BAC Information

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BAC

Clone NameB6Ng01-197J19
Chromosome7 (Build37)
Map Location 137,917,488 - 138,041,061
singlet/doubletdoublet
Overlap geneBtbd16, EG434249, Plekha1
Upstream geneLOC100043150, Fgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876
Downstream geneHtra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197J19.bB6Ng01-197J19.g
ACCGA019429GA019430
length5581,179
definitionB6Ng01-197J19.b B6Ng01-197J19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,040,498 - 138,041,061)(137,917,488 - 137,918,668)
sequence
agacaagacactctgtttcagcttggatgaaaaggaaagggtcagtgtgc
agtcctgaggcctgcacggagcagaagcgctgactcgttacctgcgtcgg
cgtgatgatgggcacaccaccaacaatgtcagttctgtaagacacttgct
tcttaccacagtcaccttggcgactcaggctgtcggaggccggctgtgag
tctgactgctttggtacctggaagagtgagagagattcctgtgcaacaag
aactgcatctgcaaccctcccatcgcacaggacttgcacctagttttaga
taactgacatataataatctatttatttacagtattttagcccaagcact
cggactgtcctggtcattacttatacgcttcctccttcctccctggccaa
ctctcagcagcttaagaaggagcaggggcttacagggagcaggcaacaca
ggttgagatccctgctgaactacattctagacaactttataaaataaaac
actctcaacatcaattacatactgagtatgggggttttttgtttgtttgg
ttggttgg
gaattcaaattacttttgttgcgaaaatattttggcagccaggcatggtt
atgctagtgacaaactgttttctgatagccctgtcacccctcagcagaaa
gcctgaagcctcaagctgagataacaccagaacccggaacaggaagtcct
tagaatctgactgctgttgccatggtacccacaactacccccaggaagcc
aaaggcaggctcccccagcaaagcatcgccgtaggagaaggggtgagccc
caggtgtcatgagagcgttcaagattcaggctcagaaggtgcccagcctc
caactctcccttggttccgagaccagtgcaaccagcacccctctgcttca
ctctcaacctctgtgaccgtccccgtgggcagcaggactgcagaactgta
agtgggactggtacctcatccacagccgagaccaaggggtcacccagtga
tgggagctgtttgcacatagctccaccagggcaaggaggcatttcagagg
ttcctggctgggagctgaaggagggtcacagacagcttcctcaccagagg
accaagggagcaacaactaaagcccacagagggcacagctcccagtgaga
caaaaataaaaatacatttcagtgctactaagatactcctggggttcaag
gtcagccaggaagactcttgtgtaaaagaaacaggagctagagccaggca
tggtggcgtaggcctttaatcccagcactcgggaggcagaggcaggtgga
tttctgagttcgaggccagccctggtctacaaagtgagttcttctctaca
tagagaaaccctgtctcagaaaaaaaggaagaaggaaagaaagaaagaag
gaaagaaagaaagaaagaaggaaagaaaggaaagaaagaagaaaggaaag
aagaaagaagaaggaaagaaaggatggatggaaggtaagcatgaaagtat
gaaggtatgatgtaagtaatgatgacgaagtaagcaagtaggaatgaaga
atgagaagatgaaagtaagagaaggcgagctaggcagctaccctctgaac
tgaatgaccttttttttctattggagggcccttgccaagaaacaattttc
tttcattattcctgaccagcttctggtatgtgaagtctggccttgaccat
ctcttctcttccttagaagcctctctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_138040498_138041061
seq2: B6Ng01-197J19.b_49_612 (reverse)

seq1  CCAACCAACCAAACAAACAAAAAACCCCCATACTCAGTATGTAATTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAACCAAACAAACAAAAAACCCCCATACTCAGTATGTAATTGATG  50

seq1  TTGAGAGTGTTTTATTTTATAAAGTTGTCTAGAATGTAGTTCAGCAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGTGTTTTATTTTATAAAGTTGTCTAGAATGTAGTTCAGCAGGGA  100

