BAC Information

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BAC

Clone NameB6Ng01-197L23
Chromosome7 (Build37)
Map Location 50,081,633 - 50,082,740
singlet/doubletsinglet
Overlap geneLOC100039706
Upstream geneEG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964
Downstream geneEG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197L23.bB6Ng01-197L23.g
ACCGA019532GA019533
length1,1091,162
definitionB6Ng01-197L23.b B6Ng01-197L23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtctgcctctgcctctctgcctctctgcctctctgcctctctg
cttctctgcctccctgcctctctgcctctctgcctctctgcctctctgcc
tctctgcctctctgcctctctgcctctctgcctctctgcctctctccctc
tctccctctatgcctctctccctctctgcctctcctcctctgcatttccc
agtctttaagaattttattcctagcaatgcaatggtggtgcacatgcctt
tatcccaacacttgggaggcagaggcaggtggatatttgagttagaggcc
agcctggtctacaaagtgagttcctggacacccagggctgtaaagagaaa
tcctgtctcaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaga
aggaggaggaggaggaggagaagaagaaagaaggaagaagaagaattatt
attatttcattccttccttaaagtgctttaatattagtttctcattagaa
taatactttctaaatctgtggcttccctcatacttggaattaacagttgc
attgtaccattgtatacctcatcctgtgtgtgtggtccagtgacttgaag
gcattcctgcaactctttgagtcttaacccttactaatcagtgagatgga
aaagagaccactgggtgagggtcctctgacttccatcccttttattgggc
atttaaaatgaaatgggacttgagacagaattgacttcactgaccaactc
tgatgctgctgtattcacagcacagagagggatgggggggacaaggacgg
gggcttttcatgtttcacagtatttggttgtcatttgcagtgagtagtca
aggtcatccaaagtttgataatcattaaaagtcctgactggccaatttgt
cagtttcataacctgggtaataaaaaactctgcctgatgaactgaactca
ttttagaaccaaaattctgtagtttcacccagtaaccaataacagaagat
atgagcagactggtgtgctcttccttaccagatgtaatactctgtctgaa
aatgcagattcaagagaaacataccggagctatacctggtgtgccgttaa
taaccttat
gaattcacaaaccaagatacaaattcacaatctcagaactgaaaaaccaa
gacacaaattcaaaatctcagaattgaaaaaccaagacacaaaatcagcg
gtgccacacttagacaacagacaacatgtaagcttcacacaaacaaacgt
acctccaaggggtcttccggagttcctggatgtcacacagatctcaatgg
ggcctccaaatgaaagaaactagtgggggaaccccccactcaactcccaa
ttcggcatgcacccaagaatcacgaacaaacaaaccaccttgatgtaaaa
acatgaggtagtttaatgacggagctccgggtcgaaaggtatctcatgaa
ggagacagtggttacgaccgtttaatggcggagctccgggtcaaaacgta
tctcacgcaggagacagtggtttcgactcatccaaatttttatacaactt
gaaagagtaattctcatcttcccatggaaaaaggtcaatcaggctataga
acttataaaggcattacaagatagcttgcctacttcatgtaaaattatta
tagatatgaaagtttattttttccatttgtaaagagtttacttctagtga
aatggtgaccattaaaggtttttgcacctaggtatggctaatatagtctt
atattatgtaagaaatttttattgtccaggcttcaatacaagaagcaaaa
agtttaaatctttcagtatatattgtttcctgagtggaaaaatattttat
tagctaatgtctctaaagggaagtttaaagttctggggaatagttgttgt
ttcataagattcagaggaaatatcttttttaatatttagggtttcagtta
tactggaaaattggtacaaatttactttaaaattttattttcaaaagctt
caaggagatgttaattagctaagacctcaccttaaactcacacagggaat
ctaagccctttgtagatgctatcaagtgagattcaattaactggtgagac
aaaagcttttaacagaaagtagaggaaacttctataatcttattgatatc
gatgtatggttgttatcagtaataggctacatattctagtatgttataat
gtgttccagctattcttggcaggaaaatacttaaatcctctttccttcac
ctcaaagagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50081633_50082740
seq2: B6Ng01-197L23.b_45_1153 (reverse)

seq1  ATAAG--TATTAAC-GCACACCAGGTATTACTCGTATAT-TTTCTCCCTG  46
      |||||  ||||||| |||||||||||||  |||   ||| ||||| | ||
seq2  ATAAGGTTATTAACGGCACACCAGGTATAGCTCCGGTATGTTTCT-CTTG  49

