BAC Information

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BAC

Clone NameB6Ng01-193F09
Chromosome7 (Build37)
Map Location 31,819,182 - 31,856,823
singlet/doubletdoublet
Overlap geneFxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3
Upstream geneZfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162
Downstream geneHpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193F09.bB6Ng01-193F09.g
ACCGA016336GA016337
length5481,129
definitionB6Ng01-193F09.b B6Ng01-193F09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,856,270 - 31,856,823)(31,819,182 - 31,820,311)
sequence
tatacctcaatcttttgtgtttccagcttccatcaggagctgcaccttgc
cccatcccctctctttctccactggccctcatccctgttccagctcagga
ctttcgcacctacaggtccttctccctggaccgttttcttccatgtttcc
aggaccacctctgccttgctgcagatctctggtccaacgggacctcctca
gagagcccttggctgatcactctctctaacgaccacccccttgacttccc
atcctgatccttccccccccccccccccatggacatgagatatcttgttt
gcttggatatgaactgcaatgcttgcacaaagggcctgggtttgcttttc
tcttttactgccgtcaagtgagttgggagatagggaagaaggagctgggc
tagctttgaggtcccctttgtctccctctcagattggtacagcctccgag
tcggcgggctcatttgtgcagggattctctgtgccctgggcattatagtc
cttatgagtgagtacttgggagctctgggagggagggagggagggagg
gaattcaggtcctcaagcaagcactttgcccaccaatacctcctaaaccc
atggatctcttcttaagctataaacgcttccagaaattgattccagtccg
gtatttggtcacaatgagaacagcaacccgcagagctctcgtgaataaaa
gaagtcaggtccagagggctgtggttcggttgtgcttgcctggcatgtac
aatgtgatggggttgactccctgtgctgcattaactgcctatacctataa
ctaagcacttgggaggtagaggcaggagggtcagaagttcaaggttaagg
tggaagaggtggttcagtggttactcacatccagctcctaccatctatct
aaggagactcacatcgtctgaaactcccagctccagggtatccaactctc
ttccatctgtcatggcctctgcactcacacacacatacacacacacacac
acacacacacacacacacacagattcaaggccatctttggtcgacatgct
cctctgtctcaaaacaaaataaacccaaaaactgctgatcagcttggcac
acctataacctcaagcctcaggaggctgaagcaggaggattgtgagtttg
acgccagcctgagcaacacagtgagaccctgtcttaaaaggatgaatgaa
gtcctgttttctcttctcacaaatgaagccgacccttggcttgtaaagaa
gcataacgtagtatccactagcagtcatctgagtctgcatatctctgtcc
tgtgtgtctctgtatcgctcatcggggcactaccacgtgaccgagcccag
gaagaaaaggacaacagaggaagagacgtgcactctaggaacagcgcccc
ctgctgcaaccagaacaaccgcccagctggatgcaaccagcaggctagcc
gagaatcatccctgggggtggtttgtaagggtgctgagtttgcacagctt
ttgcccaaggggttcaaggaccctgaatcctcagttcaccatgtcagcca
ggcctgtccccagccccgtcttgcccttttctgacatgcgaactcttctt
agtgtgagaatgatattccgttgattgaacagcacggcagccacagcagt
ccgtcgtaggttagtatcatctgtaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_31856270_31856823
seq2: B6Ng01-193F09.b_46_599 (reverse)

seq1  CCTCCCTCCCTCCCTCCCTCCCAGAGCTCCCAAGTACTCACTCATAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCCCTCCCTCCCAGAGCTCCCAAGTACTCACTCATAAGGA  50

seq1  CTATAATGCCCAGGGCACAGAGAATCCCTGCACAAATGAGCCCGCCGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATGCCCAGGGCACAGAGAATCCCTGCACAAATGAGCCCGCCGACT  100

seq1  CGGAGGCTGTACCAATCTGAGAGGGAGACAAAGGGGACCTCAAAGCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCTGTACCAATCTGAGAGGGAGACAAAGGGGACCTCAAAGCTAGC  150

seq1  CCAGCTCCTTCTTCCCTATCTCCCAACTCACTTGACGGCAGTAAAAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCCTTCTTCCCTATCTCCCAACTCACTTGACGGCAGTAAAAGAGA  200

seq1  AAAGCAAACCCAGGCCCTTTGTGCAAGCATTGCAGTTCATATCCAAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAACCCAGGCCCTTTGTGCAAGCATTGCAGTTCATATCCAAGCAA  250

seq1  ACAAGATATCTCATGTCCATGGGGGGGGGGGGGGGGAAGGATCAGGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATATCTCATGTCCATGGGGGGGGGGGGGGGGAAGGATCAGGATGG  300

seq1  GAAGTCAAGGGGGTGGTCGTTAGAGAGAGTGATCAGCCAAGGGCTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAAGGGGGTGGTCGTTAGAGAGAGTGATCAGCCAAGGGCTCTCTG  350

seq1  AGGAGGTCCCGTTGGACCAGAGATCTGCAGCAAGGCAGAGGTGGTCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTCCCGTTGGACCAGAGATCTGCAGCAAGGCAGAGGTGGTCCTGG  400

seq1  AAACATGGAAGAAAACGGTCCAGGGAGAAGGACCTGTAGGTGCGAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGAAGAAAACGGTCCAGGGAGAAGGACCTGTAGGTGCGAAAGTC  450

seq1  CTGAGCTGGAACAGGGATGAGGGCCAGTGGAGAAAGAGAGGGGATGGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGGAACAGGGATGAGGGCCAGTGGAGAAAGAGAGGGGATGGGGC  500

seq1  AAGGTGCAGCTCCTGATGGAAGCTGGAAACACAAAAGATTGAGGTATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCAGCTCCTGATGGAAGCTGGAAACACAAAAGATTGAGGTATAGA  550