seq1  TCTCAACCTGTGTTGCCTGCTCCCTGTAAGCCCCTGCTCCTTCTTAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACCTGTGTTGCCTGCTCCCTGTAAGCCCCTGCTCCTTCTTAAGCT  150

seq1  GCTGAGAGTTGGCCAGGGAGGAAGGAGGAAGCGTATAAGTAATGACCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGTTGGCCAGGGAGGAAGGAGGAAGCGTATAAGTAATGACCAGG  200

seq1  ACAGTCCGAGTGCTTGGGCTAAAATACTGTAAATAAATAGATTATTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCGAGTGCTTGGGCTAAAATACTGTAAATAAATAGATTATTATAT  250

seq1  GTCAGTTATCTAAAACTAGGTGCAAGTCCTGTGCGATGGGAGGGTTGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTATCTAAAACTAGGTGCAAGTCCTGTGCGATGGGAGGGTTGCAG  300

seq1  ATGCAGTTCTTGTTGCACAGGAATCTCTCTCACTCTTCCAGGTACCAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTCTTGTTGCACAGGAATCTCTCTCACTCTTCCAGGTACCAAAG  350

seq1  CAGTCAGACTCACAGCCGGCCTCCGACAGCCTGAGTCGCCAAGGTGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGACTCACAGCCGGCCTCCGACAGCCTGAGTCGCCAAGGTGACTG  400

seq1  TGGTAAGAAGCAAGTGTCTTACAGAACTGACATTGTTGGTGGTGTGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGAAGCAAGTGTCTTACAGAACTGACATTGTTGGTGGTGTGCCCA  450

seq1  TCATCACGCCGACGCAGGTAACGAGTCAGCGCTTCTGCTCCGTGCAGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACGCCGACGCAGGTAACGAGTCAGCGCTTCTGCTCCGTGCAGGCC  500

seq1  TCAGGACTGCACACTGACCCTTTCCTTTTCATCCAAGCTGAAACAGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACTGCACACTGACCCTTTCCTTTTCATCCAAGCTGAAACAGAGTG  550

seq1  TCTTGTCTGAATTC  564
      ||||||||||||||
seq2  TCTTGTCTGAATTC  564

seq1: chr7_137917488_137918668
seq2: B6Ng01-197J19.g_70_1248

seq1  GAATTCAAATTACTTTTGTTGCGAAAATATTTTGGCAGCCAGGCATGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTACTTTTGTTGCGAAAATATTTTGGCAGCCAGGCATGGTT  50

seq1  ATGCTAGTGACAAACTGTTTTCTGATAGCCCTGTCACCCCTCAGCAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGTGACAAACTGTTTTCTGATAGCCCTGTCACCCCTCAGCAGAAA  100

seq1  GCCTGAAGCCTCAAGCTGAGATAACACCAGAACCCGGAACAGGAAGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGCCTCAAGCTGAGATAACACCAGAACCCGGAACAGGAAGTCCT  150

seq1  TAGAATCTGACTGCTGTTGCCATGGTACCCACAACTACCCCCAGGAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCTGACTGCTGTTGCCATGGTACCCACAACTACCCCCAGGAAGCC  200

seq1  AAAGGCAGGCTCCCCCAGCAAAGCATCGCCGTAGGAGAAGGGGTGAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGCTCCCCCAGCAAAGCATCGCCGTAGGAGAAGGGGTGAGCCC  250

seq1  CAGGTGTCATGAGAGCGTTCAAGATTCAGGCTCAGAAGGTGCCCAGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCATGAGAGCGTTCAAGATTCAGGCTCAGAAGGTGCCCAGCCTC  300

seq1  CAACTCTCCCTTGGTTCCGAGACCAGTGCAACCAGCACCCCTCTGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCCCTTGGTTCCGAGACCAGTGCAACCAGCACCCCTCTGCTTCA  350

seq1  CTCTCAACCTCTGTGACCGTCCCCGTGGGCAGCAGGACTGCAGAACTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAACCTCTGTGACCGTCCCCGTGGGCAGCAGGACTGCAGAACTGTA  400

