BAC Information

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BAC

Clone NameB6Ng01-197B21
Chromosome7 (Build37)
Map Location 101,789,700 - 101,980,086
singlet/doubletdoublet
Overlap geneEG666816
Upstream geneEG638305, EG545982
Downstream geneLOC100040132, LOC666823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197B21.bB6Ng01-197B21.g
ACCGA019069GA019070
length3961,139
definitionB6Ng01-197B21.b B6Ng01-197B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,979,685 - 101,980,086)(101,789,700 - 101,790,839)
sequence
atttcaagtaatctgcaccttaacttatgtgagactaatagagtgcctac
aagactgttttaatggttttggttggaatagttttgcctgttcagtaaac
acagcaaaaactttccaggagttttacaaccaggaatggcgctgagttta
aagtttgtttgtgtgtgtgtgtattccctctcccattttgttttccacaa
tgttcagtgccaaaatatatacttttattatctttgattaatcaacagtc
actgtaatacattatacagatgtctttatgaaaacattttagacatttca
tctttcagatggtactgattaaagtgagctacaaggtagtaagggtagta
ttatatgaataaatgaatgtaggtcatggtggtagtgatgagagta
gaattctctgtacctgtcaaaaaaaaaaaaaaaaaaaaaaagaaaagaaa
agcctgcacctaataagtgaatctcattgatgttacaccccagttggttc
cacttgacctcaggtcttcctcttcaacaatttaaatattatttaaaatt
tgtaatgacttcaaaggaatgagatgattggcatctggttcttagtattg
ctgccgtacattatctgtcatgattaggcagtcctggtcttccaacatca
cagataaaaactctgatttggtaacccaatatttactatagtgtccttta
attgataggagcatgactctgagctgagggattagagaagttcctgaaag
gaaagagaacaatcagtagtccttgaaaccaccttcttagacactgtatc
caagggtaagagggaaaagaataaatgtgtttatatcaaaggatgaaagg
acatagaataaatgagtttgcttcattttaccaataatgactatgtatgg
ttaagttttctttcatttctgccctttagaatatatcatcaccatcatca
tcatcaccatcatcatttgagcaacaattctcaaatgattaagtaagatt
tgagattaaatttaggaaattctaaacaatgtctcaattaacagtattag
tatttcctcaagtatgtgcattgttctctttatagtacacaagaatcgtt
cttgaggttagagcatgattatacgttgaaagtaaatacaattgctttgg
ggaccaaaaggtctgcctaatcctgattcagttccatataagcaaagagc
tgtctcatcctgaatcagttctgcataagcaggtacagtcaacatgaaag
gcatgggaatgtccaaataagacattatcctgacaatcatattatcagtt
ctcccttctagaaagtgaagatacagtagaagtaatcagcgtcctctttc
aatagattgaattcatcatgatggaggaggcacaaatgcataaaagacag
gtgagctaatacactaaaaacaaaacacacccagaaaaggtagtcatagg
agttcttcttcatgaaacaggtgtattctaccaaggctaaacacagcctt
aaggacccatatactgggggtttccttcatactcagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101979685_101980086
seq2: B6Ng01-197B21.b_44_445 (reverse)

seq1  TACTCTCATCACTACCACCATGACCTACATTCATTTATTCATATAATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCATCACTACCACCATGACCTACATTCATTTATTCATATAATACT  50

seq1  ACCCTTACTACCTTGTAGCTCACTTTAATCAGTACCATCTGAAAGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTACTACCTTGTAGCTCACTTTAATCAGTACCATCTGAAAGATGAA  100

seq1  ATGTCTAAAATGTTTTCATAAAGACATCTGTATAATGTATTACAGTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAAAATGTTTTCATAAAGACATCTGTATAATGTATTACAGTGACT  150

seq1  GTTGATTAATCAAAGATAATAAAAGTATATATTTTGGCACTGAACATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTAATCAAAGATAATAAAAGTATATATTTTGGCACTGAACATTGT  200

seq1  GGAAAACAAAATGGGAGAGGGAATACACACACACACAAACAAACTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAAAATGGGAGAGGGAATACACACACACACAAACAAACTTTAAA  250

seq1  CTCAGCGCCATTCCTGGTTGTAAAACTCCTGGAAAGTTTTTGCTGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCGCCATTCCTGGTTGTAAAACTCCTGGAAAGTTTTTGCTGTGTTT  300

seq1  ACTGAACAGGCAAAACTATTCCAACCAAAACCATTAAAACAGTCTTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACAGGCAAAACTATTCCAACCAAAACCATTAAAACAGTCTTGTAG  350

seq1  GCACTCTATTAGTCTCACATAAGTTAAGGTGCAGATTACTTGAAATGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTATTAGTCTCACATAAGTTAAGGTGCAGATTACTTGAAATGAAT  400

seq1  TC  402
      ||
seq2  TC  402

seq1: chr7_101789700_101790839
seq2: B6Ng01-197B21.g_67_1205

seq1  GAATTCTCTGTACCTGTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTACCTGTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAA  50