seq1  ATTCTGCATTTTCAGACAGGAGTAATAACATTCCTGTTAGGAAGAGCCAC  96
      | |||||||||||||||| |||| || ||| ||  || |||||||| |||
seq2  AATCTGCATTTTCAGACA-GAGT-ATTACA-TCTGGTAAGGAAGAG-CAC  95

seq1  ACCAGTCTGCTCATATCTTCTG-TATTGGTTAACTGGGTGAAACTACAGA  145
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  ACCAGTCTGCTCATATCTTCTGTTATTGGTT-ACTGGGTGAAACTACAGA  144

seq1  ATTTTGGTTTCTAAAAATGAGTTCAGTTCATCAGGCAGAG-TTTTTATTA  194
      ||||||| |||| ||||||||||||||||||||||||||| |||||||||
seq2  ATTTTGG-TTCT-AAAATGAGTTCAGTTCATCAGGCAGAGTTTTTTATTA  192

seq1  CCCAGGTTTATGAAACTGACAAATTTGCCAGTCAGGACTTTTAATGATTA  244
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  CCCAGG-TTATGAAACTGACAAATTGGCCAGTCAGGACTTTTAATGATTA  241

seq1  TCAAACTTT-GATGACC-TGACTACTCACTGCAAATGACAACCAAATACT  292
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  TCAAACTTTGGATGACCTTGACTACTCACTGCAAATGACAACCAAATACT  291

seq1  GTGAAACATG-AAAGCCCCCGTCCTTGT-CCCCCCATCCCTCTCTGTGCT  340
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  GTGAAACATGAAAAGCCCCCGTCCTTGTCCCCCCCATCCCTCTCTGTGCT  341

seq1  GTGAATACAGCAGCATCAGAGTTGGTCAGTGAAGTCAATTCTGTCTCAAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATACAGCAGCATCAGAGTTGGTCAGTGAAGTCAATTCTGTCTCAAG  391

seq1  TCCCATTTCATTTTAAATGCCCAATAAAAGGGATGGAAGTCAGAGGACCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTCATTTTAAATGCCCAATAAAAGGGATGGAAGTCAGAGGACCC  441

seq1  TCACCCAGTGGTCTCTTTTCCATCTCACTGATTAGTAAGGGTTAAGACTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAGTGGTCTCTTTTCCATCTCACTGATTAGTAAGGGTTAAGACTC  491

seq1  AAAGAGTTGCAGGAATGCCTTCAAGTCACTGGACCACACACACAGGATGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTGCAGGAATGCCTTCAAGTCACTGGACCACACACACAGGATGA  541

seq1  GGTATACAATGGTACAATGCAACTGTTAATTCCAAGTATGAGGGAAGCCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACAATGGTACAATGCAACTGTTAATTCCAAGTATGAGGGAAGCCA  591

seq1  CAGATTTAGAAAGTATTATTCTAATGAGAAACTAATATTAAAGCACTTTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTAGAAAGTATTATTCTAATGAGAAACTAATATTAAAGCACTTTA  641

seq1  AGGAAGGAATGAAATAATAATAATTCTTCTTCTTCCTTCTTTCTTCTTCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAATGAAATAATAATAATTCTTCTTCTTCCTTCTTTCTTCTTCT  691

seq1  CCTCCTCCTCCTCCTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCTCCTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  741

seq1  TTGGTTTTTGAGACAGGATTTCTCTTTACAGCCCTGGGTGTCCAGGAACT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTGAGACAGGATTTCTCTTTACAGCCCTGGGTGTCCAGGAACT  791

seq1  CACTTTGTAGACCAGGCTGGCCTCTAACTCAAATATCCACCTGCCTCTGC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTAGACCAGGCTGGCCTCTAACTCAAATATCCACCTGCCTCTGC  841

seq1  CTCCCAAGTGTTGGGATAAAGGCATGTGCACCACCATTGCATTGCTAGGA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGTGTTGGGATAAAGGCATGTGCACCACCATTGCATTGCTAGGA  891

seq1  ATAAAATTCTTAAAGACTGGGAAATGCAGAGGAGGAGAGGCAGAGAGGGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTCTTAAAGACTGGGAAATGCAGAGGAGGAGAGGCAGAGAGGGA  941

seq1  GAGAGGCATAGAGGGAGAGAGGGAGAGAGGCAGAGAGGCAGAGAGGCAGA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCATAGAGGGAGAGAGGGAGAGAGGCAGAGAGGCAGAGAGGCAGA  991

seq1  GAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGA  1041

seq1  GGCAGGGAGGCAGAGAAGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAGGCAGAGAAGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGG  1091

seq1  CAGAGGCAGACAGAATTC  1108
      ||||||||||||||||||
seq2  CAGAGGCAGACAGAATTC  1109