BAC Information

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BAC

Clone NameB6Ng01-195N15
Chromosome7 (Build37)
Map Location 7,533,060 - 7,650,096
singlet/doubletdoublet
Overlap geneLOC665470, EG665474, EG628368, LOC100042636
Upstream geneZim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33
Downstream geneLOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195N15.bB6Ng01-195N15.g
ACCGA018155GA018156
length1,068999
definitionB6Ng01-195N15.b B6Ng01-195N15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,649,129 - 7,650,096)(7,533,060 - 7,534,045)
sequence
gaattcccctccagaaacccctatcccattctccctccccctgtttctat
gaaggtgctcaaacacccatacacccactcccactttccctccctggcct
tcccctacactggggcatggaggctacccaggacaaaggatctctcctcc
cattgattttcaacaaggccatcttcggctacatatatggttggagccat
gggaccctctatgtgtactcattagttggtggcttagttcctgggttctc
tgtaatgtcctccactttgatgtctgagctttatgagctattgttctgta
gatgaaacatatagggataggtaccacatgatctcctattctctggattt
tgttcagtttgcttctcagtaactgaactgatctgtttcaagccatatgt
ctcttgagagttgtgagaactatagttttttgcgagtgtaaggataaaca
tttaccatgtagtgaggaataatgctggtttagtaaattgtcaccagcag
attctcctctaagattcatgacctccctagttctgaagagttacctaggt
ttccaccaaagctttgattttcttcagaaagcagaaattgttcctaattc
attttattcagccacgtttgaccaaaattaaaacaaggtagaaatctaaa
aaattatatatatatatatatatatatatatatatatatatatatatata
tatacatgtgtttctagcacattgtttacaaatactacctacgacaaagt
tatgtttcatgaagaacaaaatggataccaagagaaaattgtctaatcaa
tttaaagccaggcatacacaaaaacagtttccctacagaaattgtttggc
aaacatcatttgatcccccggactaaataagtaaggaacagagtttgtgc
cccaagaccagcctaattaaatagtgtgtaccagtacagcccatttctta
gggaataagtaatgaatggcatgtcaaaacagtgatgaagggtttccaca
ctaagggtcctttattgaatattacagcaaccctttcatcacattggaga
gagacattcattcccaca
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaagatg
ttcagcatccttaatcatcagagaaatgaaaatcaaaataaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgaacca
gatgctggtgagcatgtggagaaagaggaacactcctcgaactcagaaat
ctgcctgcctctgcctctcaagtgctgggattaaaggtgtgtgccaacat
gcctggctcccatcattttctttaactgtatattaaccctttgttatatt
tgaaagactattttgagttagagtatggaatgtctgcatactttctttct
ttctttctttctttctttctttctttctttctttctttctttctttcttt
ctttcttcctttctttccttcttgcttgcttgcttgctcccttgctccct
tccttccttcctttccctttccctctttccctctttctttccctctttcc
ctctttctttccctctttcactctttccctctttctttccctctttcccc
tcttcccctctttctttctttctttctttctttctttctttctttctttc
tttctttctttctttctttctttctttctttctttctttctttctttcct
ccctccctccctccctccctccttccttccttccttcctttccttctttc
tttcttttttttttttttcgagacagggtttctctatatagccctggctg
tcctggaactttctttgtagaccaggctggcctcgaactcagaaatctgc
ctgcctctgcctctcaagtgctgggattaaaggtatgtgcccaacattgc
ctggctcccatcatttttttttaactgaatattaaccctttgttaatatt
gaaaatactattttgtgttggagtaatgaaaaatctgcatactttttgta
ctttatgataatttataattaaaggtagtgtctccaatatcacacatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7649129_7650096
seq2: B6Ng01-195N15.b_124_1116 (reverse)

seq1  TGTGGGATTGAATGTC-CTCT-CAGTG-GATG-AAGGTTTGCTGT-ATAA  45
      ||||||| |||||||| |||| || || |||| |||| ||||||| ||| 
seq2  TGTGGGAATGAATGTCTCTCTCCAATGTGATGAAAGGGTTGCTGTAATAT  50

