BAC Information

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BAC

Clone NameB6Ng01-194D07
Chromosome7 (Build37)
Map Location 27,426,499 - 27,427,556
singlet/doubletsinglet
Overlap genenone
Upstream geneBckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12
Downstream geneEG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194D07.bB6Ng01-194D07.g
ACCGA016963GA016964
length1,0591,071
definitionB6Ng01-194D07.b B6Ng01-194D07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagcctaagctatttatctttctccagaaagatttctgcctcc
caagtgttgggattagaccgggagtcaaactttcctttttttttttttaa
tatgattctaggttctgagcttggtgaagtgggtgaaaatttagtttctc
agagctgtgttgagagctatctgctgatagccaacggctgccaagagaca
gctttctaggctggtgttgtcctttaccgagttgtttgttctttttctta
cactactttaagcacatggcaccaggcacttgtagttccaggatctcaca
aaggaaaggtgaacaaggcagcaggttgttcctttcactaacctggcatg
aatgtgatggtgtttgcagcatagtgccatcctggaactatccgtaggta
cctatcaggaggccacatgagaaaatatcaaggaggtcaggggcctgggc
atctcttgggtattacctagactgaatctggcattacctagaacttaagc
tgctagcattcttatgatagggtttcttatattatttgaagcaggaagac
tactcaaagaatagatacaccagctaccccattggcacatatgatacact
aacccctaccattttatctaacttcactcaaagaagtacaggagatgtga
tgctattcatatacacaggcagaaaggccaacttcactaatggaactcaa
ttaatcatgactggaacgaggattttgggactcagaggtaaatgtgtata
gttagtctccattcttcaccttccccctggtcaccattctgactctgagc
ttatagttaactccaagtggcaagaaagggaagaaaaaggttgagagatt
gcctgtgtggattcacaacttccacacattccactcccatctgccagtct
tcctccatcctttctcagacttctaggttctgtggtgtttcagaggccat
cagaaccctgctgcttgctgtctttgtatgcaaggtcagtcattgaccct
gtggtttgaaccgctgtgtctgacaacaatgttgaagccatttgttggcc
tttccctgg
gaattccccagtactggaccatagagccttgacaggaccaaggacctctc
ttcccattgctgaacaactaggccatcctctgttacatatgcagctagag
ccacaagtccctccatgtgctttctttggttggtggtttagtcccaggga
gctctgaagatactggttagtttatattgttgttcctcctatggggctgt
aaaccccatcagccccttgggtgctttctcaagctcctccattggggact
ctgtgctccttccaatggatgtctgtgagcatctacttctctatttatca
gacacaggcagagtctctcaggagacatctatatcagactcttgtcagca
agctcttgttggcgtccacaatagtgtctggttttggtggttgtttttgg
aatggatccccaggtagagcagtcactggatggtcgttccttctgtctct
gcttcacactttgtctctgtaactccgtccatgtggattttgttccctat
tctaagaaggatcaaagtatccacactttagccttccttcttctcaagtt
tcatatgttttgcgaatgaggtgctactcagccattcggtattcctcagt
agagaattctttgtttagctctgcaccccattttaattgggttatttggt
tctctggaatctagcttcttgtgttctttctatatattggatagtagccc
tctattggatttaggattggtaaagatcttttcccaatctgttggttgcc
tgtttgtcttattgacagtgtcctttgcccttaaagaagtttttgcaatt
ttatgaggtcccatttgtcaattcttgatcttacagccacaagccattgg
atgttcttgttcagatatttttcccctgtgcatgtatcttttgaggcttt
tccctacctttcacctctatgagtttcagtgtctctgggttttatgtgga
gttccttgattccgtttagctttgtccaaggagaataagattggatcaat
ttcttctaccatgataaccacccagtggtactcagccccattttgtagaa
aatgggtgtctttcccccata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_27426499_27427556
seq2: B6Ng01-194D07.b_44_1102 (reverse)

seq1  CCAGGAAAAGGCCAAC-AATGGC-TCAACATTGTTGTCAGACAACAGCCG  48
      ||||| |||||||||| |||||| |||||||||||||||||| ||||| |
seq2  CCAGGGAAAGGCCAACAAATGGCTTCAACATTGTTGTCAGAC-ACAGCGG  49

seq1  TTCAACCACCAGGGTCAATGACTGAACCTGGCATACAAAGACAGCAGGCA  98
      ||||| |  ||||||||||||||| |||| |||||||||||||||| |||
seq2  TTCAAACCACAGGGTCAATGACTG-ACCTTGCATACAAAGACAGCAAGCA  98

