BAC Information

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BAC

Clone NameB6Ng01-195E21
Chromosome7 (Build37)
Map Location 67,031,935 - 67,033,031
singlet/doubletsinglet
Overlap geneLOC664788
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneSnrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195E21.bB6Ng01-195E21.g
ACCGA017763GA017764
length1,2361,109
definitionB6Ng01-195E21.b B6Ng01-195E21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccctttatatccctcacagagcgacactggtcagctctatga
taacccttgccacacttagagcaaagagtgagagtccctccctgtttatc
tggagctctgcaatctttcttaaaatgcccaggctttccgcagttaaaac
atgtcctctgatcatttctgctcatggagcggttttgggattgaaggatg
gcagccgctaaacctgcattgctgagaggtcccccaagctctcgacagac
cctgagccagtcttgtaagcctttgttctttcttggggctatggccgctc
ggcactcctttgtggcttgctcatagattagctgttctatcagaggcgca
gcttgctctgactctccaaaaatacgctctgctgcctctgtcattctggc
cacaaaatctgagaaggattcctgaggtccctggattatctttgttaact
gaccagtggtttcacctgctcgagagagcgccttccaggccctaatagcc
gtggaagaaatctgggcataagctccccaatggtagtttgtctgatcagc
agaataagctccctgacccgttaacaagtcaaaagtccaatctctctgct
ctggagtcaaagcagctgcgtttgctcgggcctgcgcttgtgcagtttca
tgccaaagagctctccattccatatatttgcccatactagggagagcggc
ttttacaaccgtttgccagtcggcaggagttagtgccatgccggcgagcc
tgtctaactgcaccaaggtaaaattagcattggttccatatttacggacc
gactcggcaatttctttaatttgtaagtattctaccggagcgtggacacg
cccaccctcggctccttcaaagaccggaaatgcctgttgtattttccttt
gttcctctctgggaatgaatgagtctgcgcactgcctctctgcgcactgc
ctctctgcgcattgctgacgcactacgcagggcggggacctccgcatagg
gcggaccttgaagccgactgccctgagccaatcagcaaactgggccttcg
ccagccgcttttgggcttttttctgaccactaagcctggcctggtaatgg
gctgcttctcctccagtctgtttcctcagaagggagaattcttcactctg
ccttcagaacctactaagagctgcttctgagctcatcctaggtgagcgag
aattatctctctccttagagaagacactcgcgacta
gaattctgaactctcagaggagtttgattttacctcatgcaaagacccag
aagtaatgatcagagaaggactggagccatgattgaaggctcaaaagttg
ttggcttagatatccttggaggcccaattttgctggttgacttattcaga
gctgcctccttcttcttcgtcagcataggcaaggggacctatgattgccc
ttgttattggctttttctgactggatgcttggagaagagccttcattccc
ttgaaaactttgctcaggacactggtggaagaagttgatggcatggacgt
aagagaaagtgttgagtacctgtattgcagctcacatatcatccttaagt
ccttagagtgagctgaggacccagcaagcacttgagagcaaagggcatgg
catgttcacatccaaggcctgagagtaacagcaagtgagatctggaaggg
cagtgcgaagaggttggtaagagcaggagtgttgagggtgcccatgagac
atgacaagcccatagtacatggtaagcccataatccatgtggttttgcat
tgttcccactctaatcggggcatgttctctgtgctgtcttcacagggttg
cattccctttccagtatggtccatggaaaacagcagaggaaatggcccca
cagcattggctgagtgtttatgtcgtgcaactgagtctccatcgaactgt
tgtggtgttgctgacttgccctaggtcacctgagttaaatggtaaggaac
atgggaattgctgcatgaattctagtgcccaggtcttggtggagcaaggg
aatggctgccattgattatgtccagggccttcgggacatgggagcatgcc
taaggtccctggtttctcccatgtttggagcttccggcccattgtttcct
gggcagctggattgttcagtgtccagcaattccattgctctctcctaagg
cagagcactcctagagtactggaacacttgatgcaatgcacttccaagct
gccttggatctatgatgatttccagtcaaacatttcctcgggaaaggctg
aacaaattgagtgaaaactctgtaccgtcactctcatcggaactgaagtt
cagcatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67031935_67033031
seq2: B6Ng01-195E21.g_68_1173 (reverse)

seq1  AAGATGCTGGACCTCAGTTCCGATGAGAGTGGCGGTACAGAGTTTTCACT  50
      ||||||||| || |||||||||||||||||| ||||||||||||||||||
seq2  AAGATGCTGAACTTCAGTTCCGATGAGAGTGACGGTACAGAGTTTTCACT  50

seq1  CATTTTGTTCAGCTTTTCC--AAGGAATGTTTGACTGGGAATCATCATAG  98
      || |||||||||| |||||  | | ||||||||||||| |||||||||||
seq2  CAATTTGTTCAGCCTTTCCCGAGGAAATGTTTGACTGGAAATCATCATAG  100

seq1  ATCCAA-GCTCGTTGG-AGTGCATTGCATCAAGTGGTTCCAGTACTCT-G  145
      |||||| ||   |||| ||||||||||||||||| ||||||||||||| |
seq2  ATCCAAGGCAGCTTGGAAGTGCATTGCATCAAGT-GTTCCAGTACTCTAG  149