seq1  ATTC  554
      ||||
seq2  ATTC  554

seq1: chr7_31819182_31820311
seq2: B6Ng01-193F09.g_65_1193

seq1  GAATTCAGGTCCTCAAGCAAGCACTTTGCCCACCAATACCTCCTAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCTCAAGCAAGCACTTTGCCCACCAATACCTCCTAAACCC  50

seq1  ATGGATCTCTTCTTAAGCTATAAACGCTTCCAGAAATTGATTCCAGTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCTCTTCTTAAGCTATAAACGCTTCCAGAAATTGATTCCAGTCCG  100

seq1  GTATTTGGTCACAATGAGAACAGCAACCCGCAGAGCTCTCGTGAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGTCACAATGAGAACAGCAACCCGCAGAGCTCTCGTGAATAAAA  150

seq1  GAAGTCAGGTCCAGAGGGCTGTGGTTCGGTTGTGCTTGCCTGGCATGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGGTCCAGAGGGCTGTGGTTCGGTTGTGCTTGCCTGGCATGTAC  200

seq1  AATGTGATGGGGTTGACTCCCTGTGCTGCATTAACTGCCTATACCTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATGGGGTTGACTCCCTGTGCTGCATTAACTGCCTATACCTATAA  250

seq1  CTAAGCACTTGGGAGGTAGAGGCAGGAGGGTCAGAAGTTCAAGGTTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCACTTGGGAGGTAGAGGCAGGAGGGTCAGAAGTTCAAGGTTAAGG  300

seq1  TGGAAGAGGTGGTTCAGTGGTTACTCACATCCAGCTCCTACCATCTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGGTGGTTCAGTGGTTACTCACATCCAGCTCCTACCATCTATCT  350

seq1  AAGGAGACTCACATCGTCTGAAACTCCCAGCTCCAGGGTATCCAACTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACTCACATCGTCTGAAACTCCCAGCTCCAGGGTATCCAACTCTC  400

seq1  TTCCATCTGTCATGGCCTCTGCACTCACACACACATACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTGTCATGGCCTCTGCACTCACACACACATACACACACACACAC  450

seq1  ACACACACACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACAGATTCAAGGCCATCTTTGGTCGACATGCT  500

seq1  CCTCTGTCTCAAAACAAAATAAACCCAAAAACTGCTGATCAGCTTGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTCAAAACAAAATAAACCCAAAAACTGCTGATCAGCTTGGCAC  550

seq1  ACCTATAACCTCAAGCCTCAGGAGGCTGAAGCAGGAGGATTGTGAGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAACCTCAAGCCTCAGGAGGCTGAAGCAGGAGGATTGTGAGTTTG  600

seq1  ACGCCAGCCTGAGCAACACAGTGAGACCCTGTCTTAAAAGGATGAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCAGCCTGAGCAACACAGTGAGACCCTGTCTTAAAAGGATGAATGAA  650

seq1  GTCCTGTTTTCTCTTCTCACAAATGAAGCCGACCCTTGGCTTGTAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTTTTCTCTTCTCACAAATGAAGCCGACCCTTGGCTTGTAAAGAA  700

seq1  GCATAACGTAGTATCCACTAGCAGTCATCTGAGTCTGCATATCTCTGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAACGTAGTATCCACTAGCAGTCATCTGAGTCTGCATATCTCTGTCC  750

seq1  TGTGTGTCTCTGTATCGCTCATCGGGGCACTACCACGTGACCGAGCCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTCTGTATCGCTCATCGGGGCACTACCACGTGACCGAGCCCAG  800

seq1  GAAGAAAAGGACAACAGAGGAAGAGACGTGCACTCTAGGAACAGCGCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAGGACAACAGAGGAAGAGACGTGCACTCTAGGAACAGCGCCCC  850

seq1  CTGCTGCAACCAGAACAACCGCCCAGCTGGATGCAACCAGCAGGCTAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGCTGCAACCAGAACAACCGCCCAGCTGGATGCAACCAGCAGGCTA-GC  899

seq1  CGAGAATCATCCCT-GGGGTGGTTTGTAGGGGTGCTGAGTTTGCACAGC-  948
      |||||||||||||| ||||||||||||| |||||||||||||||||||| 
seq2  CGAGAATCATCCCTGGGGGTGGTTTGTAAGGGTGCTGAGTTTGCACAGCT  949

seq1  TTTGCCCAGGGGGTTTCAAGACCCTG-ATCCTCAG-TCACCATG-CAGCC  995
      |||||||| ||||||  | ||||||| |||||||| |||||||| |||||
seq2  TTTGCCCAAGGGGTTCAAGGACCCTGAATCCTCAGTTCACCATGTCAGCC  999

seq1  CAGCCCGCCCCCAGCCCCTTCTTGCCC-TTTCTGCCCATGCCCGACTCTC  1044
        ||| | |||||||||| |||||||| ||||||  |||| |  ||||| 
seq2  AGGCCTGTCCCCAGCCCCGTCTTGCCCTTTTCTG-ACATG-CGAACTCTT  1047

seq1  ACTA--GTGAGAATGATAATTCCCGTGA-TGAACAGCACCGCAGCCACCA  1091
        ||  ||||||||||| |||||  ||| |||||||||| ||||||| ||
seq2  CTTAGTGTGAGAATGAT-ATTCCGTTGATTGAACAGCACGGCAGCCA-CA  1095

seq1  GCAGTCCCCGTTTCCGGAGGGTAGTATCATCTGTGAAGA  1130
      |||||  ||||   || ||| ||||||||||||| ||||
seq2  GCAGT--CCGT---CGTAGGTTAGTATCATCTGTAAAGA  1129