seq1  GCA-GGTTCTGATGGCCTCTGAAACACCACAGAACCTAGAAGTCTGAGAA  147
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTTCTGATGGCCTCTGAAACACCACAGAACCTAGAAGTCTGAGAA  148

seq1  AGGATGGAGGAAGACTGGCAGATGGGAGTGGAATGTGTGGAAGTTGTGAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGAGGAAGACTGGCAGATGGGAGTGGAATGTGTGGAAGTTGTGAA  198

seq1  TCCACACAGGCAATCTCTCAACCTTTTTCTTCCCTTTCTTGCCACTTGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACAGGCAATCTCTCAACCTTTTTCTTCCCTTTCTTGCCACTTGGA  248

seq1  GTTAACTATAAGCTCAGAGTCAGAATGGTGACCAGGGGGAAGGTGAAGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTATAAGCTCAGAGTCAGAATGGTGACCAGGGGGAAGGTGAAGAA  298

seq1  TGGAGACTAACTATACACATTTACCTCTGAGTCCCAAAATCCTCGTTCCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACTAACTATACACATTTACCTCTGAGTCCCAAAATCCTCGTTCCA  348

seq1  GTCATGATTAATTGAGTTCCATTAGTGAAGTTGGCCTTTCTGCCTGTGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGATTAATTGAGTTCCATTAGTGAAGTTGGCCTTTCTGCCTGTGTA  398

seq1  TATGAATAGCATCACATCTCCTGTACTTCTTTGAGTGAAGTTAGATAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATAGCATCACATCTCCTGTACTTCTTTGAGTGAAGTTAGATAAAA  448

seq1  TGGTAGGGGTTAGTGTATCATATGTGCCAATGGGGTAGCTGGTGTATCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGGGTTAGTGTATCATATGTGCCAATGGGGTAGCTGGTGTATCTA  498

seq1  TTCTTTGAGTAGTCTTCCTGCTTCAAATAATATAAGAAACCCTATCATAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGTAGTCTTCCTGCTTCAAATAATATAAGAAACCCTATCATAA  548

seq1  GAATGCTAGCAGCTTAAGTTCTAGGTAATGCCAGATTCAGTCTAGGTAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTAGCAGCTTAAGTTCTAGGTAATGCCAGATTCAGTCTAGGTAAT  598

seq1  ACCCAAGAGATGCCCAGGCCCCTGACCTCCTTGATATTTTCTCATGTGGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAGATGCCCAGGCCCCTGACCTCCTTGATATTTTCTCATGTGGC  648

seq1  CTCCTGATAGGTACCTACGGATAGTTCCAGGATGGCACTATGCTGCAAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGATAGGTACCTACGGATAGTTCCAGGATGGCACTATGCTGCAAAC  698

seq1  ACCATCACATTCATGCCAGGTTAGTGAAAGGAACAACCTGCTGCCTTGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCACATTCATGCCAGGTTAGTGAAAGGAACAACCTGCTGCCTTGTT  748

seq1  CACCTTTCCTTTGTGAGATCCTGGAACTACAAGTGCCTGGTGCCATGTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTCCTTTGTGAGATCCTGGAACTACAAGTGCCTGGTGCCATGTGC  798

seq1  TTAAAGTAGTGTAAGAAAAAGAACAAACAACTCGGTAAAGGACAACACCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAGTGTAAGAAAAAGAACAAACAACTCGGTAAAGGACAACACCA  848

seq1  GCCTAGAAAGCTGTCTCTTGGCAGCCGTTGGCTATCAGCAGATAGCTCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGAAAGCTGTCTCTTGGCAGCCGTTGGCTATCAGCAGATAGCTCTC  898

seq1  AACACAGCTCTGAGAAACTAAATTTTCACCCACTTCACCAAGCTCAGAAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCTCTGAGAAACTAAATTTTCACCCACTTCACCAAGCTCAGAAC  948

seq1  CTAGAATCATATTAAAAAAAAAAAAAGGAAAGTTTGACTCCCGGTCTAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATCATATTAAAAAAAAAAAAAGGAAAGTTTGACTCCCGGTCTAAT  998

seq1  CCCAACACTTGGGAGGCAGAAATCTTTCTGGAGAAAGATAAATAGCTTAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACACTTGGGAGGCAGAAATCTTTCTGGAGAAAGATAAATAGCTTAG  1048

seq1  GCTGTGAATTC  1058
      |||||||||||
seq2  GCTGTGAATTC  1059