BAC Information

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BAC

Clone NameB6Ng01-197N09
Chromosome7 (Build37)
Map Location 30,749,859 - 30,934,056
singlet/doubletdoublet
Overlap geneLOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382
Upstream geneEif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74
Downstream geneZfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197N09.bB6Ng01-197N09.g
ACCGA019596GA019597
length1,018776
definitionB6Ng01-197N09.b B6Ng01-197N09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,933,037 - 30,934,056)(30,749,859 - 30,750,627)
sequence
gaattctagacagttgtaagataccatgtggggtctagggattgaacctg
ggacctctggaagagcaacaagggcttgagcatctctaggccaggaacta
ctcttgtcctggtttgtgagtcataaaattgtaaagacatgggacaccat
gcctggctggaacacatttttaaaagaggaaaaatgcaatacccttagta
tcctaggaaagatgttactggaagaccacaagcttccaggagctgttgtg
cgcagaactgaaggagcacacagaagaaacagggcccctggttccttgcc
tctatgcttgggacagagtgttcttgactctttctagtaacattctatca
acctcacctccatctttactcaggtatgcagataaggccaaaggtttgga
tattttaaaaaaaaattattcctctgcatgtagagtgaggggtgtccatg
tgcgtgggtgcatctgtggggtcaacttgcatgtgtcagtttttccctac
cacgtatgtcctggcttcaaactcttggtcacagctttgcagagagtgcc
ttaacgtgatgagctcaattacgagcttacagagcccaggctggcctcaa
acgtgctatgtaaccaaggatgacctcacacttgtaatactccttctctc
cctcctggaagtatgtataccacccgtggtgctgggaatcagacttagtg
cttccatgcatgctagacagggactaactcagctatattctagcaccgca
ttagtttataatttatacatggcaggtccacatgtcatgtttcactggca
caaacaaatgtgtttgggccagcacagattctgggggagactaaagggag
acaaacttcctgtaggtaaagagtgatggggcaattaagacaaaaaaagg
aaaatacccaaatatcctcagaaacaaccaggggctggcacgcagcacag
gccagggttataatccctacccttcaaaaaccgtgtgtatgtgtgtgtgc
gtgtgagagaagagaggg
gaattctgggtagcaggaagatgccagattttcacaaaagcaaaagtgag
cgaccagctaccaagcatttgaggaacaactgggtaaaagcttaggcttg
tggtgtaggaagatttgcagatcagcctaggaaaccctggggagaaacga
aggactgctttgttgtagtaaatacctctcccaaccccatagcccaaact
gcctcagccagggttatgtccacactcagctttcttttctttcttttttt
ttttttttctcttataaaccatttatttctcccggccggaaggtgggcat
cgctaccggtggataaacacagaacactacgtggagcgaggctcaaagaa
cagcggtgcaggtaagtggggccaggactcaagcgaaggtggaaccgttc
cagcccatgttggcagcgttcatgtcgtaatagttgatgtagacccggtc
cgggctgatgtgcaggcgatcggacagcaggccacacagcagcttactgt
agttgcggttctgggcaccaccgatctttgccgatgctgtgcaggctgca
aagggcgcagggatcgttcgtgccgctaaaagtcatgagctggtccggga
ccacgtgcactgcgatgtactgtgcgggctttgccggtggcctgcgccag
ctgctgggtgagctcagacagaaaccccctctggcacggaggcgtgggga
acattgggtgttcacgatgaaacataggcatggtggcggagagactgcga
gccgcggaccggaggacgtgtacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30933037_30934056
seq2: B6Ng01-197N09.b_49_1066 (reverse)

seq1  CCCTCTC-TCTCTCACACACACACACACATACACACGGTTTTTGAAGGGT  49
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  CCCTCTCTTCTCTCACACGCACACACACATACACACGGTTTTTGAAGGGT  50

seq1  AGGGATTATAACCCTGGCCTTGTGCTGCGTGCCAGCCCCTGGTTTGTTTC  99
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  AGGGATTATAACCCTGGCC-TGTGCTGCGTGCCAGCCCCTGG-TTGTTTC  98

