BAC Information

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BAC

Clone NameB6Ng01-194O20
Chromosome7 (Build37)
Map Location 149,857,438 - 149,858,380
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as
Downstream geneIns2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194O20.bB6Ng01-194O20.g
ACCGA017486GA017487
length9491,172
definitionB6Ng01-194O20.b B6Ng01-194O20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccctcataataggcccagagctatttattttattttattttatt
gtattttattttaaacactgattgtttaaggaagggaagaatgcaggcaa
caagtgcccatggaggagtaactaaaccatagtgccactgaggcaagaat
ggggcacaaagtatcagtgagttagagtttgaagggcatagcccttcaaa
attttatttcatgttccatggacacagtctaggggacacaggaggaaggg
accattaaagaaaagaacaaatattgaggtgtaactatgaagacacagca
cagaaaaaacaataaaatgaaactactctcttgaggcttgggtggagagt
catctaattcaggggatctgcctggactctcatttatggaaaacaaagct
gaagtacctctagaaatccacagcacccagtttttcttcctggactgcta
aagtgacctcatgctgaatctgatagatatatctttaattacaatccaca
atctaaagttatcactgcagggatctgggggtactcagggaagggaagtg
gtaagaggcaaagctgtaattctctcccctacagagagaaggccttctat
agcatcatggtataagtgatttctgtagccttgtacttgggactgaggat
ccccctcccttgtcctatcaggcattctttcctttgcatatcggtgggat
gtacaagggtggattaaacactgttcttaatcctcattggcttctccacc
attctgcacctgaaaagggaatttgcaaatccggctcgagcttgacatct
ggtggtcatttaagagattgcactgacttctttcagaaacatgcctcttc
ccaacaatccctaactataaggtgctttaccaagccttgagaatgggaaa
agaagaggaaggaaggtgttagggctggagacgtagttcagtgggtaga
gaattctctttaatagggacggggtttcgttttctctctctcttgcttct
cgctcgctcttgcttcttgcactctggctcctgaagatgtaagcaataaa
gttttgccgcagaagattctggtctgtggtgttcttcctggccgggcgtg
agaacgcgtctaataacaattggtgccgaattccgggacgagaaaaaaac
tcgggactggcgcaaggaagatccctcattccagaaccagaactgcgggt
cgcggtaataaaggttcccgtaaagcagactgttaagaaggattcaactg
tatgaattcagaacttttcagctggggaacgagagtaccagtgagtacag
ctttacgaggtaagtctgatcttgaactttctaaggaaattcaagacagt
ctatcagaagtaaagtggaatatgtttggccttgaattttttctggtgtt
aggagcccttttgttccttttcacatgttatcaagtgattaagatagggc
tgaaaattctagaggaaattcaggacaagctatcagaagtaaagcgggga
gagagagtaggagcaaagagaaaatatggtacacaaaataagtatacagg
cctttccaagggtcttgaacccgaggaaaagttaaggttaggtaggaata
cctggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagat
caattagcggaggtctctaggagatactcgtcactagatgagctcaggaa
gccagctcttagtagttctgaagcagatgaagaattctcctctgaggaaa
cagactgggaggaagaagcagcccattaccagccagctaattggtcaaga
aaaaagccaaaagcggctggcgaaggccagtttgctgatttggcctcagg
cagtcggcttcaaggttcggccctatgcggagtccccgccctgcgtagtg
cgtcagcaatgcgcagagaggcagtgcgcagagaggcagttgcgcagact
cattcattccagagagacaaaggaaatacaacagcattcggtctttgagg
agcgagggtgggcgtgtccacgcttcggtagaatacttaccaatttgaga
actgcgagtcgtccgtacattgaccatgcttatatttacttgtgatgcaa
gatgagaacacgagtctatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149857438_149858380
seq2: B6Ng01-194O20.b_48_996

seq1  GAATTCCCCTCATAATAGGCCCAGAGCTATTTATTTTATTTTATTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTCATAATAGGCCCAGAGCTATTTATTTTATTTTATTTTATT  50

