccaggcagagttggagacttccctgcttctgacaggcttagc
atagacagtagggtacaccaccacgtcacacaacctctagtcccatctcc
cactgaagtctttgagtgctgtccctcagacccgtttccaccatccacac
catccaacagagcattgccagggaggccttcggcagcattgctggatctc
ggttcctgtcagtgggatacgtaactgctgaagcctgggggcgtgaagaa
ggagccagaattgtggcatcatccttctgcactgcccacttctaagtcac
cagatgtcacgtttctaatacttccgcttgtctggccatgctggaaagaa
gaacaaggactatttgggacatggaaaggtggtgtcacgtcctacaggtg
tcatgtcctacagacagctcctctacagagtgaactagcagattgagacg
cctgcttcctgttgcaaactttagtcaagctttacttctgacccagacac
caccgctgtcttgtgcttccattataaacaggaactgagttacagacatt
tgtatcactttgcatttcttctgtagtgggctttcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_140591616_140592655
seq2: B6Ng01-193F03.g_65_1104 (reverse)

seq1  AAAAAGAAAGCCAAACTACAGAAGAAATGCAAAGTGATAACAAATGTCTG  50
      ||||||||||||  |||||||||||||||||||||||| |||||||||||
seq2  AAAAAGAAAGCC-CACTACAGAAGAAATGCAAAGTGAT-ACAAATGTCTG  48

seq1  TTACCTCAGTCCCTG-TTATAATGGAAGCACAAGACAGCGGT-GTGTCTG  98
       || |||||| |||| |||||||||||||||||||||||||| |||||||
seq2  -TAACTCAGTTCCTGTTTATAATGGAAGCACAAGACAGCGGTGGTGTCTG  97

seq1  GGTCAGAAGT-AAGCCTGACTAAAGTTTGCAACAGGAAGCAGGCGTCTCA  147
      |||||||||| |||| ||||||||||||||||||||||||||||||||||
seq2  GGTCAGAAGTAAAGCTTGACTAAAGTTTGCAACAGGAAGCAGGCGTCTCA  147

seq1  ATCTGCTAGTTCACTCTGTAGAGGAGCTGTCTGTAGGACATGACACCTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTAGTTCACTCTGTAGAGGAGCTGTCTGTAGGACATGACACCTGT  197

seq1  AGGACGTGACACCACCTTTCCATGTCCCAAATAGTCCTTGTTCTTCTTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGTGACACCACCTTTCCATGTCCCAAATAGTCCTTGTTCTTCTTTC  247

seq1  CAGCATGGCCAGACAAGCGGAAGTATTAGAAACGTGACATCTGGTGACTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGCCAGACAAGCGGAAGTATTAGAAACGTGACATCTGGTGACTT  297

seq1  AGAAGTGGGCAGTGCAGAAGGATGATGCCACAATTCTGGCTCCTTCTTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGGGCAGTGCAGAAGGATGATGCCACAATTCTGGCTCCTTCTTCA  347

seq1  CGCCCCCAGGCTTCAGCAGTTACGTATCCCACTGACAGGAACCGAGATCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCCAGGCTTCAGCAGTTACGTATCCCACTGACAGGAACCGAGATCC  397

seq1  AGCAATGCTGCCGAAGGCCTCCCTGGCAATGCTCTGTTGGATGGTGTGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGCTGCCGAAGGCCTCCCTGGCAATGCTCTGTTGGATGGTGTGGA  447

seq1  TGGTGGAAACGGGTCTGAGGGACAGCACTCAAAGACTTCAGTGGGAGATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAAACGGGTCTGAGGGACAGCACTCAAAGACTTCAGTGGGAGATG  497

seq1  GGACTAGAGGTTGTGTGACGTGGTGGTGTACCCTACTGTCTATGCTAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGAGGTTGTGTGACGTGGTGGTGTACCCTACTGTCTATGCTAAGC  547

seq1  CTGTCAGAAGCAGGGAAGTCTCCAACTCTGCCTGGCTGTCCTCTAGTCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAAGCAGGGAAGTCTCCAACTCTGCCTGGCTGTCCTCTAGTCTT  597

seq1  GGACTTCAGCTCTTGCCTCCATTGGCTCATCGTAGTATCATGTCCCAGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCAGCTCTTGCCTCCATTGGCTCATCGTAGTATCATGTCCCAGAA  647

seq1  GCCTTTGTGCTTGAACAGGAAGTCTGCATGCATGGAGACTCTCAGCTCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTGCTTGAACAGGAAGTCTGCATGCATGGAGACTCTCAGCTCCA  697

seq1  GCCCTCTCTCCGTGGCCGCACTAGGGCTCAAGACATTTGCCTTCATTTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTCTCCGTGGCCGCACTAGGGCTCAAGACATTTGCCTTCATTTTC  747

seq1  CTACTTTAGCTACTTGTGCAGCCCAGGATTCCATCTCTGCATGGAAGTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTAGCTACTTGTGCAGCCCAGGATTCCATCTCTGCATGGAAGTCT  797

seq1  GGAAGTCCACCCGTTTGTCCTGACAGCTCCTTTTCAGCTGCTTCTGTAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCCACCCGTTTGTCCTGACAGCTCCTTTTCAGCTGCTTCTGTAGC  847

seq1  CTCTGCATCTTGTTGGCACCATCCTCTGGCAGTCATGGCCAGATCCTTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATCTTGTTGGCACCATCCTCTGGCAGTCATGGCCAGATCCTTTG  897

seq1  GAACGATCACTGTTGGGATGCCTTCCGATTTGTCTTTATTCTATCCCACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGATCACTGTTGGGATGCCTTCCGATTTGTCTTTATTCTATCCCACC  947

seq1  TTCCTGGCTGAACACCAAAAGCCCCAGAATCTGTGCCAAGTCCTGCTGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCTGAACACCAAAAGCCCCAGAATCTGTGCCAAGTCCTGCTGGA  997

seq1  TCCTTTAAGTGTCCTCCTGTTGAAACTAGGAAGGACTGAATTC  1040
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAGTGTCCTCCTGTTGAAACTAGGAAGGACTGAATTC  1040