seq1  TTGAGGATATTTGGGTATTTTCCTTTTTTTGTCTTAATTGCCCCATCACT  149
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGAGGATATTTGGGTATTTTCCTTTTTTTGTCTTAATTGCCCCATCACT  147

seq1  CTTTACCTACAGGAAGTTTGTCTCCCTTTAGTCTCCCCCAGAATCTGTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTACAGGAAGTTTGTCTCCCTTTAGTCTCCCCCAGAATCTGTGC  197

seq1  TGGCCCAAACACATTTGTTTGTGCCAGTGAAACATGACATGTGGACCTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAAACACATTTGTTTGTGCCAGTGAAACATGACATGTGGACCTGC  247

seq1  CATGTATAAATTATAAACTAATGCGGTGCTAGAATATAGCTGAGTTAGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATAAATTATAAACTAATGCGGTGCTAGAATATAGCTGAGTTAGTC  297

seq1  CCTGTCTAGCATGCATGGAAGCACTAAGTCTGATTCCCAGCACCACGGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTAGCATGCATGGAAGCACTAAGTCTGATTCCCAGCACCACGGGT  347

seq1  GGTATACATACTTCCAGGAGGGAGAGAAGGAGTATTACAAGTGTGAGGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACATACTTCCAGGAGGGAGAGAAGGAGTATTACAAGTGTGAGGTC  397

seq1  ATCCTTGGTTACATAGCACGTTTGAGGCCAGCCTGGGCTCTGTAAGCTCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGTTACATAGCACGTTTGAGGCCAGCCTGGGCTCTGTAAGCTCG  447

seq1  TAATTGAGCTCATCACGTTAAGGCACTCTCTGCAAAGCTGTGACCAAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGCTCATCACGTTAAGGCACTCTCTGCAAAGCTGTGACCAAGAG  497

seq1  TTTGAAGCCAGGACATACGTGGTAGGGAAAAACTGACACATGCAAGTTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGCCAGGACATACGTGGTAGGGAAAAACTGACACATGCAAGTTGA  547

seq1  CCCCACAGATGCACCCACGCACATGGACACCCCTCACTCTACATGCAGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGATGCACCCACGCACATGGACACCCCTCACTCTACATGCAGAG  597

seq1  GAATAATTTTTTTTTAAAATATCCAAACCTTTGGCCTTATCTGCATACCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTTTTTTTTAAAATATCCAAACCTTTGGCCTTATCTGCATACCT  647

seq1  GAGTAAAGATGGAGGTGAGGTTGATAGAATGTTACTAGAAAGAGTCAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGATGGAGGTGAGGTTGATAGAATGTTACTAGAAAGAGTCAAGA  697

seq1  ACACTCTGTCCCAAGCATAGAGGCAAGGAACCAGGGGCCCTGTTTCTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGTCCCAAGCATAGAGGCAAGGAACCAGGGGCCCTGTTTCTTCT  747

seq1  GTGTGCTCCTTCAGTTCTGCGCACAACAGCTCCTGGAAGCTTGTGGTCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTCCTTCAGTTCTGCGCACAACAGCTCCTGGAAGCTTGTGGTCTT  797

seq1  CCAGTAACATCTTTCCTAGGATACTAAGGGTATTGCATTTTTCCTCTTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAACATCTTTCCTAGGATACTAAGGGTATTGCATTTTTCCTCTTTT  847

seq1  AAAAATGTGTTCCAGCCAGGCATGGTGTCCCATGTCTTTACAATTTTATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTGTTCCAGCCAGGCATGGTGTCCCATGTCTTTACAATTTTATG  897

seq1  ACTCACAAACCAGGACAAGAGTAGTTCCTGGCCTAGAGATGCTCAAGCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAACCAGGACAAGAGTAGTTCCTGGCCTAGAGATGCTCAAGCCC  947

seq1  TTGTTGCTCTTCCAGAGGTCCCAGGTTCAATCCCTAGACCCCACATGGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCTCTTCCAGAGGTCCCAGGTTCAATCCCTAGACCCCACATGGTA  997

