BAC Information

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BAC

Clone NameB6Ng01-197F21
Chromosome7 (Build37)
Map Location 80,752,644 - 80,888,714
singlet/doubletdoublet
Overlap geneEG665610, LOC244061, A830073O21Rik
Upstream geneLOC100042880, LOC233391, LOC665570, LOC100042029, EG384643, LOC625243, 4930429H19Rik, LOC665588, Rgma, Chd2, 1810026B05Rik
Downstream geneSt8sia2, LOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197F21.bB6Ng01-197F21.g
ACCGA019249GA019250
length1,09086
definitionB6Ng01-197F21.b B6Ng01-197F21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,752,644 - 80,753,735)(80,888,629 - 80,888,714)
sequence
gaattcaggtcttcagacttagcaataatcacttttaccctccgagcctt
atctccagcctccacctcgcttcttatcaaagacatttccttcgatctag
cagtttctatgatttacaagttaaggaataattcataatggtcctactta
tgtgaaagaataaacgcagggtctggttcaatggaaatctgcaggggata
atgtgctgctctgcaagtctctacaattaatctccttactaaaagccttc
cttgaaaacaacaacaaaacaaaacaaaacaaaacaaacaacggaagaaa
aagaagaagaaaagaaaagaaaagtaggaaagaaaagaaaaggaaaagga
aaaaaacgtgtcctctctgaaataaagccattcccacattccgaatctcc
atttccaacgacagaagatcttttgcactcctcagatggtttgcttgtta
taaatgatttctcttccaaactgccattaggtgtaccctaataaacagca
ccatacatcctcggaagcacctggggctctcaccacaaatggggggatgt
tccagtcctatcacggccctaacaaaccaattgtcaatcccagaatcgac
catttcttcccatgcttctcagccattttaaacctaattttcacatctac
tttaaatccctacaaatcttcccccttgtccctactgtaaagtctttaca
atgtcaatgtttacttagtaatttgtaaagggtaccgtgttcctttcaga
atatggaaccgtgtgatcttgatactaagaaaatgttttgcaatggttta
gtgtgcagcttgttaagtttcaatttggctattaaagaaaggaccacact
aactttctagaagcacagggagataagtcctttagattaacaaaacaaaa
caaaacaaaaaaaccaaaactgtgtggtgcagaagaggtgccaccaccac
cttgaggggaaagatttaaatgtctaagactgtgtctgaaataaaaaata
caccaccacttgcagctggtggggccatgtcctatgccttcatgtttcat
accacagctaagaacaggaagccttggggggggggggata
tctgaatatcccaacatgcatatatttcatcttcctcttccttcattaac
atcagaaaaagaatatcacggtggggggggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_80752644_80753735
seq2: B6Ng01-197F21.b_45_1134

seq1  GAATTCAGGTCTTCAGACTTAGCAATAATCACTTTTACCCTCCGAGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTTCAGACTTAGCAATAATCACTTTTACCCTCCGAGCCTT  50

seq1  ATCTCCAGCCTCCACCTCGCTTCTTATCAAAGACATTTCCTTCGATCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAGCCTCCACCTCGCTTCTTATCAAAGACATTTCCTTCGATCTAG  100

seq1  CAGTTTCTATGATTTACAAGTTAAGGAATAATTCATAATGGTCCTACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTATGATTTACAAGTTAAGGAATAATTCATAATGGTCCTACTTA  150

seq1  TGTGAAAGAATAAACGCAGGGTCTGGTTCAATGGAAATCTGCAGGGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGAATAAACGCAGGGTCTGGTTCAATGGAAATCTGCAGGGGATA  200

seq1  ATGTGCTGCTCTGCAAGTCTCTACAATTAATCTCCTTACTAAAAGCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTGCTCTGCAAGTCTCTACAATTAATCTCCTTACTAAAAGCCTTC  250

seq1  CTTGAAAACAACAACAAAACAAAACAAAACAAAACAAACAACGGAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAACAACAACAAAACAAAACAAAACAAAACAAACAACGGAAGAAA  300

seq1  AAGAAGAAGAAAAGAAAAGAAAAGTAGGAAAGAAAAGAAAAGGAAAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAAAGAAAAGAAAAGTAGGAAAGAAAAGAAAAGGAAAAGGA  350

