BAC Information

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BAC

Clone NameB6Ng01-194K08
Chromosome7 (Build37)
Map Location 135,375,821 - 135,536,422
singlet/doubletdoublet
Overlap geneLOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10
Upstream geneLOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2
Downstream geneLOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194K08.bB6Ng01-194K08.g
ACCGA017282GA017283
length952899
definitionB6Ng01-194K08.b B6Ng01-194K08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,535,477 - 135,536,422)(135,375,821 - 135,376,717)
sequence
gaattcacttctcttaaacctgcgctggttgggagcagggtttcaggctg
acttcctacccagtgtgggtgcaaaccaggcttcatagcacctgcaggaa
gggccctgacctgtgcctggaaggagccgagaccggatacatctatctgt
ctgtctcagggaagggagggctgtggtggaggcagtggctaggtgcatat
gccagcactttcacacactcagaactgactccaccaagggagctagtctg
ttcttattcttacagcggcggcggcggctagaacagggttaacaaaactc
tggaaaattctaccagaatagctcaagcgagcagttcttcttttctgttc
aagtctcggcctggacaccaggccttcccgtgactggcctgtggtcagct
gtctcagggtttcccttttcggtcacacttcctatcctagcgcagataag
cctgctcactcattctcctgtacccactgggtcagcccaggggcgcaccc
tgtcctcagtggctggggaaggacagctgattcgagagggctggttgata
gtgccccctccccccacacctgcttcctctcccttgggccacctgccccc
acatatggagcctcaagctgctcacttctgtgtctcattttcagaactcc
cccaagagagcctgagttcatgggagccatgtgtgtgcatgcgtgcatgg
cagaacagctgtgtggatgtcttaggaggggagacctgcagactgttgca
cgcagttcgctcatctggccactgaaattctactttcatgaagtaacttt
taaacaggaagtgggtttccaaaaatgttcccttctgacagatggggatt
tgtggaagacactcatgggctctgtggaacttggtgggtccttgaaatac
attgaagtttcaaaactgctcttccggggtcaggcctccatgatggtccc
cc
gaattcatccctccacactctggaccctccaataaatctcttttatgaga
tttgctgtccggtgtgactctctcatcggaagaagcctagaagcaatgaa
aagaagcagcaaagaagtggggtgtggatcctgagctcagttggggatac
cctcccctgggagctgcaatgcctctgttgaggctttctctcagagctat
gtggcttctgctccaccccaccctcagtgtctcaggatgcctttccactg
ggatacctttcccattcacagctggcttctgagtcccaggagacctccca
tctgagcagaaacacagatgggaacaccttactagaacatatggctggct
gaaaactcaagagatctgcttgattgtccccaggagtattgggattagaa
gtatgtacaaccatgtctgacatgaaactcttgctggccttgcatctgca
aggccataaaattctgtttccaattactgcctgaatctgagcatgtctgg
agatttacctatttcctcccttgaaaatatgagccctgggacacacagct
ttggagctgaagtagaggatgggcatgtctattctaagccagcccaccct
catcctttcctcaaactggcttttttctcccctacttccctaggaaatgg
atccaaatcctaaagagaaattgtaaatcatatggcctttcttcagagct
gtctggcctctggatgggattgctggaactcagcagggccttctacagta
tgcctaggggaatgatctgggaatggagtaagcacacctccccaaagtcc
ttgcctcaccagatgagcttatagataatccagactccaattgccaggca
cagccacactcatcacacaacattgggtttctatataccttagtaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135535477_135536422
seq2: B6Ng01-194K08.b_42_992 (reverse)

seq1  GGGGACCATCAT-GAGGCCTG-CCCCGGAAGAGCAG-TTTGGAACTTC-A  46
      |||||||||||| |||||||| |||||||||||||| |||| |||||| |
seq2  GGGGACCATCATGGAGGCCTGACCCCGGAAGAGCAGTTTTGAAACTTCAA  50

seq1  TGTCTCTCAAAGACCCACC-AGTTCCACAGAG-CCATGAGTGTCTTCCAC  94
      ||| | |||| |||||||| |||||||||||| |||||||||||||||||
seq2  TGTATTTCAAGGACCCACCAAGTTCCACAGAGCCCATGAGTGTCTTCCAC  100

