BAC Information

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BAC

Clone NameB6Ng01-196C08
Chromosome7 (Build37)
Map Location 90,552,483 - 90,553,442
singlet/doubletsinglet
Overlap genenone
Upstream geneAdamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196C08.g
ACCGA018366
length1,001
definitionB6Ng01-196C08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtcattttgtagtgaccagtcaagtagcaataaaatcaaata
aatccatgtgtcctgggccagacaggcacagcagagtagagctttggcct
ggatttggtgctatgggggtgctcaggggggttctggaaacgtgttggac
tgatcctccctggtttctaagaagcacggatccctcagattcctcctcag
acagcttctgtgtgtgcgaatatatacgcacaaaatctatatgttaataa
acacaagcatcctctctgcaaaactccagacattggtgactaaagtgaaa
ttcttgcctcttctctagccccaatccttgacttcagttttgattaacta
tgtatgatagatgttaatttatttattgtagctcatggtgaattcgcact
tcatttagatttttctacaactatatatgtatctgctgctataggatttt
acaattttgatgtatgtttattttttattttattttatttttggttaggt
attttcctcatttacgtttccaaagctatcccaaaagtcccccataccct
cgcccctactcccctacccacccactcccactttttggccctggcgttcc
cctgtactggggcatataaagtttgcatgtccaatgggtctctctttcca
gtgatggccgactaggccatcttttgagacatatgcagctagagtcaaga
gctctggggtactggttagttcataatgttgttgcacctatagggttgca
gatcccttgagctccttaggtattttctctagctcctccattgggggccc
tgtgatctgcccaatagctgactgtgagcatccacttatgtgtttgctag
gccccagcatagtctcacaagagacagctatatctgggttcctttcagca
caatcttgctagtgtaatgcaatggttgtcaccgtttgggaggatgatta
tggggatggatcccttggatatggcagttctctagaccgatccatccttt
t
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90552483_90553442
seq2: B6Ng01-196C08.g_68_1032

seq1  GAATTCATGTCATTTTGTAGTGACCAGTCAAGTAGCAATAAAATCAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCATTTTGTAGTGACCAGTCAAGTAGCAATAAAATCAAATA  50

seq1  AATCCATGTGTCCTGGGCCAGACAGGCACAGCAGAGTAGAGCTTTGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATGTGTCCTGGGCCAGACAGGCACAGCAGAGTAGAGCTTTGGCCT  100

seq1  GGATTTGGTGCTATGGGGGTGCTCAGGGGGGTTCTGGAAACGTGTTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGTGCTATGGGGGTGCTCAGGGGGGTTCTGGAAACGTGTTGGAC  150

seq1  TGATCCTCCCTGGTTTCTAAGAAGCACGGATCCCTCAGATTCCTCCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTCCCTGGTTTCTAAGAAGCACGGATCCCTCAGATTCCTCCTCAG  200

seq1  ACAGCTTCTGTGTGTGCGAATATATACGCACAAAATCTATATGTTAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCTGTGTGTGCGAATATATACGCACAAAATCTATATGTTAATAA  250

seq1  ACACAAGCATCCTCTCTGCAAAACTCCAGACATTGGTGACTAAAGTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGCATCCTCTCTGCAAAACTCCAGACATTGGTGACTAAAGTGAAA  300

seq1  TTCTTGCCTCTTCTCTAGCCCCAATCCTTGACTTCAGTTTTGATTAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCCTCTTCTCTAGCCCCAATCCTTGACTTCAGTTTTGATTAACTA  350

seq1  TGTATGATAGATGTTAATTTATTTATTGTAGCTCATGGTGAATTCGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATAGATGTTAATTTATTTATTGTAGCTCATGGTGAATTCGCACT  400

seq1  TCATTTAGATTTTTCTACAACTATATATGTATCTGCTGCTATAGGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGATTTTTCTACAACTATATATGTATCTGCTGCTATAGGATTTT  450

seq1  ACAATTTTGATGTATGTTTATTTTTTATTTTATTTTATTTTTGGTTAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTGATGTATGTTTATTTTTTATTTTATTTTATTTTTGGTTAGGT  500

seq1  ATTTTCCTCATTTACGTTTCCAAAGCTATCCCAAAAGTCCCCCATACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTCATTTACGTTTCCAAAGCTATCCCAAAAGTCCCCCATACCCT  550

seq1  CGCCCCTACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGGCGTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCTACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGGCGTTCC  600

seq1  CCTGTACTGGGGCATATAAAGTTTGCATGTCCAATGGGTCTCTCTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGGGGCATATAAAGTTTGCATGTCCAATGGGTCTCTCTTTCCA  650

seq1  GTGATGGCCGACTAGGCCATCTTTTGAGACATATGCAGCTAGAGTCAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCCGACTAGGCCATCTTTTGAGACATATGCAGCTAGAGTCAAGA  700

seq1  GCTCTGGGGTACTGGTTAGTTCATAATGTTGTTGCACCTATAGGGTTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGGTACTGGTTAGTTCATAATGTTGTTGCACCTATAGGGTTGCA  750

seq1  GATCCCTTGAGCTCCTTAGGTATTTTCTCTAGCTCCTCCATTGGGGGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTTGAGCTCCTTAGGTATTTTCTCTAGCTCCTCCATTGGGGGCCC  800

seq1  TGTGATCTGCCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTGCCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCTAG  850

seq1  GCCCCAGCATAGTCTCACAAGAGACAGCTATATCTGGG-TCCTTTCAGCA  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCCCCAGCATAGTCTCACAAGAGACAGCTATATCTGGGTTCCTTTCAGCA  900

seq1  CAATCTTGCTAGTGT-ATGCAATGG-TGTCAACGTTT-GGAGGATGATTA  946
      ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||
seq2  CAATCTTGCTAGTGTAATGCAATGGTTGTCACCGTTTGGGAGGATGATTA  950

seq1  T-GGGATGGATCCCT  960
      | |||||||||||||
seq2  TGGGGATGGATCCCT  965