BAC Information

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BAC

Clone NameB6Ng01-196I14
Chromosome7 (Build37)
Map Location 25,473,631 - 25,474,303
singlet/doubletsinglet
Overlap geneGm1096
Upstream geneEG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101
Downstream geneBC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196I14.b
ACCGA018651
length648
definitionB6Ng01-196I14.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgactaaggcttcaatcagagggctcctggacccactgtctta
tgttccctagaactgtccctctctagaaaacaaggattagcaaggactaa
gtctggtggaattgactcctgcagtttatcagttcccaggtcctgatcag
ctcttcccagcctcagagaagccatgggagcctgccgcatccagtatgtc
ctgctcctctctctactgggcttctgcccctgctcaggtgaggatgcaga
agaagagcaactggcagtcatcatttgaatgtcagagtgcagtacacttc
ccttagtgtctcttcacagagtggaggagaaaacaattgcagtcgtggga
ggagggaactctgtgcaaaggcctgagaaggaccttgtgtctggtgacac
ccagctctcctacccacggttggaggccagcaccctgcccacattttcag
gcaggaaatcgaagatgaatgtcccttgttccatcatcaatattgggtgc
caccatattgtctgtcccctgtgttctcatctcttgccttcctctgagta
gctctgtcagactagaatatgtgccatcctcctttcttttctttctttct
ttctttctttctttctttctttctttctttcttctttctttctttctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25473631_25474303
seq2: B6Ng01-196I14.b_46_659

seq1  GAATTCCTGACTAAGGCTTCAATCAGAGGGCTCCTGGACCCACTGTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACTAAGGCTTCAATCAGAGGGCTCCTGGACCCACTGTCTTA  50

seq1  TGTTCCCTAGAACTGTCCCTCTCTAGAAAACAAGGATTAGCAAGGACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTAGAACTGTCCCTCTCTAGAAAACAAGGATTAGCAAGGACTAA  100

seq1  GTCTGGTGGAATTGACTCCTGCAGTTTATCAGTTCCCAGGTCCTGATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTGGAATTGACTCCTGCAGTTTATCAGTTCCCAGGTCCTGATCAG  150

seq1  CTCTTCCCAGCCTCAGAGAAGCCATGGGAGCCTGCCGCATCCAGTATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCAGCCTCAGAGAAGCCATGGGAGCCTGCCGCATCCAGTATGTC  200

seq1  CTGCTCCTCTCTCTACTGGGCTTCTGCCCCTGCTCAGGTGAGGATGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTCTCTCTACTGGGCTTCTGCCCCTGCTCAGGTGAGGATGCAGA  250

seq1  AGAAGAGCAACTGGCAGTCATCATTTGAATGTCAGAGTGCAGTACACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGCAACTGGCAGTCATCATTTGAATGTCAGAGTGCAGTACACTTC  300

seq1  CCTTAGTGTCTCTTCACAGAGTGGAGGAGAAAACAATTGCAGTCGTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTGTCTCTTCACAGAGTGGAGGAGAAAACAATTGCAGTCGTGGGA  350

seq1  GGAGGGAACTCTGTGCAAAGGCCTGAGAAGGACCTTGTGTCTGGTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAACTCTGTGCAAAGGCCTGAGAAGGACCTTGTGTCTGGTGACAC  400

seq1  CCAGCTCTCCTACCCACGGTTGGAGGCCAGCACCCTGCCCACATTTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTCCTACCCACGGTTGGAGGCCAGCACCCTGCCCACATTTTCAG  450

seq1  GCAGGAAATCGAAGATGAATGTCCCTTGTTCCATCATCAATATTGGGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCAGGAAATCGAAGATGAATGTCCCTTGTTCCATCATCAATATTGGGTG-  499

seq1  CCACCATATTGTCTGTCCCCTGTGTTCCTCATCTCCTTGCCTTCCTCTGA  550
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  CCACCATATTGTCTGTCCCCTGTGTT-CTCATCT-CTTGCCTTCCTCTGA  547

seq1  GTAGCTCTGTCAGACTAGAATATGTGCCATCCTCCTTTTCTTTTTCTTTT  600
      |||||||||||||||||||||||||||||||||||       ||||||||
seq2  GTAGCTCTGTCAGACTAGAATATGTGCCATCCTCC-------TTTCTTTT  590

seq1  CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTC  650
      | |||||||   |||||||   |||||||                     
seq2  C-TTTCTTT--CTTTCTTT--CTTTCTTT---------------------  614

seq1  TTTTCTTTTCTTTTCTTTTCTTT  673
                             
seq2  -----------------------  614