seq1  -CATCCCCATTCTGTCAGAAGGGAACATTTTTGGAAACCCACTTCCTGTT  143
        ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCCA-TCTGTCAGAAGGGAACATTTTTGGAAACCCACTTCCTGTT  149

seq1  TTAAAGTTACTTCATGAAAGTAGAATTTCAGTTGGCCAGATGAGCGAACT  193
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAAAAGTTACTTCATGAAAGTAGAATTTCAG-TGGCCAGATGAGCGAACT  198

seq1  GCGTGCAACAGTCTGCAGGTCTCCCCTCCTAAGACATCCACACAGCTGTT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCAACAGTCTGCAGGTCTCCCCTCCTAAGACATCCACACAGCTGTT  248

seq1  CTGCCATGCACGCATGCACACACATGGCTCCCATGAACTCAGGCTCTCTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATGCACGCATGCACACACATGGCTCCCATGAACTCAGGCTCTCTT  298

seq1  GGGGGAGTTCTGAAAATGAGACACAGAAGTGAGCAGCTTGAGGCTCCATA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGTTCTGAAAATGAGACACAGAAGTGAGCAGCTTGAGGCTCCATA  348

seq1  TGTGGGGGCAGGTGGCCCAAGGGAGAGGAAGCAGGTGTGGGGGGAGGGGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGGCAGGTGGCCCAAGGGAGAGGAAGCAGGTGTGGGGGGAGGGGG  398

seq1  CACTATCAACCAGCCCTCTCGAATCAGCTGTCCTTCCCCAGCCACTGAGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCAACCAGCCCTCTCGAATCAGCTGTCCTTCCCCAGCCACTGAGG  448

seq1  ACAGGGTGCGCCCCTGGGCTGACCCAGTGGGTACAGGAGAATGAGTGAGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGCGCCCCTGGGCTGACCCAGTGGGTACAGGAGAATGAGTGAGC  498

seq1  AGGCTTATCTGCGCTAGGATAGGAAGTGTGACCGAAAAGGGAAACCCTGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTATCTGCGCTAGGATAGGAAGTGTGACCGAAAAGGGAAACCCTGA  548

seq1  GACAGCTGACCACAGGCCAGTCACGGGAAGGCCTGGTGTCCAGGCCGAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGACCACAGGCCAGTCACGGGAAGGCCTGGTGTCCAGGCCGAGA  598

seq1  CTTGAACAGAAAAGAAGAACTGCTCGCTTGAGCTATTCTGGTAGAATTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACAGAAAAGAAGAACTGCTCGCTTGAGCTATTCTGGTAGAATTTT  648

seq1  CCAGAGTTTTGTTAACCCTGTTCTAGCCGCCGCCGCCGCTGTAAGAATAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTTTGTTAACCCTGTTCTAGCCGCCGCCGCCGCTGTAAGAATAA  698

seq1  GAACAGACTAGCTCCCTTGGTGGAGTCAGTTCTGAGTGTGTGAAAGTGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACTAGCTCCCTTGGTGGAGTCAGTTCTGAGTGTGTGAAAGTGCT  748

seq1  GGCATATGCACCTAGCCACTGCCTCCACCACAGCCCTCCCTTCCCTGAGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATGCACCTAGCCACTGCCTCCACCACAGCCCTCCCTTCCCTGAGA  798

seq1  CAGACAGATAGATGTATCCGGTCTCGGCTCCTTCCAGGCACAGGTCAGGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGATAGATGTATCCGGTCTCGGCTCCTTCCAGGCACAGGTCAGGG  848

seq1  CCCTTCCTGCAGGTGCTATGAAGCCTGGTTTGCACCCACACTGGGTAGGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTGCAGGTGCTATGAAGCCTGGTTTGCACCCACACTGGGTAGGA  898

seq1  AGTCAGCCTGAAACCCTGCTCCCAACCAGCGCAGGTTTAAGAGAAGTGAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCTGAAACCCTGCTCCCAACCAGCGCAGGTTTAAGAGAAGTGAA  948

