BAC Information

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BAC

Clone NameB6Ng01-197I02
Chromosome7 (Build37)5 (Build37)
Map Location 94,668,652 - 94,668,82765,960,350 - 65,961,343
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneGrm5, Ctsc, LOC100039756, Rab38
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197I02.bB6Ng01-197I02.g
ACCGA019349GA019350
length755997
definitionB6Ng01-197I02.b B6Ng01-197I02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,668,652 - 94,668,827)(65,960,350 - 65,961,343)
sequence
gaattccagatatacagacgcagaaactctctgcagctggtaaaaccgtt
cctcttgtcattagtcagctgctgtaaatcagcctcatgtccccacacct
gggattaaaacatagtcttataatatttctgtggttttttgttttttttt
ttaaagcaaacttcccgtgccgggtgtggtggcgcacgcctttaatccca
gcacttgggaggcagagacaggcggatttctgagttcgaggctagcctgg
tctacaaagtgagttccaggacagccagccagggctatacagaggaaccc
tgtctcgaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccaaa
aaaaaaaaaagcaaacttccaaagttctcatacaaggcacttttgtgtat
gtttgaggaggccagttattgggtacagtcttgggtattgtcctcaaaaa
tgctgtcctttgaaaaacaaggtttctggttggcctagagttcacctgtt
aagttgggctggctttccagtgagcctccagaattctctgctgaaatcac
agttgcctgcaaccacatgaagtacatgtgctgggaattggagctcacac
ttaggaggcaaacaccagtcacttagctgttttcccagctccctccctga
tcaaattaagaatatttgaaataaaccaagtgggggtggttcacaccttt
aaatccccagcatctagagaaggcagaggcagaggcaggtggatctctaa
ggatc
gaattcagattttgagacctctacaatctaacagtgtttaaataatacct
ttggattctcaaactgcgcctgattttttttttttttttaagaatttaaa
aaggaaaaactttgtgacagataataaagatgccactccaaagaaaagtc
agaaaaattataagaatcttagaggaaaagaagggcctgtgtaggttacc
ccacgtgtgtgctggggtcacttccgtgtgtggaggatagtctgtggttt
ttttttttttttttttttaattttttttttttttttaaagatttatttat
ttattatatgtaagtacactgtagctgtcttcagacactccaaaaaaggg
catcaaatctcgttacgggtggttatgagccaccatgtggttgctgggat
ttgaactctggaccttcggaagagcagtcgggtgctcttacccactgagc
catctcaccagccctagtctgtggttttaattgctcttttagtaagtacg
tttttactactgaggaataaaaatgatgagtccacaaactatttaaacaa
aatacctgtatttggagttattcgtaatttttttgtttgtttttgttttt
tcgagacagggtttctctatagcgctggctgtctatccttgaactcactc
tgtagaccaggctggcctcgaactcagaagtccgctcgcctcagcctctc
aagtgctggaattaaaggcatgcgccaccactgcctggctaattgctttt
ctttacacttcagtattgccatatgagttaaaacatcttgttcaactcct
gtatcatttgatagcagggactttaaccaaaaaagaattgtatggcagaa
aagaattgtaatcagaaagctgttgaagatgagtataataagtgccattc
ctgtaatcccagcacttagaaagtaaaggcaggggagtttagttttaaag
cacccttgggcttagagagtgagactttggatgtgtaagggaaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94668652_94668827
seq2: B6Ng01-197I02.b_221_402

seq1  TGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGAGGA  50
      ||||||||||||||||||||||||||||| ||||||||||| |||| |||
seq2  TGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGCGGA  50

seq1  TTTCTGGGTTCGAGGCCAGTCTGGTCTACAAAGTGAGTTCCAGGA----C  96
      |||||| ||||||||| || |||||||||||||||||||||||||    |
seq2  TTTCTGAGTTCGAGGCTAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCC  100

seq1  AGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAA  146
      ||||||||||| |||||| |||||||||||||||||||||||||||||||
seq2  AGCCAGGGCTATACAGAGGAACCCTGTCTCGAAAAACCAAAAAAAAAAAA  150

seq1  AAAAAAAAAAAAAAAAAA--GAAAAAAAAAAA  176
      ||||||||||||||||||   |||||||||||
seq2  AAAAAAAAAAAAAAAAAAACCAAAAAAAAAAA  182