seq1  TCTTACAACTGTCTAGAATTC  1020
      |||||||||||||||||||||
seq2  TCTTACAACTGTCTAGAATTC  1018

seq1: chr7_30749859_30750627
seq2: B6Ng01-197N09.g_71_846

seq1  GAATTCTGGGTAGCAGGAAGATGCCAGATTTTCACAAAAGCAAAAGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTAGCAGGAAGATGCCAGATTTTCACAAAAGCAAAAGTGAG  50

seq1  CGACCAGCTACCAAGCATTTGAGGAACAACTGGGTAAAAGCTTAGGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCAGCTACCAAGCATTTGAGGAACAACTGGGTAAAAGCTTAGGCTTG  100

seq1  TGGTGTAGGAAGATTTGCAGATCAGCCTAGGAAACCCTGGGGAGAAACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTAGGAAGATTTGCAGATCAGCCTAGGAAACCCTGGGGAGAAACGA  150

seq1  AGGACTGCTTTGTTGTAGTAAATACCTCTCCCAACCCCATAGCCCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCTTTGTTGTAGTAAATACCTCTCCCAACCCCATAGCCCAAACT  200

seq1  GCCTCAGCCAGGGTTATGTCCACACTCAGCTTTCTTTTCTTTCTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGCCAGGGTTATGTCCACACTCAGCTTTCTTTTCTTTCTTTTTTT  250

seq1  TTTTTTTTCTCTTATAAACCATTTATTTCTCCCGGCCGGAAGGTGGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTCTTATAAACCATTTATTTCTCCCGGCCGGAAGGTGGGCAT  300

seq1  CGCTACCGGTGGATAAACACAGAACACTACGTGGAGCGAGGCTCAAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTACCGGTGGATAAACACAGAACACTACGTGGAGCGAGGCTCAAAGAA  350

seq1  CAGCGGTGCAGGTAAGTGGGGCCAGGACTCAAGCGAAGGTGGAACCGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGTGCAGGTAAGTGGGGCCAGGACTCAAGCGAAGGTGGAACCGTTC  400

seq1  CAGCCCATGTTGGCAGCGTTCATGTCGTAATAGTTGATGTAGACCCGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATGTTGGCAGCGTTCATGTCGTAATAGTTGATGTAGACCCGGTC  450

seq1  CGGGCTGATGTGCAGGCGATCGGACAGCAGGCCACACAGCAGCTTACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTGATGTGCAGGCGATCGGACAGCAGGCCACACAGCAGCTTACTGT  500

seq1  AGTTGCGGTTCTGGGCACCACCGATC-TTGCCGATGCTGTGCAGGCTGCA  549
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTTGCGGTTCTGGGCACCACCGATCTTTGCCGATGCTGTGCAGGCTGCA  550

seq1  GAGGGCGCAGGGATCGTTCGTGCCGCTAAAAGTCATGAGCTGGTCCGGGA  599
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCGCAGGGATCGTTCGTGCCGCTAAAAGTCATGAGCTGGTCCGGGA  600

seq1  CCACGTGCACTGCGATGTACTGTGCGGGC-TTGCCGGTGGCCTGCGCCAG  648
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCACGTGCACTGCGATGTACTGTGCGGGCTTTGCCGGTGGCCTGCGCCAG  650

seq1  CTGCTGGGTGAGCTCAGACAGAAA-CCCCTCTGGCACGGAGGCGTGGGGA  697
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGCTGGGTGAGCTCAGACAGAAACCCCCTCTGGCACGGAGGCGTGGGGA  700

seq1  ACATT-GGTGTTCACGATG-AACATAGGCATGGTGGCGGAGAGACTGCGA  745
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACATTGGGTGTTCACGATGAAACATAGGCATGGTGGCGGAGAGACTGCGA  750

seq1  G-CGTGGACCGGAGGACG-GTACAAA  769
      | || ||||||||||||| |||||||
seq2  GCCGCGGACCGGAGGACGTGTACAAA  776