seq1  AGTGGGACTGGTACCTCATCCACAGCCGAGACCAAGGGGTCACCCAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACTGGTACCTCATCCACAGCCGAGACCAAGGGGTCACCCAGTGA  450

seq1  TGGGAGCTGTTTGCACATAGCTCCACCAGGGCAAGGAGGCATTTCAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTGTTTGCACATAGCTCCACCAGGGCAAGGAGGCATTTCAGAGG  500

seq1  TTCCTGGCTGGGAGCTGAAGGAGGGTCACAGACAGCTTCCTCACCAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCTGGGAGCTGAAGGAGGGTCACAGACAGCTTCCTCACCAGAGG  550

seq1  ACCAAGGGAGCAACAACTAAAGCCCACAGAGGGCACAGCTCCCAGTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGGAGCAACAACTAAAGCCCACAGAGGGCACAGCTCCCAGTGAGA  600

seq1  CAAAAATAAAAATACATTTCAGTGCTACTAAGATACTCCTGGGGTTCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAAAAATACATTTCAGTGCTACTAAGATACTCCTGGGGTTCAAG  650

seq1  GTCAGCCAGGAAGACTCTTGTGTAAAAGAAACAGGAGCTAGAGCCAGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCAGGAAGACTCTTGTGTAAAAGAAACAGGAGCTAGAGCCAGGCA  700

seq1  TGGTGGCGTAGGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCGTAGGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGA  750

seq1  TTTCTGAGTTCGAGGCCAG-CCTGGTCTACAAAGTGAGTTCTTCTCTACA  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTCTGAGTTCGAGGCCAGCCCTGGTCTACAAAGTGAGTTCTTCTCTACA  800

seq1  TAGAGAAACCCTGTCTCAGAAAAAAAGGAAGAAAGGAAAGAAAGAAAGAA  849
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  TAGAGAAACCCTGTCTCAGAAAAAAAGGAAG-AAGGAAAGAAAGAAAG-A  848

seq1  AGGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGGAAAGAAAGAAAGAAAGG  899
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  AGGAAAGAAAGAAAGAAAG-AAGGAAAGAAAGGAAAGAAAG-AAGAAAGG  896

seq1  AAAGAAAGAAAGAAAGAAAGGAAAGAAAGGAAGGAAGGAAGGAAAGAAAG  949
      |||| |||||||||   |||||||||||||| ||| |||||| ||| | |
seq2  AAAG-AAGAAAGAA--GAAGGAAAGAAAGGATGGATGGAAGGTAAGCATG  943

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  999
      |||| | ||| | | | | | ||| ||  | |  |  ||| ||| ||| |
seq2  AAAGTATGAAGGTATG-ATGTAAGTAATGATG--ACGAAGTAAGCAAGTA  990

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAGGAGCT  1049
       ||| | ||||| || |  | ||||| ||||         |||  |||||
seq2  GGAATG-AAGAATGAGAAGATGAAAGTAAGA--------GAAGGCGAGCT  1031

seq1  AGGCAGCCA-CCTCTGAACTGAAATGACC-TTTTTTTCTA-TGGAGGGCC  1096
      ||||||| | ||||||||||| ||||||| |||||||||| |||||||||
seq2  AGGCAGCTACCCTCTGAACTG-AATGACCTTTTTTTTCTATTGGAGGGCC  1080

seq1  CTGGC--AGGAACA--TTTC-TTCAT--ATGCTGACCAGC-TCTG---TA  1135
      || ||  || ||||  |||| |||||   | ||||||||| ||||   | 
seq2  CTTGCCAAGAAACAATTTTCTTTCATTATTCCTGACCAGCTTCTGGTATG  1130

seq1  TGAAGTCT-GCCTGGAACCCACTCCTCTC-TCCTTAGAAGC--TTCTGGG  1181
      |||||||| |||| | |||  ||| |||| |||||||||||   ||||||
seq2  TGAAGTCTGGCCTTG-ACCATCTCTTCTCTTCCTTAGAAGCCTCTCTGGG  1179