BAC Information

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BAC

Clone NameB6Ng01-197H05
Chromosome7 (Build37)
Map Location 71,896,572 - 71,997,472
singlet/doubletdoublet
Overlap geneApba2, 5730507A09Rik
Upstream geneOtud7a, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee
Downstream geneNdnl2, Tjp1, Gm1693, EG665234, Tarsl2, Tm2d3, LOC665241
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197H05.bB6Ng01-197H05.g
ACCGA019311GA019312
length955418
definitionB6Ng01-197H05.b B6Ng01-197H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,996,926 - 71,997,472)(71,896,572 - 71,896,995)
sequence
gaattcagtagcattcaagaggtaactcaccaactcaaaatcagaagctg
tggtgatcaatattgtcacctttacaaggtttagaatctcctttgagaca
aatttagaacatagccatgagtggagtttctggttgagaagagagaacca
ctcctttaatgtgagtggagccatcctatggtctggggatccagactgca
ttaagaagagactgagctgagcattagagttcacctgtctctgctttctg
gttgctaagttatcagcagtctctggcttctgccaccatgcttccccccc
ccccccaaggtattgtaacctcaaactgtgggccaaactaagccttcctc
ttttaagttgtttcttgtcatgtattttgttacaacaataaggaaaagtg
gtggaaacaagaagtgtataatggatgatcaaccaacatgcagctagtgt
ctaccctcccagtgcccttggatgcatgaactcagatacacatgggcagg
gagacccatttatctacttctgggcttctgattctgtcccaattttgttt
ctggccattcattactttcttttttatcttcttgttttttgagataggat
gtcattttgtcgccctgacttgactgaaactcattaagtagtccaggctt
gcctcaaaaccacagagacccacctggtgccaccctacaagagctgaggt
taaaggtacatctcatgtccagcaaattatcttctcaagttttataattg
gttggaaatccctgccctcatacctgtcacaagcatttagcctacttctt
aaaatcattcttggctgttcttaaatgtttactttccaagatgacctttg
acattttcagggagccaggaaatcaaaataaatgatatgatattttaatt
ggaaatcatataatgtttatacatagcttcagaattgatcttagacagtt
ttttg
tgctgtggtccctgcagggctgccagactccctctagtggccactgggtg
ctcatgcagggcagatggtccagactcccatttcctttgggcatggaagg
atgggagttgttatttcctcaggggatcctggtttatgtcccttaaatca
cctctcttggggccacaatgaccaagtcagcatcttttgacatacctaaa
ggggcttgggggaagaggtacattctttggactggctgcaagtgatggct
aactctcaaggaggggacaggagggggccattggctgcttctaactaatg
gcttccaagaaaggacaatccaattttcctaagtagacattcagaaatga
ctgccctcatgggagtaaccagtctcacacctaaagaaatcaatcctggc
cgggggagggtgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_71996926_71997472
seq2: B6Ng01-197H05.b_43_589 (reverse)

seq1  CAAAATTGGGACAGAATCAGAAGCCCAGAAGTAGATAAATGGGTCTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGGGACAGAATCAGAAGCCCAGAAGTAGATAAATGGGTCTCCCT  50

seq1  GCCCATGTGTATCTGAGTTCATGCATCCAAGGGCACTGGGAGGGTAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGTGTATCTGAGTTCATGCATCCAAGGGCACTGGGAGGGTAGACA  100

seq1  CTAGCTGCATGTTGGTTGATCATCCATTATACACTTCTTGTTTCCACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGCATGTTGGTTGATCATCCATTATACACTTCTTGTTTCCACCAC  150

seq1  TTTTCCTTATTGTTGTAACAAAATACATGACAAGAAACAACTTAAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTATTGTTGTAACAAAATACATGACAAGAAACAACTTAAAAGAG  200

seq1  GAAGGCTTAGTTTGGCCCACAGTTTGAGGTTACAATACCTTGGGGGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTAGTTTGGCCCACAGTTTGAGGTTACAATACCTTGGGGGGGGG  250

seq1  GGGGAAGCATGGTGGCAGAAGCCAGAGACTGCTGATAACTTAGCAACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGCATGGTGGCAGAAGCCAGAGACTGCTGATAACTTAGCAACCAG  300

seq1  AAAGCAGAGACAGGTGAACTCTAATGCTCAGCTCAGTCTCTTCTTAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGACAGGTGAACTCTAATGCTCAGCTCAGTCTCTTCTTAATGC  350

seq1  AGTCTGGATCCCCAGACCATAGGATGGCTCCACTCACATTAAAGGAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGATCCCCAGACCATAGGATGGCTCCACTCACATTAAAGGAGTGG  400

seq1  TTCTCTCTTCTCAACCAGAAACTCCACTCATGGCTATGTTCTAAATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTCTCAACCAGAAACTCCACTCATGGCTATGTTCTAAATTTGT  450

seq1  CTCAAAGGAGATTCTAAACCTTGTAAAGGTGACAATATTGATCACCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGGAGATTCTAAACCTTGTAAAGGTGACAATATTGATCACCACAG  500

seq1  CTTCTGATTTTGAGTTGGTGAGTTACCTCTTGAATGCTACTGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATTTTGAGTTGGTGAGTTACCTCTTGAATGCTACTGAATTC  547

seq1: chr7_71896572_71896995
seq2: B6Ng01-197H05.g_68_491

seq1  GAATTCTGCTGTGGTCCCTGCAGGGCTGCCAGACTCCCTCTAGTGGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGTGGTCCCTGCAGGGCTGCCAGACTCCCTCTAGTGGCCAC  50

seq1  TGGGTGCTCATGCAGGGCAGATGGTCCAGACTCCCATTTCCTTTGGGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTCATGCAGGGCAGATGGTCCAGACTCCCATTTCCTTTGGGCAT  100

seq1  GGAAGGATGGGAGTTGTTATTTCCTCAGGGGATCCTGGTTTATGTCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGATGGGAGTTGTTATTTCCTCAGGGGATCCTGGTTTATGTCCCTT  150

seq1  AAATCACCTCTCTTGGGGCCACAATGACCAAGTCAGCATCTTTTGACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACCTCTCTTGGGGCCACAATGACCAAGTCAGCATCTTTTGACATA  200

seq1  CCTAAAGGGGCTTGGGGGAAGAGGTACATTCTTTGGACTGGCTGCAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGGGGCTTGGGGGAAGAGGTACATTCTTTGGACTGGCTGCAAGTG  250

seq1  ATGGCTAACTCTCAAGGAGGGGACAGGAGGGGGCCATTGGCTGCTTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAACTCTCAAGGAGGGGACAGGAGGGGGCCATTGGCTGCTTCTAA  300

seq1  CTAATGGCTTCCAAGAAAGGACAATCCAATTTTCCTAAGTAGACATTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGCTTCCAAGAAAGGACAATCCAATTTTCCTAAGTAGACATTCAG  350

seq1  AAATGACTGCCCTCATGGGAGTAACCAGTCTCACACCTAAAGAAATCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTGCCCTCATGGGAGTAACCAGTCTCACACCTAAAGAAATCAAT  400

seq1  CCTGGCCGGGGGAGGGTGGGGGTG  424
      ||||||||||||||||||||||||
seq2  CCTGGCCGGGGGAGGGTGGGGGTG  424