seq1  AAAAAACGTGTCCTCTCTGAAATAAAGCCATTCCCACATTCCGAATCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACGTGTCCTCTCTGAAATAAAGCCATTCCCACATTCCGAATCTCC  400

seq1  ATTTCCAACGACAGAAGATCTTTTGCACTCCTCAGATGGTTTGCTTGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAACGACAGAAGATCTTTTGCACTCCTCAGATGGTTTGCTTGTTA  450

seq1  TAAATGATTTCTCTTCCAAACTGCCATTAGGTGTACCCTAATAAACAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATTTCTCTTCCAAACTGCCATTAGGTGTACCCTAATAAACAGCA  500

seq1  CCATACATCCTCGGAAGCACCTGGGGCTCTCACCACAAATGGGGGGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACATCCTCGGAAGCACCTGGGGCTCTCACCACAAATGGGGGGATGT  550

seq1  TCCAGTCCTATCACGGCCCTAACAAACCAATTGTCAATCCCAGAATCGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCCTATCACGGCCCTAACAAACCAATTGTCAATCCCAGAATCGAC  600

seq1  CATTTCTTCCCATGCTTCTCAGCCATTTTAAACCTAATTTTCACATCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCCCATGCTTCTCAGCCATTTTAAACCTAATTTTCACATCTAC  650

seq1  TTTAAATCCCTACAAATCTTCCCCCTTGTCCCTACTGTAAAGTCTTTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCCCTACAAATCTTCCCCCTTGTCCCTACTGTAAAGTCTTTACA  700

seq1  ATGTCAATGTTTACTTAGTAATTTGTAAAGGGTACCGTGTTCCTTTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAATGTTTACTTAGTAATTTGTAAAGGGTACCGTGTTCCTTTCAGA  750

seq1  ATATGGAACCGTGTGATCTTGATACTAAGAAAATGTTTTGCAATGGTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAACCGTGTGATCTTGATACTAAGAAAATGTTTTGCAATGGTTTA  800

seq1  GTGTGCAGCTTGTTAAGTTTCAATTTGGCTATTAAAGAAAGGACCACACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGCTTGTTAAGTTTCAATTTGGCTATTAAAGAAAGGACCACACT  850

seq1  AACTTTCTAGAAGCACAGGGAGATAAGTCCTTTAGATTAACAAAACAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTAGAAGCACAGGGAGATAAGTCCTTTAGATTAACAAAACAAAA  900

seq1  CAAAAC-AAAAAACCAAAACTGTGTGGTGCAGAAGAGGTGCCACCACCAC  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAAAAACCAAAACTGTGTGGTGCAGAAGAGGTGCCACCACCAC  950

seq1  CTTGAGGGGAAAGATTT-AATGTCTAAGAACTGTGTCTTGGAAAT-AAAA  997
      ||||||||||||||||| |||||||||| |||||||||  ||||| ||||
seq2  CTTGAGGGGAAAGATTTAAATGTCTAAG-ACTGTGTCT--GAAATAAAAA  997

seq1  ATACAC--ACACTTGCAGCTGGTGGGGCCATGTCCTTAATTGCCTTCATG  1045
      ||||||   |||||||||||||||||||||||||||    ||||||||||
seq2  ATACACCACCACTTGCAGCTGGTGGGGCCATGTCCT---ATGCCTTCATG  1044

seq1  TTTCATTACCACAGCTAAAGAACA-GAAGCCTTGGGGGGGGGGGGGTA  1092
      ||||| |||||||||| ||||||| |||||||||||||||||||| ||
seq2  TTTCA-TACCACAGCT-AAGAACAGGAAGCCTTGGGGGGGGGGGGATA  1090

seq1: chr7_80888629_80888714
seq2: B6Ng01-197F21.g_69_154 (reverse)

seq1  CCCACCCCCCCCCCACCGTGATATTCTTTTTCTGATGTTAATGAAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCCCCCCACCGTGATATTCTTTTTCTGATGTTAATGAAGGAAG  50

seq1  AGGAAGATGAAATATATGCATGTTGGGATATTCAGA  86
      ||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATGAAATATATGCATGTTGGGATATTCAGA  86