seq1  TTC  946
      |||
seq2  TTC  951

seq1: chr7_135375821_135376717
seq2: B6Ng01-194K08.g_66_964

seq1  GAATTCATCCCTCCACACTCTGGACCCTCCAATAAATCTCTTTTATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCTCCACACTCTGGACCCTCCAATAAATCTCTTTTATGAGA  50

seq1  TTTGCTGTCCGGTGTGACTCTCTCATCGGAAGAAGCCTAGAAGCAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTCCGGTGTGACTCTCTCATCGGAAGAAGCCTAGAAGCAATGAA  100

seq1  AAGAAGCAGCAAAGAAGTGGGGTGTGGATCCTGAGCTCAGTTGGGGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAGCAAAGAAGTGGGGTGTGGATCCTGAGCTCAGTTGGGGATAC  150

seq1  CCTCCCCTGGGAGCTGCAATGCCTCTGTTGAGGCTTTCTCTCAGAGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTGGGAGCTGCAATGCCTCTGTTGAGGCTTTCTCTCAGAGCTAT  200

seq1  GTGGCTTCTGCTCCACCCCACCCTCAGTGTCTCAGGATGCCTTTCCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTCTGCTCCACCCCACCCTCAGTGTCTCAGGATGCCTTTCCACTG  250

seq1  GGATACCTTTCCCATTCACAGCTGGCTTCTGAGTCCCAGGAGACCTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCTTTCCCATTCACAGCTGGCTTCTGAGTCCCAGGAGACCTCCCA  300

seq1  TCTGAGCAGAAACACAGATGGGAACACCTTACTAGAACATATGGCTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCAGAAACACAGATGGGAACACCTTACTAGAACATATGGCTGGCT  350

seq1  GAAAACTCAAGAGATCTGCTTGATTGTCCCCAGGAGTATTGGGATTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCAAGAGATCTGCTTGATTGTCCCCAGGAGTATTGGGATTAGAA  400

seq1  GTATGTACAACCATGTCTGACATGAAACTCTTGCTGGCCTTGCATCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTACAACCATGTCTGACATGAAACTCTTGCTGGCCTTGCATCTGCA  450

seq1  AGGCCATAAAATTCTGTTTCCAATTACTGCCTGAATCTGAGCATGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATAAAATTCTGTTTCCAATTACTGCCTGAATCTGAGCATGTCTGG  500

seq1  AGATTTACCTATTTCCTCCCTTGAAAATATGAGCCCTGGGACACACAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACCTATTTCCTCCCTTGAAAATATGAGCCCTGGGACACACAGCT  550

seq1  TTGGAGCTGAAGTAGAGGATGGGCATGTCTATTCTAAGCCAGCCCACCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTGAAGTAGAGGATGGGCATGTCTATTCTAAGCCAGCCCACCCT  600

seq1  CATCCTTTCCTCAAACTGGCTTTTTTCTCCCCTACTTCCCTAGGAAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTCCTCAAACTGGCTTTTTTCTCCCCTACTTCCCTAGGAAATGG  650

seq1  ATCCAAATCCTAAAGAGAAATTGTAAATCATATGGCCTTTCTTCAGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAATCCTAAAGAGAAATTGTAAATCATATGGCCTTTCTTCAGAGCT  700

seq1  GTCTGGCCTCTGGATGGGATTGCTGGAACTCAGCAGGGCCTTCTACAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCCTCTGGATGGGATTGCTGGAACTCAGCAGGGCCTTCTACAGTA  750

seq1  TGCCTAGGGGAATGATCTGGGAATGGAGTAAGCACACCTCCCCAAAGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGGGAATGATCTGGGAATGGAGTAAGCACACCTCCCCAAAGTCC  800

seq1  -TGCCTCACCAGATGAGCTTATAGATAATCCAGACTCCAATTGCCAGGCA  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCACCAGATGAGCTTATAGATAATCCAGACTCCAATTGCCAGGCA  850

seq1  CAGCCACACTCATCACACAACATT-GGTTTCTATATACCTTATTAGGAT  897
      |||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  CAGCCACACTCATCACACAACATTGGGTTTCTATATACCTTAGTAGGAT  899