seq1  TCA--TAAGGA-CCTTAGT-TGTGAACCC-TCA-CACTG-TTTGACATGC  88
      |||   ||||| ||||||| ||  ||||| ||| ||||| ||||||||||
seq2  TCAATAAAGGACCCTTAGTGTGGAAACCCTTCATCACTGTTTTGACATGC  100

seq1  CA-TCATTACTTATTCC--TAGAAAT-GGCTGTACTGGTACACACTATTT  134
      || ||||||||||||||   |||||| |||||||||||||||||||||||
seq2  CATTCATTACTTATTCCCTAAGAAATGGGCTGTACTGGTACACACTATTT  150

seq1  AATTAGGCTGGTCTT-GGGCACAAACTCTGTTTCCTTACTTATTTAGTCC  183
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  AATTAGGCTGGTCTTGGGGCACAAACTCTG-TTCCTTACTTATTTAGTCC  199

seq1  -GGGGATC-AATGATGTTTGCC-AACAA-TTCTGTAGGGAAACTGTTTTT  229
       ||||||| ||||||||||||| ||||| |||||||||||||||||||||
seq2  GGGGGATCAAATGATGTTTGCCAAACAATTTCTGTAGGGAAACTGTTTTT  249

seq1  GTGTATGCCTGGCTTT-AATTGATTAGACAATTTTCTCTTGGTATCCA-T  277
      |||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  GTGTATGCCTGGCTTTAAATTGATTAGACAATTTTCTCTTGGTATCCATT  299

seq1  TTGTTCTTCATGAAACATAACTTTGTCGTAGGTAGTATTTGTAAACAATG  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTCATGAAACATAACTTTGTCGTAGGTAGTATTTGTAAACAATG  349

seq1  TGCTAG-AACACATG--TATATATATATATATATATATATATATATATAT  374
      |||||| ||||||||  |||||||||||||||||||||||||||||||||
seq2  TGCTAGAAACACATGTATATATATATATATATATATATATATATATATAT  399

seq1  ATATATATATATATAATTTTTTAGATTTCTACCTTGTTTTAATTTTGGTC  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATAATTTTTTAGATTTCTACCTTGTTTTAATTTTGGTC  449

seq1  AAACGTGGCTGAATAAAATGAATTAGGAACAATTTCTGCTTTCTGAAGAA  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGGCTGAATAAAATGAATTAGGAACAATTTCTGCTTTCTGAAGAA  499

seq1  AATCAAAGCTTTGGTGGAAACCTAGGTAACTCTTCAGAACTAGGGAGGTC  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGCTTTGGTGGAAACCTAGGTAACTCTTCAGAACTAGGGAGGTC  549

seq1  ATGAATCTTAGAGGAGAATCTGCTGGTGACAATTTACTAAACCAGCATTA  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCTTAGAGGAGAATCTGCTGGTGACAATTTACTAAACCAGCATTA  599

seq1  TTCCTCACTACATGGTAAATGTTTATCCTTACACTCGCAAAAAACTATAG  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACTACATGGTAAATGTTTATCCTTACACTCGCAAAAAACTATAG  649

seq1  TTCTCACAACTCTCAAGAGACATATGGCTTGAAACAGATCAGTTCAGTTA  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAACTCTCAAGAGACATATGGCTTGAAACAGATCAGTTCAGTTA  699

seq1  CTGAGAAGCAAACTGAACAAAATCCAGAGAATAGGAGATCATGTGGTACC  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGCAAACTGAACAAAATCCAGAGAATAGGAGATCATGTGGTACC  749

seq1  TATCCCTATATGTTTCATCTACAGAACAATAGCTCATAAAGCTCAGACAT  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTATATGTTTCATCTACAGAACAATAGCTCATAAAGCTCAGACAT  799

seq1  CAAAGTGGAGGACATTACAGAGAACCCAGGAACTAAGCCACCAACTAATG  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGGAGGACATTACAGAGAACCCAGGAACTAAGCCACCAACTAATG  849

seq1  AGTACACATAGAGGGTCCCATGGCTCCAACCATATATGTAGCCGAAGATG  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACATAGAGGGTCCCATGGCTCCAACCATATATGTAGCCGAAGATG  899