seq1  GAGTGCTCTGGCTTTGGGGAGAGCAATGG-ACTGCTGGACACTG-ACAAT  193
      |||||||||| ||| || ||||||||||| | |||||||||||| |||||
seq2  GAGTGCTCTGCCTTAGGAGAGAGCAATGGAATTGCTGGACACTGAACAAT  199

seq1  CCA-CTG-CCAGGGAACAATGGGCC-AAAGCTCCAAACATGGGAGAAACC  240
      ||| ||| ||||| |||||||||||  |||||||||||||||||||||||
seq2  CCAGCTGCCCAGGAAACAATGGGCCGGAAGCTCCAAACATGGGAGAAACC  249

seq1  AGAGGCCCTAGGCATGCT-CCATGTCCCGAAGGGCCTGGACATAATCAAT  289
      || | || |||||||||| |||||||||||||| ||||||||||||||||
seq2  AGGGACCTTAGGCATGCTCCCATGTCCCGAAGGCCCTGGACATAATCAAT  299

seq1  GGCAGCCGTTCCC-TGCTCCACCAAGACCTGGGCACCTAGAATTCATGCA  338
      ||||||| ||||| ||||||||||||||||||||| ||||||||||||||
seq2  GGCAGCCATTCCCTTGCTCCACCAAGACCTGGGCA-CTAGAATTCATGCA  348

seq1  GCAATTCCCATGTTCCTTACCATTTAACTCAGGTGACCTAGGGCAAGTCA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCCCATGTTCCTTACCATTTAACTCAGGTGACCTAGGGCAAGTCA  398

seq1  GCAACACCACAACAGTTCGATGGAGACTCAGTTGGACGACATAAACTCTC  438
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  GCAACACCACAACAGTTCGATGGAGACTCAGTTGCACGACATAAACACTC  448

seq1  AGCCAATGCTGTGGGGCCATTTCCTCTGCATGTTTTCTATGGATCATACT  488
      ||||||||||||||||||||||||||||| ||||||| ||||| ||||||
seq2  AGCCAATGCTGTGGGGCCATTTCCTCTGC-TGTTTTCCATGGACCATACT  497

seq1  GGAAAGGGAATGCAACCCTGTGAAGACAACACAGAGAACATGCCCCGATT  538
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGAAAGGGAATGCAACCCTGTGAAGACAGCACAGAGAACATGCCCCGATT  547

seq1  ACAGTGGGACCAATGCAAAACCACATGGATTATGGGCTTACCATGTACTA  588
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGAACAATGCAAAACCACATGGATTATGGGCTTACCATGTACTA  597

seq1  TGGGCTTGTCATATCTCACAGGCACCCTCAACACTCCTGCTCTTACCAAC  638
      |||||||||||| |||||  ||||||||||||||||||||||||||||||
seq2  TGGGCTTGTCATGTCTCATGGGCACCCTCAACACTCCTGCTCTTACCAAC  647

seq1  CTCTTCACACTGCCCCTCCAGATCTCACTTGCTGTTACTCTCAGGCCTTG  688
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCTTCGCACTGCCCTTCCAGATCTCACTTGCTGTTACTCTCAGGCCTTG  697

seq1  GATGGGAACATGCCATGCCCTTTGCTCTCAAGTGCTTGCTGGGTCCTCAG  738
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAACATGCCATGCCCTTTGCTCTCAAGTGCTTGCTGGGTCCTCAG  747

seq1  CTCACTCTAAGGACTTAAGGATGATATGTGAGCTGCAATACAGGTACTCA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTAAGGACTTAAGGATGATATGTGAGCTGCAATACAGGTACTCA  797

seq1  ACACTTTCTCTTAGGTCCATGCCATCAACTTCTTCCACCAGTGTCCTGTG  838
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  ACACTTTCTCTTACGTCCATGCCATCAACTTCTTCCACCAGTGTCCTGAG  847

seq1  CAAAGTTTTCAAGGGAATGAAGGCTCTTCTCCAAGCATCCAGTCAGAAAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTTCAAGGGAATGAAGGCTCTTCTCCAAGCATCCAGTCAGAAAA  897

seq1  AGCCAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGCTGACAAAGAA  938
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGCCAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGCTGACGAAGAA  947

seq1  GGAGGAGGCAGCTCTGAATAACTCCACCAGCAAAATTGGGCCTCCAAGGA  988
      | ||||||||||||||||||| || |||||||||||||||||||||||||
seq2  GAAGGAGGCAGCTCTGAATAAGTCAACCAGCAAAATTGGGCCTCCAAGGA  997

seq1  TATCTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGTCCTTCTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGTCCTTCTC  1047

seq1  TGATCATTACTTCTGTGTCTTTGCATGAGGTAAAATCAAGCTCCTCTGAG  1088
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  TGATCATTACTTCTGGGTCTTTGCATGAGGTAAAATCAAACTCCTCTGAG  1097

seq1  AGTTCAGAA  1097
      |||||||||
seq2  AGTTCAGAA  1106