BAC Information

Click to search

BAC

Clone NameB6Ng01-197K06
Chromosome7 (Build37)
Map Location 107,656,294 - 107,657,296
singlet/doubletsinglet
Overlap geneDnajb13
Upstream geneArrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2
Downstream geneLOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197K06.g
ACCGA019451
length1,026
definitionB6Ng01-197K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggcaatcccctgccgcagcctcctgagtgctagggttacacc
tgtgagccagcacacttggctttgagaagcatttagatgcagactggtga
tcaccagctcttgccaggtctcagtgcttccctgggatcctgcagagaga
ggtgctgccagctcctactctgtgaaccaatgaaagcatcactctaaatg
gtagatcctggtagtgcagagaagatgccattcagagtgggttagagcag
ccaggccactctgcctttccccaggtccttctgaccgttctctgtccttt
cccatgaccatcctagacaacccgttctcaagctctctggagttacacgg
tgatagaaaggaggatttgggctggtcggtggcaactgtgagtgatcaac
aacacgccccaagctccttccctcaacctcatctacccgtatccaatgcc
tttgccttaacctgatggtagagagagagagagagagagagagagagaga
gagagagtcagacagacagacagacagacagacagagggaggatgccctt
caggtctgcttggagtactgtaatcctttgaaatccggtttattagtcta
tggcataaggtaatgcttgtcctgccctataccattaagttgagaaacag
ctaagcccttgggacagccttctgtgaatcaggctctgcactcagtgact
ttcatcctttaatttatggcccagagaggccaataaaatgctcacagttc
catagctagcgagtaatgaagttggaacttggtaccccaggaccactttg
gccacagaatctgtgcccttttgttactatgctatattgctgggggcccc
ttttgtaggcttttggagtcagaggtggctgttatgttacccctgtctct
tcagggtcagcatggaaatggtgcagtgggctttcagacattgacagctg
ggagcccagttgtcctggctcaacaagttaaggcacctttttaccacccg
ttgcctgtatctgggaagaggactgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107656294_107657296
seq2: B6Ng01-197K06.g_68_1092

seq1  GAATTCAGGGCAATCCCCTGCCGCAGCCTCCTGAGTGCTAGGGTTACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCAATCCCCTGCCGCAGCCTCCTGAGTGCTAGGGTTACACC  50

seq1  TGTGAGCCAGCACACTTGGCTTTGAGAAGCATTTAGATGCAGACTGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCAGCACACTTGGCTTTGAGAAGCATTTAGATGCAGACTGGTGA  100

seq1  TCACCAGCTCTTGCCAGGTCTCAGTGCTTCCCTGGGATCCTGCAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGCTCTTGCCAGGTCTCAGTGCTTCCCTGGGATCCTGCAGAGAGA  150

seq1  GGTGCTGCCAGCTCCTACTCTGTGAACCAATGAAAGCATCACTCTAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGCCAGCTCCTACTCTGTGAACCAATGAAAGCATCACTCTAAATG  200

seq1  GTAGATCCTGGTAGTGCAGAGAAGATGCCATTCAGAGTGGGTTAGAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCCTGGTAGTGCAGAGAAGATGCCATTCAGAGTGGGTTAGAGCAG  250

seq1  CCAGGCCACTCTGCCTTTCCCCAGGTCCTTCTGACCGTTCTCTGTCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCACTCTGCCTTTCCCCAGGTCCTTCTGACCGTTCTCTGTCCTTT  300

seq1  CCCATGACCATCCTAGACAACCCGTTCTCAAGCTCTCTGGAGTTACACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGACCATCCTAGACAACCCGTTCTCAAGCTCTCTGGAGTTACACGG  350

seq1  TGATAGAAAGGAGGATTTGGGCTGGTCGGTGGCAACTGTGAGTGATCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAAAGGAGGATTTGGGCTGGTCGGTGGCAACTGTGAGTGATCAAC  400

seq1  AACACGCCCCAAGCTCCTTCCCTCAACCTCATCTACCCGTATCCAATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGCCCCAAGCTCCTTCCCTCAACCTCATCTACCCGTATCCAATGCC  450

seq1  TTTGCCTTAACCTGATGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTAACCTGATGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  500

seq1  GAGAGAGTCAGACAGACAGACAGACAGACAGACAGAGGGAGGATGCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTCAGACAGACAGACAGACAGACAGACAGAGGGAGGATGCCCTT  550

seq1  CAGGTCTGCTTGGAGTACTGTAATCCTTTGAAATCCGGTTTATTAGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGCTTGGAGTACTGTAATCCTTTGAAATCCGGTTTATTAGTCTA  600

seq1  TGGCATAAGGTAATGCTTGTCCTGCCCTATACCATTAAGTTGAGAAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATAAGGTAATGCTTGTCCTGCCCTATACCATTAAGTTGAGAAACAG  650

seq1  CTAAGCCCTTGGGACAGCCTTCTGTGAATCAGGCTCTGCACTCAGTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCCTTGGGACAGCCTTCTGTGAATCAGGCTCTGCACTCAGTGACT  700

seq1  TTCATCC-TTAATTTATGGCCCAGAGAGGCCAATAAAATGCTCACAGTTC  749
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTTTAATTTATGGCCCAGAGAGGCCAATAAAATGCTCACAGTTC  750

seq1  CATAGCTAGCGAGTAATGAAGTTGGAAC-TGGTACCCCAGGACCAC-TTG  797
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  CATAGCTAGCGAGTAATGAAGTTGGAACTTGGTACCCCAGGACCACTTTG  800

seq1  GCCACAGAATCTGTGCCC-TTTGTTACTATGCTATATTGCTGGGG---CC  843
      |||||||||||||||||| ||||||||||||||||||||||||||   ||
seq2  GCCACAGAATCTGTGCCCTTTTGTTACTATGCTATATTGCTGGGGGCCCC  850

seq1  CTTTGTAGGC-TTTGGAGTCAGAGGTGGCTGTTATGT--ACCCTGTCTC-  889
       ||||||||| ||||||||||||||||||||||||||   ||||||||| 
seq2  TTTTGTAGGCTTTTGGAGTCAGAGGTGGCTGTTATGTTACCCCTGTCTCT  900

seq1  TCAGGGTCAGCAGGGAA--TGTGCAGTGG--CTTCAGACA-TGACAGCTG  934
      |||||||||||| ||||   |||||||||   |||||||| |||||||||
seq2  TCAGGGTCAGCATGGAAATGGTGCAGTGGGCTTTCAGACATTGACAGCTG  950

seq1  GGAG-CCAG-TGTCATGGCTCAGCAAGTAAAGGCAC--TTTTACCACCAG  980
      |||| |||| |||| ||||||| ||||| |||||||  |||||||||| |
seq2  GGAGCCCAGTTGTCCTGGCTCAACAAGTTAAGGCACCTTTTTACCACCCG  1000

seq1  -TGCCTG-AGCTGGGAAGAGGACTG  1003
       |||||| | |||||||||||||||
seq2  TTGCCTGTATCTGGGAAGAGGACTG  1025