seq1  GCCTTGTTGAAAATCAATGGGAGGAGAGATCCTTTGTCCTGGGTAGCCTC  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTTGAAAATCAATGGGAGGAGAGATCCTTTGTCCTGGGTAGCCTC  949

seq1  CATGCCCCAGTGTAGGGGAAGGCCAGGGAGGGAAAGTGGGAGTG  968
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCCAGTGTAGGGGAAGGCCAGGGAGGGAAAGTGGGAGTG  993

seq1: chr7_7533060_7534045
seq2: B6Ng01-195N15.g_68_1066

seq1  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAACACCTGAAAAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAACACCTGAAAAGATG  50

seq1  TTCAGCATCCTTAATCATCAGAGAAATGAAAATCAAAATAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGAGAAATGAAAATCAAAATAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGAACCA  150

seq1  GATGCTGGTGAGCATGTGGAGAAAGAGGAACACTCCTCGAACTCAGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGTGAGCATGTGGAGAAAGAGGAACACTCCTCGAACTCAGAAAT  200

seq1  CTGCCTGCCTCTGCCTCTCAAGTGCTGGGATTAAAGGTGTGTGCCAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCCTCTGCCTCTCAAGTGCTGGGATTAAAGGTGTGTGCCAACAT  250

seq1  GCCTGGCTCCCATCATTTTCTTTAACTGTATATTAACCCTTTGTTATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCTCCCATCATTTTCTTTAACTGTATATTAACCCTTTGTTATATT  300

seq1  TGAAAGACTATTTTGAGTTAGAGTATGGAATGTCTGCATACTTTCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGACTATTTTGAGTTAGAGTATGGAATGTCTGCATACTTTCTTTCT  350

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  400

seq1  CTTTCTTCCTTTCTTTCCTTCTTGCTTGCTTGCTTGCTCCCTTGCTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCTTTCTTTCCTTCTTGCTTGCTTGCTTGCTCCCTTGCTCCCT  450

seq1  TCCTTCCTTCCTTTCCCTTTCCCTCTTTCCCTCTTTCTTTCCCTCTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTTCCCTTTCCCTCTTTCCCTCTTTCTTTCCCTCTTTCC  500

seq1  CTCTTTCTTTCCCTCTTTCACTCTTTCCCTCTTTCTTTCCCTCTTTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTTCCCTCTTTCACTCTTTCCCTCTTTCTTTCCCTCTTTCCCC  550

seq1  TCTTCCCC----TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  596
      ||||||||    ||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  600

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCT  650

seq1  CCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCTTCCTTTCCTTCTTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCTTCCTTTCCTTCTTTC  700

seq1  TTTCTTTTTTTTTTTTTTCGAGACAGGGTTTCTCTATATAGCCCTGGCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTTTTTTCGAGACAGGGTTTCTCTATATAGCCCTGGCTG  750

seq1  TCCTGGAACTTTCTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTTTCTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGC  800

seq1  CTGCCTCTGCCTCTCAAGTGCTGGAATTAAAGGTATGTG-CCAACA-TGC  844
      |||||||||||||||||||||||| |||||||||||||| |||||| |||
seq2  CTGCCTCTGCCTCTCAAGTGCTGGGATTAAAGGTATGTGCCCAACATTGC  850

seq1  CTGGCTCCCATCA-TTTTTTTTAACTGTATATTAACCCTTTGTT-ATATT  892
      ||||||||||||| ||||||||||||| |||||||||||||||| |||||
seq2  CTGGCTCCCATCATTTTTTTTTAACTGAATATTAACCCTTTGTTAATATT  900

seq1  TGAAATACTATTTTGTGTTGGAGT-ATGGAAAATCTGCATAC-TTTTGTA  940
        |||||||||||||||||||||| ||| ||||||||||||| |||||||
seq2  GAAAATACTATTTTGTGTTGGAGTAATGAAAAATCTGCATACTTTTTGTA  950

seq1  CTTTATGATAATTTATA--TTAAGGTAGTGTCTCC-ATATCACACATGG  986
      |||||||||||||||||  | |||||||||||||| |||||||||||||
seq2  CTTTATGATAATTTATAATTAAAGGTAGTGTCTCCAATATCACACATGG  999