seq1: chr5_65960350_65961343
seq2: B6Ng01-197I02.g_66_1062

seq1  GAATTCAGATTTTGAGACCTCTACAATCTAACAGTGTTTAAATAATACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTTTGAGACCTCTACAATCTAACAGTGTTTAAATAATACCT  50

seq1  TTGGATTCTCAAACTGCGCCTGATTTTTTTTTTTTTTTTAAGAATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCTCAAACTGCGCCTGATTTTTTTTTTTTTTTTAAGAATTTAAA  100

seq1  AAGGAAAAACTTTGTGACAGATAATAAAGATGCCACTCCAAAGAAAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAACTTTGTGACAGATAATAAAGATGCCACTCCAAAGAAAAGTC  150

seq1  AGAAAAATTATAAGAATCTTAGAGGAAAAGAAGGGCCTGTGTAGGTTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTATAAGAATCTTAGAGGAAAAGAAGGGCCTGTGTAGGTTACC  200

seq1  CCACGTGTGTGCTGGGGTCACTTCCGTGTGTGGAGGATAGTCTGTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGTGTGCTGGGGTCACTTCCGTGTGTGGAGGATAGTCTGTGGTTT  250

seq1  TTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTAAAGATTTATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTAAAGATTTATTTAT  300

seq1  TTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGG  350
      |||||||||||||||||||||||||||||||||||||||||| || ||||
seq2  TTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAAAAAAGGG  350

seq1  CATCAGATCTCGTTACGGGTGGTTATGAGCCACCATGTGGTTGCTGGGAT  400
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATCTCGTTACGGGTGGTTATGAGCCACCATGTGGTTGCTGGGAT  400

seq1  TTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGC  450

seq1  CATCTCACCAGCCCTAGTCTGTGGTTTTAATTGCTCTTTTAGTAAGTACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCACCAGCCCTAGTCTGTGGTTTTAATTGCTCTTTTAGTAAGTACG  500

seq1  TTTTTACTACTGAGGAATAAAAATGATGAGTCCACAAACTATTTAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTACTGAGGAATAAAAATGATGAGTCCACAAACTATTTAAACAA  550

seq1  AATACCTGTATTTGGAGTTATTCGTAATTTTTTTGTTTGTTTTTGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTGTATTTGGAGTTATTCGTAATTTTTTTGTTTGTTTTTGTTTTT  600

seq1  TCGAGACAGGGTTTCTCTATAGCGCTGGCTGTCTATCCTTGAACTCACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGACAGGGTTTCTCTATAGCGCTGGCTGTCTATCCTTGAACTCACTC  650

seq1  TGTAGACCAGGCTGGCCTCGAACTCAGAAGTCCGCTCGCCTCAGCCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCTCGAACTCAGAAGTCCGCTCGCCTCAGCCTCTC  700

seq1  AAGTGCTGGAATTAAAGGCATGCGCCACCACTGCCTGGCTAATTGCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGGAATTAAAGGCATGCGCCACCACTGCCTGGCTAATTGCTTTT  750

seq1  CTTTACACTTCAGTATTGCCATATGAGTT-AAACATCTTGTTCAACTCCT  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTTACACTTCAGTATTGCCATATGAGTTAAAACATCTTGTTCAACTCCT  800

seq1  GTATCATTTGATAGCAGGGAC-TTAACCAAAAAAGAATTGTATGGCAG-A  847
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  GTATCATTTGATAGCAGGGACTTTAACCAAAAAAGAATTGTATGGCAGAA  850

seq1  AAGAATTGTAATCAGAAAGCTGTTGAAGGATGAGTATAAT-AGTG-CATT  895
      ||||||||||||||||||||||||||| |||||||||||| |||| ||||
seq2  AAGAATTGTAATCAGAAAGCTGTTGAA-GATGAGTATAATAAGTGCCATT  899

seq1  CCTGTAATCCCAGCACTTAGAAAGTTAAGGCAGGGGAGTTAAGTTTTTAA  945
      ||||||||||||||||||||||||| |||||||||||||| || ||||||
seq2  CCTGTAATCCCAGCACTTAGAAAGTAAAGGCAGGGGAGTTTAG-TTTTAA  948

seq1  AGCCACCCTGGGC-TAGAGAGTGAGACTTTGGGATGTGTAAGGGAGGGGA  994
      |||  || ||||| |||||||||||||||| |||||||||||||| ||||
seq2  AGCACCCTTGGGCTTAGAGAGTGAGACTTT-GGATGTGTAAGGGAAGGGA  997