seq1  AGCCTGCACCTAATAAGTGAATCTCATTGATGTTACACCCCAGTTGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCACCTAATAAGTGAATCTCATTGATGTTACACCCCAGTTGGTTC  100

seq1  CACTTGACCTCAGGTCTTCCTCTTCAACAATTTAAATATTATTTAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGACCTCAGGTCTTCCTCTTCAACAATTTAAATATTATTTAAAATT  150

seq1  TGTAATGACTTCAAAGGAATGAGATGATTGGCATCTGGTTCTTAGTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGACTTCAAAGGAATGAGATGATTGGCATCTGGTTCTTAGTATTG  200

seq1  CTGCCGTACATTATCTGTCATGATTAGGCAGTCCTGGTCTTCCAACATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTACATTATCTGTCATGATTAGGCAGTCCTGGTCTTCCAACATCA  250

seq1  CAGATAAAAACTCTGATTTGGTAACCCAATATTTACTATAGTGTCCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAAAACTCTGATTTGGTAACCCAATATTTACTATAGTGTCCTTTA  300

seq1  ATTGATAGGAGCATGACTCTGAGCTGAGGGATTAGAGAAGTTCCTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAGGAGCATGACTCTGAGCTGAGGGATTAGAGAAGTTCCTGAAAG  350

seq1  GAAAGAGAACAATCAGTAGTCCTTGAAACCACCTTCTTAGACACTGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAACAATCAGTAGTCCTTGAAACCACCTTCTTAGACACTGTATC  400

seq1  CAAGGGTAAGAGGGAAAAGAATAAATGTGTTTATATCAAAGGATGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTAAGAGGGAAAAGAATAAATGTGTTTATATCAAAGGATGAAAGG  450

seq1  ACATAGAATAAATGAGTTTGCTTCATTTTACCAATAATGACTATGTATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAATAAATGAGTTTGCTTCATTTTACCAATAATGACTATGTATGG  500

seq1  TTAAGTTTTCTTTCATTTCTGCCCTTTAGAATATATCATCACCATCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTTCTTTCATTTCTGCCCTTTAGAATATATCATCACCATCATCA  550

seq1  TCATCACCATCATCATTTGAGCAACAATTCTCAAATGATTAAGTAAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACCATCATCATTTGAGCAACAATTCTCAAATGATTAAGTAAGATT  600

seq1  TGAGATTAAATTTAGGAAATTCTAAACAATGTCTCAATTAACAGTATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTAAATTTAGGAAATTCTAAACAATGTCTCAATTAACAGTATTAG  650

seq1  TATTTCCTCAAGTATGTGCATTGTTCTCTTTATAGTACACAAGAATCGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTCAAGTATGTGCATTGTTCTCTTTATAGTACACAAGAATCGTT  700

seq1  CTTGAGGTTAGAGCATGATTATACGTTGAAAGTAAATACAATTGCTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTTAGAGCATGATTATACGTTGAAAGTAAATACAATTGCTTTGG  750

seq1  GGACCAAAAGGTCTGCCTAATCCTGATTCAGTTCCATATAAGCAAAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAAAGGTCTGCCTAATCCTGATTCAGTTCCATATAAGCAAAGAGC  800

seq1  TGTCTCATCCTGAATCAGTTCTGCATAAGCAGGTACAGTCAACATGAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATCCTGAATCAGTTCTGCATAAGCAGGTACAGTCAACATGAAAG  850

seq1  GCATGGGAATGTCCAAATAAGACATTATCCTGACAATCATATTATCAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGAATGTCCAAATAAGACATTATCCTGACAATCATATTATCAGTT  900

seq1  CT-CCTTCTAGAAAGTGAAGATACAGTAGAAGTAATCAGCGTCCTCTTTT  949
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCCCTTCTAGAAAGTGAAGATACAGTAGAAGTAATCAGCGTCCTC-TTT  949

seq1  CAATAGATTGAATTCATCATGATGAGGAAGGCAACAAATGCATAAAAGAC  999
      ||||||||||||||||||||||||  | |||| |||||||||||||||||
seq2  CAATAGATTGAATTCATCATGATGGAGGAGGC-ACAAATGCATAAAAGAC  998

seq1  AGGTGAAGCTAAATACACT-AAAACAAAACACACCAGAAAAAGGTAGTCA  1048
      ||||| |||| |||||||| |||||||||||||||   ||||||||||||
seq2  AGGTG-AGCT-AATACACTAAAAACAAAACACACCCAGAAAAGGTAGTCA  1046

seq1  TAAGAGTCTCCT-TTCATGAAACAAGTGTATTCTACCAAAGCCAAACACA  1097
      || |||| || | ||||||||||| |||||||||||||| || |||||||
seq2  TAGGAGT-TCTTCTTCATGAAACAGGTGTATTCTACCAAGGCTAAACACA  1095

seq1  G-CTTTAGGACACATATACT-GGTGTTTCCTTCATCACTCAGCCA  1140
      | ||| ||||| |||||||| || ||||||||||| |||||||||
seq2  GCCTTAAGGACCCATATACTGGGGGTTTCCTTCAT-ACTCAGCCA  1139