seq1  GTATTTTATTTTAAACACTGATTGTTTAAGGAAGGGAAGAATGCAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTATTTTAAACACTGATTGTTTAAGGAAGGGAAGAATGCAGGCAA  100

seq1  CAAGTGCCCATGGAGGAGTAACTAAACCATAGTGCCACTGAGGCAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCCCATGGAGGAGTAACTAAACCATAGTGCCACTGAGGCAAGAAT  150

seq1  GGGGCACAAAGTATCAGTGAGTTAGAGTTTGAAGGGCATAGCCCTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACAAAGTATCAGTGAGTTAGAGTTTGAAGGGCATAGCCCTTCAAA  200

seq1  ATTTTATTTCATGTTCCATGGACACAGTCTAGGGGACACAGGAGGAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTCATGTTCCATGGACACAGTCTAGGGGACACAGGAGGAAGGG  250

seq1  ACCATTAAAGAAAAGAACAAATATTGAGGTGTAACTATGAAGACACAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAAAGAAAAGAACAAATATTGAGGTGTAACTATGAAGACACAGCA  300

seq1  CAGAAAAAACAATAAAATGAAACTACTCTCTTGAGGCTTGGGTGGAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAACAATAAAATGAAACTACTCTCTTGAGGCTTGGGTGGAGAGT  350

seq1  CATCTAATTCAGGGGATCTGCCTGGACTCTCATTTATGGAAAACAAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAATTCAGGGGATCTGCCTGGACTCTCATTTATGGAAAACAAAGCT  400

seq1  GAAGTACCTCTAGAAATCCACAGCACCCAGTTTTTCTTCCTGGACTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACCTCTAGAAATCCACAGCACCCAGTTTTTCTTCCTGGACTGCTA  450

seq1  AAGTGACCTCATGCTGAATCTGATAGATATATCTTTAATTACAATCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACCTCATGCTGAATCTGATAGATATATCTTTAATTACAATCCACA  500

seq1  ATCTAAAGTTATCACTGCAGGGATCTGGGGGTACTCAGGGAAGGGAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGTTATCACTGCAGGGATCTGGGGGTACTCAGGGAAGGGAAGTG  550

seq1  GTAAGAGGCAAAGCTGTAATTCTCTCCCCTACAGAGAGAAGGCCTTCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGCAAAGCTGTAATTCTCTCCCCTACAGAGAGAAGGCCTTCTAT  600

seq1  AGCATCATGGTATAAGTGATTTCTGTAGCCTTGTACTTGGGACTGAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATGGTATAAGTGATTTCTGTAGCCTTGTACTTGGGACTGAGGAT  650

seq1  CCCCCTCCCTTGTCCTATCAGGCATTCTTTCCTTTGCATATCGGTGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCTTGTCCTATCAGGCATTCTTTCCTTTGCATATCGGTGGGAT  700

seq1  GTACAAGGGTGGATTAAACACTGTTCTTAATCCTCATTGGCTTCTCCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGGGTGGATTAAACACTGTTCTTAATCCTCATTGGCTTCTCCACC  750

seq1  ATTCTGCACCTGAAAAGGGAATTTGCAAATCCGGCTCGAGCTTGACATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCACCTGAAAAGGGAATTTGCAAATCCGGCTCGAGCTTGACATCT  800

seq1  GGTGGTCATTTAAGAGATTGCACTGACT--CTTCAG-AACATGCCTCTTT  847
      ||||||||||||||||||||||||||||   ||||| |||||||||| ||
seq2  GGTGGTCATTTAAGAGATTGCACTGACTTCTTTCAGAAACATGCCTC-TT  849

seq1  CCCAACAAT-CCTAACTATAAGGTGCTTTACCAAGCCTTGAGAATGG--A  894
      ||||||||| |||||||||||||||||||||||||||||||||||||  |
seq2  CCCAACAATCCCTAACTATAAGGTGCTTTACCAAGCCTTGAGAATGGGAA  899

seq1  AAGAAGAGGAAGGAAGGTGTTAGGGCTGGAGACGTAGTTCAGT-GGTAGA  943
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGAAGAGGAAGGAAGGTGTTAGGGCTGGAGACGTAGTTCAGTGGGTAGA  949